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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear chromosome
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Accession:GO:0000228 term browser browse the term
Definition:A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.
Synonyms:narrow_synonym: nuclear interphase chromosome


show annotations for term's descendants           Sort by:
nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,584,028...61,872,341
Ensembl chr  X:61,584,848...61,872,287 		JBrowse link
G BAZ1A bromodomain adjacent to zinc finger domain 1A is_active_in
located_in		 IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:64,969,626...65,069,969
Ensembl chr 7:64,969,640...65,069,889 		JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 located_in ISO (PMID:16322459) UniProt PMID:16322459 NCBI chr12:3,747,276...3,755,214
Ensembl chr12:3,747,279...3,755,215 		JBrowse link
G BLM BLM RecQ like helicase located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,317,515...53,412,649
Ensembl chr 7:53,317,540...53,412,645 		JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 is_active_in
located_in		 ISO
IEA		 (PMID:9326634) GO_Central
Ensembl		 PMID:9326634 GO_REF:0000107 NCBI chr 2:105,113,149...105,205,303
Ensembl chr 2:105,113,668...105,203,119 		JBrowse link
G E2F1 E2F transcription factor 1 located_in ISO PMID:24250814 UniProt PMID:24250814 RGD:151356618 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,599...37,189,883 		JBrowse link
G EXOSC9 exosome component 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,278,164 		JBrowse link
G FIGNL1 fidgetin like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:136,484,217...136,488,262
Ensembl chr 9:136,484,216...136,488,250 		JBrowse link
G GINS2 GINS complex subunit 2 located_in IEA UniProt GO_REF:0000117 NCBI chr 6:3,218,655...3,252,740
Ensembl chr 6:3,218,702...3,243,899 		JBrowse link
G HCFC1 host cell factor C1 located_in ISO PMID:24250814 UniProt PMID:24250814 RGD:151356618 NCBI chr  X:124,673,125...124,694,846
Ensembl chr  X:124,673,128...124,694,152 		JBrowse link
G HMGA2 high mobility group AT-hook 2 located_in ISO (PMID:11555636) MGI PMID:11555636 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030 		JBrowse link
G IK IK cytokine located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,361,134...142,376,335
Ensembl chr 2:142,361,155...142,376,333 		JBrowse link
G LOC100359361 high mobility group AT-hook 2-like located_in ISS UniProt GO_REF:0000024 NCBI chr 1:191,094,785...191,105,394 JBrowse link
G MACROH2A1 macroH2A.1 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886 		JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,136,505...64,167,410
Ensembl chr 5:64,136,505...64,167,410 		JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in ISO (PMID:19393617) UniProt PMID:19393617 NCBI chr14:13,965,733...14,041,841
Ensembl chr14:13,967,070...14,041,788 		JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136 		JBrowse link
G SETX senataxin located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,093,449...272,170,857
Ensembl chr 1:272,095,358...272,170,747 		JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 located_in IEA InterPro GO_REF:0000002 NCBI chr14:49,874,981...49,906,043
Ensembl chr14:49,874,984...49,906,048 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:245,409,559...245,459,032
Ensembl chr 1:245,410,147...245,475,929 		JBrowse link
G SPIDR scaffold protein involved in DNA repair located_in
is_active_in		 IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:79,874,937...80,190,744
Ensembl chr 4:79,874,831...80,190,655 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks is_active_in
located_in		 IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:57,730,676...57,745,875
Ensembl chr17:57,730,675...57,745,875 		JBrowse link
G TOP1 DNA topoisomerase I located_in ISO (PMID:9049244) UniProt PMID:9049244 NCBI chr17:43,710,270...43,799,700
Ensembl chr17:43,710,290...43,799,700 		JBrowse link
G TOP2A DNA topoisomerase II alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,282...22,028,450 		JBrowse link
G ZBTB32 zinc finger and BTB domain containing 32 located_in ISO (PMID:11555636) MGI PMID:11555636 NCBI chr 6:45,140,573...45,145,903
Ensembl chr 6:45,142,262...45,145,898 		JBrowse link
alpha DNA polymerase:primase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit part_of
located_in		 ISO
IEA		 (PMID:26975377) RGD
TreeGrafter
Ensembl
ComplexPortal		 PMID:7670930 PMID:26975377 GO_REF:0000107 GO_REF:0000118 RGD:1580605 NCBI chr  X:20,756,674...21,064,265
Ensembl chr  X:20,756,725...21,062,175 		JBrowse link
