Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
go back to main search page
Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244


show annotations for term's descendants           Sort by:
 
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA
ISO
InterPro
RGD
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 GO_REF:0000002 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 6:50,039,661...50,112,543
Ensembl chr 6:50,041,947...50,112,279
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:1351534|PMID:10625614) MGI PMID:10625614 MGI:1351534 NCBI chr 9:20,132,973...20,143,642
Ensembl chr 9:20,132,978...20,143,642
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
GO_Central
MGI
RGD
PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 PMID:21873635 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chr 9:1,601,092...1,615,582
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chr27:6,620,300...6,640,649
Ensembl chr27:6,620,300...6,663,670
JBrowse link
G PYGB glycogen phosphorylase B ISO RGD PMID:10634496 PMID:11071367 PMID:16226229 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr23:1,440,826...1,494,570
Ensembl chr23:1,420,052...1,496,245
JBrowse link
G PYGL glycogen phosphorylase L ISO RGD PMID:114169 PMID:6449198 PMID:15152027 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr 8:27,264,778...27,307,977
Ensembl chr 8:27,223,273...27,307,977
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
(MGI:4844074|PMID:17689562)
GO_Central
MGI
RGD
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 PMID:21873635 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr18:52,398,192...52,410,731
Ensembl chr18:52,398,056...52,410,464
JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr32:932,245...953,070
Ensembl chr32:951,698...952,897
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chr27:6,620,300...6,640,649
Ensembl chr27:6,620,300...6,663,670
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:4,445,668...4,544,223
Ensembl chr29:4,375,785...4,517,168
JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr32:932,245...953,070
Ensembl chr32:951,698...952,897
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in ISO (PMID:1883828), (PMID:29343645) UniProt PMID:1883828 PMID:29343645 NCBI chr14:47,893,659...48,052,809
Ensembl chr14:47,894,806...48,053,301
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999
JBrowse link
G INS insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:22225877) RGD
MGI
PMID:7720853 PMID:11716774 PMID:22225877 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13872
    metabolic process 8970
      primary metabolic process 7906
        carbohydrate metabolic process 473
          polysaccharide metabolic process 102
            polysaccharide catabolic process 20
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell wall polysaccharide catabolic process + 0
              cellular polysaccharide catabolic process + 20
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 19
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              pectin catabolic process + 0
paths to the root