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ONTOLOGY REPORT - ANNOTATIONS


Term:allantoin metabolic process
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Accession:GO:0000255 term browser browse the term
Definition:The chemical reactions and pathways involving allantoin, (2,5-dioxo-4-imidazolidinyl)urea, an intermediate or end product of purine catabolism.
Synonyms:exact_synonym: allantoin metabolism


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allantoin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO MGI:1857117 (MGI:3640719|PMID:10720488), (MGI:6478540|PMID:16742956), (MGI:6478860|PMID:8064675) RGD PMID:8064675 PMID:10720488 PMID:16742956 MGI:3640719 MGI:6478540 MGI:6478860 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in IDA PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr 9:14,481,296...14,484,034
Ensembl chr 9:14,481,066...14,484,022
JBrowse link
G Gda guanine deaminase involved_in ISO
IEA
(MGI:6478860|PMID:8064675)
GO_REF:0000107
RGD
Ensembl
PMID:8064675 GO_REF:0000107 MGI:6478860 NCBI chr 1:218,903,045...218,982,360
Ensembl chr 1:218,906,815...218,982,416
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516), (MGI:55510|PMID:6301357) RGD PMID:6301357 PMID:10681516 MGI:1353788 MGI:55510 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO
IEA
(PMID:11133996)
GO_REF:0000107
RGD
Ensembl
PMID:11133996 GO_REF:0000107 NCBI chr 5:135,473,107...135,494,400
Ensembl chr 5:135,473,231...135,499,338
JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) RGD PMID:11690631 MGI:2153435 NCBI chr 6:33,139,053...33,156,489
Ensembl chr 6:33,139,064...33,156,481
JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407)
(PMID:21873433)
RGD PMID:5560407 PMID:21873433 MGI:6478530 NCBI chr 1:245,770,993...245,896,925
Ensembl chr 1:245,772,277...245,897,913
JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO
IEA
(PMID:6771276)
GO_REF:0000107
RGD
Ensembl
PMID:6771276 GO_REF:0000107 NCBI chr15:24,170,456...24,178,274
Ensembl chr15:24,170,602...24,203,986
JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO
IEA
(MGI:3665448|PMID:16462750)
GO_REF:0000002
RGD
InterPro
PMID:16462750 GO_REF:0000002 MGI:3665448 NCBI chr12:7,709,233...7,718,925
Ensembl chr12:7,709,312...7,718,923
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IDA
IEA
MGI:2448161 (MGI:2447927|PMID:12502743), (MGI:49329|PMID:1590774), (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898), (MGI:6478860|PMID:8064675)
PMID:3443108
GO_REF:0000107
(PMID:1619276)
RGD
Ensembl
PMID:1590774 PMID:1619276 PMID:8064675 PMID:8226898 PMID:12502743 More... GO_REF:0000107 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 MGI:6478860, RGD:42721989 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 6:45,179,181...45,214,275
Ensembl chr 6:45,179,187...45,214,223
JBrowse link
G Dcdc2c doublecortin domain containing 2C involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:45,103,838...45,179,040
Ensembl chr 6:45,061,553...45,178,046
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      cellular metabolic process 10721
        heterocycle metabolic process 5522
          allantoin metabolic process 13
            allantoin biosynthetic process 0
            allantoin catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      nitrogen compound metabolic process 9983
        cellular nitrogen compound metabolic process 6563
          cellular amide metabolic process 1529
            allantoin metabolic process 13
              allantoin biosynthetic process 0
              allantoin catabolic process + 2
paths to the root