G POLA2 DNA polymerase alpha 2, accessory subunit located_in
part_of		 ISO
IEA		 (PMID:26975377) ComplexPortal
TreeGrafter
Ensembl		 PMID:26975377 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:6,922,384...6,950,289
Ensembl chr 2:6,922,387...6,950,179 		JBrowse link
G PRIM1 DNA primase subunit 1 located_in
part_of		 ISO
IEA
IBA		 (PMID:26975377) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:26975377 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:22,064,248...22,089,441
Ensembl chr 5:22,062,989...22,089,436 		JBrowse link
G PRIM2 DNA primase subunit 2 located_in
part_of		 ISO
IEA		 (PMID:26975377) ComplexPortal
TreeGrafter
UniProt
Ensembl		 PMID:26975377 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 7:28,274,626...28,566,633
Ensembl chr 7:28,274,627...28,631,514 		JBrowse link
Barr body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2AZ1 H2A.Z variant histone 1 NOT|located_in ISO (PMID:11331621) MGI PMID:11331621 NCBI chr 8:120,563,752...120,566,023
Ensembl chr 8:120,563,752...120,566,177 		JBrowse link
G H3-3A H3.3 histone A located_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,939,938...13,947,976
Ensembl chr10:13,923,077...13,948,484 		JBrowse link
G H3-3B H3.3 histone B located_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,632,326...5,634,977
Ensembl chr12:5,632,365...5,634,726 		JBrowse link
G LRIF1 ligand dependent nuclear receptor interacting factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,271,562...109,292,313
Ensembl chr 4:109,271,728...109,292,310 		JBrowse link
G MACROH2A1 macroH2A.1 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,534,138...137,623,886 		JBrowse link
G MACROH2A2 macroH2A.2 histone located_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,002,385...73,055,228
Ensembl chr14:73,003,117...73,055,229 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:103,809,732...103,986,057
Ensembl chr 6:103,808,066...103,965,335 		JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1H14orf39 chromosome 1 C14orf39 homolog located_in
is_active_in		 IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:189,330,137...189,471,874
Ensembl chr 1:189,407,490...189,470,541 		JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821 		JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in ISO (MGI:3581466|PMID:15944401), (PMID:22164254) MGI PMID:15944401 PMID:22164254 MGI:3581466 NCBI chr14:141,726,708...141,737,830
Ensembl chr14:141,726,208...141,735,919 		JBrowse link
G SYCE2 synaptonemal complex central element protein 2 located_in IEA InterPro GO_REF:0000002 NCBI chr 2:66,118,439...66,133,454
Ensembl chr 2:66,128,492...66,131,963 		JBrowse link
G SYCE3 synaptonemal complex central element protein 3 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:168,908...201,037
Ensembl chr 5:181,056...200,832 		JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398 		JBrowse link
G TEX11 testis expressed 11 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779 		JBrowse link
G TEX12 testis expressed 12 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:39,864,093...39,869,572
Ensembl chr 9:39,864,148...39,869,979 		JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HUS1 HUS1 checkpoint clamp component part_of IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:48,522,914...48,539,267
Ensembl chr18:48,522,998...48,534,682 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease part_of IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr16:20,491,851...20,512,198
Ensembl chr16:20,466,889...20,512,135 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A part_of IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:5,123,142...5,129,740
Ensembl chr 2:5,123,134...5,129,703 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B part_of IEA
IBA		 UniProt
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr14:31,869,570...31,903,485
Ensembl chr14:31,869,684...31,903,823 		JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125 		JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757 		JBrowse link
CMG complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr14:51,133,111...51,158,604
Ensembl chr14:51,133,408...51,158,606 		JBrowse link
G GINS1 GINS complex subunit 1 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr17:31,060,540...31,076,807
Ensembl chr17:31,060,650...31,080,314 		JBrowse link
G GINS2 GINS complex subunit 2 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr 6:3,218,655...3,252,740
Ensembl chr 6:3,218,702...3,243,899 		JBrowse link
G GINS3 GINS complex subunit 3 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr 6:20,162,264...20,170,385
Ensembl chr 6:20,162,636...20,170,258 		JBrowse link
