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ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
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Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244


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glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chrNW_004936486:4,400,467...4,401,588 JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase ISO RGD PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chrNW_004937224:23,225...32,639 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:1351534|PMID:10625614) MGI PMID:10625614 MGI:1351534 NCBI chrNW_004936490:17,605,865...17,614,754 JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within
involved_in
ISO (MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
(PMID:29061980), (PMID:9505277)
RGD
MGI
UniProt
PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chrNW_004936594:4,125,595...4,142,261 JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
G Pygb glycogen phosphorylase B ISO RGD PMID:10634496 PMID:11071367 PMID:16226229 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chrNW_004936620:533,574...575,893 JBrowse link
G Pygl glycogen phosphorylase L ISO RGD PMID:114169 PMID:6449198 PMID:15152027 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chrNW_004936495:14,692,688...14,728,663 JBrowse link
G Pygm glycogen phosphorylase, muscle associated acts_upstream_of_or_within ISO (MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
(MGI:4844074|PMID:17689562)
RGD
MGI
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chrNW_004936599:4,551,164...4,564,109 JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chrNW_004936676:300,244...304,206 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stbd1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chrNW_004936676:300,244...304,206 JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO (PMID:1883828), (PMID:29343645) UniProt PMID:1883828 PMID:29343645 NCBI chrNW_004936478:11,971,103...12,174,489 JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Ins insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:22225877) RGD
MGI
PMID:7720853 PMID:11716774 PMID:22225877 RGD:2304267 RGD:2306167 NCBI chrNW_004936573:1,351,207...1,363,639 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936514:8,350,275...8,353,782 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12166
    metabolic process 7641
      primary metabolic process 6752
        carbohydrate metabolic process 388
          polysaccharide metabolic process 93
            polysaccharide catabolic process 19
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell wall polysaccharide catabolic process + 0
              cellular polysaccharide catabolic process + 19
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 18
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              pectin catabolic process + 0
paths to the root