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ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
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Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244


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polysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:111,290,851...111,320,566
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
G CHIT1 chitinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:203,216,079...203,229,673
Ensembl chr 1:203,212,827...203,273,641
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IBA
ISO
TAS
(PMID:21873635) GO_Central
RGD
Reactome
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:21873635 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 Reactome:R-HSA-70221 NCBI chr 1:99,850,077...99,924,023
Ensembl chr 1:99,850,361...99,924,023
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1351534|PMID:10625614) Ensembl
MGI
PMID:10625614 GO_REF:0000107 MGI:1351534 NCBI chr17:42,900,799...42,914,438
Ensembl chr17:42,900,797...42,914,438
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
TAS
(PMID:21873635)
(MGI:2179452|PMID:10838256)
(MGI:2136118|PMID:11328962)
(MGI:2157196|PMID:11785984)
(PMID:29061980), (PMID:9505277)
GO_Central
MGI
RGD
UniProt
Reactome
PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:21873635 PMID:29061980 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 Reactome:R-HSA-70221 NCBI chr17:80,101,535...80,119,881
Ensembl chr17:80,101,556...80,119,881
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4356361|PMID:19696889) Ensembl
MGI
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr12:48,105,353...48,146,404
Ensembl chr12:48,105,139...48,146,404
JBrowse link
G PYGB glycogen phosphorylase B involved_in IBA
ISO
NAS
(PMID:21873635)
(PMID:3346228)
GO_Central
RGD
UniProt
PMID:3346228 PMID:10634496 PMID:11071367 PMID:16226229 PMID:21873635 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr20:25,248,039...25,298,012
Ensembl chr20:25,248,085...25,298,012
JBrowse link
G PYGL glycogen phosphorylase L involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:114169 PMID:6449198 PMID:15152027 PMID:21873635 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr14:50,905,217...50,944,483
Ensembl chr14:50,857,891...50,944,483
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4844074|PMID:17689562)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
GO_Central
MGI
RGD
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 PMID:21873635 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr11:64,746,389...64,760,715
Ensembl chr11:64,746,389...64,759,974
JBrowse link
G STBD1 starch binding domain 1 involved_in IMP (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4356361|PMID:19696889) Ensembl
MGI
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr12:48,105,353...48,146,404
Ensembl chr12:48,105,139...48,146,404
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:52,622,458...52,714,466
Ensembl chr 8:52,622,458...52,745,843
JBrowse link
G STBD1 starch binding domain 1 involved_in IMP (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:76,306,733...76,311,130
Ensembl chr 4:76,306,733...76,311,130
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in IBA
IDA
(PMID:21873635)
(PMID:1883828), (PMID:29343645)
GO_Central
UniProt
PMID:1883828 PMID:21873635 PMID:29343645 NCBI chr 7:36,509,313...36,724,544
Ensembl chr 7:36,512,941...36,724,549
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 5:159,916,482...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G INS insulin involved_in IMP (PMID:381941) BHF-UCL PMID:381941 NCBI chr11:2,159,779...2,161,209
Ensembl chr11:2,159,779...2,161,221
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 5:159,916,482...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G HMGB1 high mobility group box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1339514|PMID:10391216) Ensembl
MGI
PMID:10391216 GO_REF:0000107 MGI:1339514 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in TAS (PMID:10487978) UniProt PMID:10487978 NCBI chr16:30,748,425...30,761,176
Ensembl chr16:30,748,293...30,761,176
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA
ISO
Ensembl
RGD
PMID:7720853 GO_REF:0000107 RGD:2304267 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA
ISO
Ensembl
RGD
PMID:7720853 GO_REF:0000107 RGD:2304267 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B acts_upstream_of_or_within ISO
IDA
(PMID:22225877) RGD
MGI
PMID:7720853 PMID:11716774 PMID:22225877 RGD:2304267 RGD:2306167 NCBI chr 8:9,136,255...9,151,586
Ensembl chr 8:9,136,255...9,151,574
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr10:91,628,442...91,633,071
Ensembl chr10:91,628,442...91,633,071
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IEA
ISO
Ensembl
RGD
PMID:11716774 GO_REF:0000107 RGD:2306167 NCBI chr20:59,936,663...59,940,305
Ensembl chr20:59,936,663...59,940,305
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr14:23,295,652...23,302,859
Ensembl chr14:23,295,652...23,302,859
JBrowse link
starch catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAM maltase-glucoamylase involved_in TAS (PMID:9446624) PINC PMID:9446624 NCBI chr 7:141,986,517...142,106,747
Ensembl chr 7:141,907,813...142,106,747
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18534
    metabolic process 11862
      primary metabolic process 10570
        carbohydrate metabolic process 665
          polysaccharide metabolic process 120
            polysaccharide catabolic process 24
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell wall polysaccharide catabolic process + 0
              cellular polysaccharide catabolic process + 22
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 21
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              pectin catabolic process + 0
paths to the root