G GINS4 GINS complex subunit 4 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr17:10,656,869...10,668,664
Ensembl chr17:10,656,884...10,668,664 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr13:72,630,378...72,651,270
Ensembl chr13:72,630,380...72,657,786 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr 7:46,084,648...46,104,425
Ensembl chr 7:46,084,662...46,104,375 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr 4:79,674,737...79,686,964
Ensembl chr 4:79,674,739...79,686,685 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107
G MCM6 minichromosome maintenance complex component 6 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr15:15,923,638...15,978,587
Ensembl chr15:15,923,681...15,985,405 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 located_in
part_of		 ISO
IEA		 (PMID:22474384) ComplexPortal
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr 3:8,005,890...8,014,047
Ensembl chr 3:8,005,900...8,014,053 		JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125 		JBrowse link
G ADD3 adducin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:120,451,421...120,583,725
Ensembl chr14:120,451,575...120,583,722 		JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668 		JBrowse link
G BRD4 bromodomain containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,250,958...62,345,851
Ensembl chr 2:62,250,989...62,345,362 		JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,553,680...78,576,057
Ensembl chr 7:78,564,122...78,575,462 		JBrowse link
G CDX2 caudal type homeobox 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CHEK1 checkpoint kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,759,224...52,790,878
Ensembl chr 9:52,753,528...52,790,700 		JBrowse link
G CHMP1A charged multivesicular body protein 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,866...358,653 		JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:9,431,236...9,470,333
Ensembl chr 5:9,431,177...9,470,113 		JBrowse link
G DNMT3L DNA methyltransferase 3 like located_in IEA Ensembl GO_REF:0000107 NCBI chr13:207,119,025...207,141,990
Ensembl chr13:207,119,051...207,132,538 		JBrowse link
G H1-6 H1.6 linker histone, cluster member located_in ISO (PMID:18316482) MGI PMID:18316482 NCBI chr 7:20,774,135...20,777,244
Ensembl chr 7:20,775,859...20,776,497 		JBrowse link
G H2AX H2A.X variant histone located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,308,824...46,310,494
Ensembl chr 9:46,309,653...46,310,084 		JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,447,298...98,469,650
Ensembl chr 4:98,449,891...98,469,650 		JBrowse link
G IHO1 interactor of HORMAD1 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:31,802,963...31,836,911
Ensembl chr13:31,802,948...31,837,912 		JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,922,032...81,105,135
Ensembl chr 4:80,921,682...81,108,360 		JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr12:40,153,105...40,205,077
Ensembl chr12:40,153,397...40,183,622 		JBrowse link
G LRPPRC leucine rich pentatricopeptide repeat containing located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143 		JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chr 9:26,572,352...26,634,596
Ensembl chr 9:26,572,361...26,634,567 		JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233 		JBrowse link
G NCAPD2 non-SMC condensin I complex subunit D2 located_in ISO (MGI:5644098|PMID:25474630) ComplexPortal PMID:25474630 MGI:5644098 NCBI chr 5:64,136,505...64,167,410
Ensembl chr 5:64,136,505...64,167,410 		JBrowse link
G NCAPD3 non-SMC condensin II complex subunit D3 located_in ISO (MGI:5644098|PMID:25474630) ComplexPortal PMID:25474630 MGI:5644098 NCBI chr 9:60,712,416...60,785,907
Ensembl chr 9:60,712,421...60,785,901 		JBrowse link
G NCAPG non-SMC condensin I complex subunit G located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:12,759,225...12,807,164
Ensembl chr 8:12,759,641...12,807,163 		JBrowse link
G NCAPG2 non-SMC condensin II complex subunit G2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:653,182...713,825
Ensembl chr18:653,224...717,200 		JBrowse link
G NCAPH non-SMC condensin I complex subunit H located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,852,388...46,893,008
Ensembl chr 3:46,852,392...46,893,013 		JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:222,784...233,491
Ensembl chr 5:221,471...233,475 		JBrowse link
G NEK2 NIMA related kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,547,044...131,560,527
Ensembl chr 9:131,547,069...131,561,095 		JBrowse link
G NIFK nucleolar protein interacting with the FHA domain of MKI67 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,719,024...29,734,811
