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ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
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Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244


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glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr10:110,642,491...110,646,595 JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase ISO RGD PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 1:102,506,234...102,580,183
Ensembl chr 1:101,226,120...101,299,511
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:1351534|PMID:10625614) MGI PMID:10625614 MGI:1351534 NCBI chr17:14,407,355...14,419,660
Ensembl chr17:14,635,667...14,646,674
JBrowse link
G GAA alpha glucosidase acts_upstream_of_or_within
involved_in
ISO (MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
(MGI:2179452|PMID:10838256)
(PMID:29061980), (PMID:9505277)
RGD
MGI
UniProt
PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chr17:74,188,296...74,206,593
Ensembl chr17:79,723,699...79,741,839
JBrowse link
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
G PYGB glycogen phosphorylase B ISO RGD PMID:10634496 PMID:11071367 PMID:16226229 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr20:25,191,066...25,242,955
Ensembl chr20:25,593,589...25,648,066
JBrowse link
G PYGL glycogen phosphorylase L ISO RGD PMID:114169 PMID:6449198 PMID:15152027 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr14:31,494,172...31,533,545
Ensembl chr14:49,746,309...49,832,786
JBrowse link
G PYGM glycogen phosphorylase, muscle associated acts_upstream_of_or_within ISO (MGI:4844074|PMID:17689562)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
RGD
MGI
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr11:60,101,810...60,115,813
Ensembl chr11:63,443,609...63,457,430
JBrowse link
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:47,889,830...47,894,943
Ensembl chr 4:53,729,242...53,734,492
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STBD1 starch binding domain 1 involved_in ISO (PMID:20810658) GO_Central PMID:20810658 NCBI chr 4:47,889,830...47,894,943
Ensembl chr 4:53,729,242...53,734,492
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in ISO (PMID:1883828), (PMID:29343645) UniProt PMID:1883828 PMID:29343645 NCBI chr 7:37,138,486...37,362,655
Ensembl chr 7:37,363,741...37,589,358
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 5:155,307,148...155,363,785
Ensembl chr 5:161,923,895...161,979,461
JBrowse link
G INS insulin involved_in ISO (PMID:381941) BHF-UCL PMID:381941 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 5:155,307,148...155,363,785
Ensembl chr 5:161,923,895...161,979,461
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:22225877) RGD
MGI
PMID:7720853 PMID:11716774 PMID:22225877 RGD:2304267 RGD:2306167 NCBI chr 8:10,059,531...10,074,820 JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr10:88,377,396...88,382,205
Ensembl chr10:91,900,112...91,904,764
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr20:56,292,457...56,295,977 JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr14:4,118,827...4,122,294
Ensembl chr14:22,215,635...22,216,794
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12652
    metabolic process 7925
      primary metabolic process 6985
        carbohydrate metabolic process 401
          polysaccharide metabolic process 95
            polysaccharide catabolic process 19
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell wall polysaccharide catabolic process + 0
              cellular polysaccharide catabolic process + 19
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 18
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              pectin catabolic process + 0
paths to the root