Ensembl chr15:29,714,297...29,754,978 		JBrowse link
G NOL6 nucleolar protein 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,022,035...33,035,201
Ensembl chr10:33,022,035...33,035,200 		JBrowse link
G PSMC3IP PSMC3 interacting protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:20,244,243...20,250,151
Ensembl chr12:20,244,304...20,250,159 		JBrowse link
G RAD21 RAD21 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,772,821...21,802,453
Ensembl chr 4:21,772,855...21,802,715 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in ISO (PMID:24797475) MGI PMID:24797475 NCBI chr17:34,035,526...34,064,215 JBrowse link
G RAD50 RAD50 double strand break repair protein is_active_in
located_in		 ISO
IBA
IEA		 sex vesicles/chromatin of XY bivalent RGD
GO_Central
TreeGrafter		 PMID:10855503 GO_REF:0000033 GO_REF:0000118 RGD:2300257 NCBI chr 2:134,844,460...134,939,188
Ensembl chr 2:134,700,817...134,939,189 		JBrowse link
G RAD51 RAD51 recombinase located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136 		JBrowse link
G RCC1 regulator of chromosome condensation 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,540,766...85,565,869
Ensembl chr 6:85,546,024...85,565,866 		JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537 		JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:18283110), (PMID:18316482), (PMID:20551173), (PMID:22164254) MGI PMID:18283110 PMID:18316482 PMID:20551173 PMID:22164254 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741 		JBrowse link
G RRS1 ribosome biogenesis regulator 1 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,285,803...68,288,213
Ensembl chr 4:68,285,803...68,288,195 		JBrowse link
G RSPH1 radial spoke head component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:205,808,923...205,827,098
Ensembl chr13:205,808,671...205,827,213 		JBrowse link
G SHOC1 shortage in chiasmata 1 located_in
is_active_in		 IEA
IBA		 InterPro
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:252,465,893...252,555,063
Ensembl chr 1:252,466,222...252,562,066 		JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:245,409,559...245,459,032
Ensembl chr 1:245,410,147...245,475,929 		JBrowse link
G SMC4 structural maintenance of chromosomes 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:100,078,149...100,120,907
Ensembl chr13:100,078,272...100,117,309 		JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889 		JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,273,136...9,293,258
Ensembl chr 5:9,273,240...9,293,254 		JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398 		JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:18316482), (PMID:21621532), (PMID:22863743), (PMID:24589552), (PMID:24891606) MGI PMID:18316482 PMID:21621532 PMID:22863743 PMID:24589552 PMID:24891606 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656 		JBrowse link
G TEX11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:74,768,251...74,846,377
Ensembl chr13:74,768,257...74,846,340 		JBrowse link
G TTN titin located_in ISO (PMID:9548712) BHF-UCL PMID:9548712 NCBI chr15:84,226,953...84,501,320 JBrowse link
G TUBG1 tubulin gamma 1 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,211,002...20,221,103 JBrowse link
delta DNA polymerase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit part_of
located_in		 ISO
IEA		 (PMID:12403614) RGD
TreeGrafter
UniProt
Ensembl
ComplexPortal		 PMID:10541966 PMID:12403614 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:729526 NCBI chr 6:55,247,799...55,272,087
Ensembl chr 6:55,247,880...55,272,085 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit part_of
located_in		 ISO
IBA
IEA		 (PMID:12403614) RGD
GO_Central
TreeGrafter
UniProt
Ensembl
ComplexPortal		 PMID:10541966 PMID:12403614 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:729526 NCBI chr18:51,038,272...51,046,782
Ensembl chr18:51,038,358...51,046,779 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit located_in
part_of		 ISO
IEA
IBA		 (PMID:12403614) ComplexPortal
TreeGrafter
GO_Central
InterPro		 PMID:12403614 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:8,906,491...8,956,845
Ensembl chr 9:8,906,462...8,958,318 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit located_in
part_of		 ISO
IEA
IBA		 (PMID:12403614) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:12403614 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:5,160,906...5,162,753
Ensembl chr 2:5,160,955...5,164,266 		JBrowse link
DNA replication factor A complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAS2 BCAS2 pre-mRNA processing factor part_of
located_in		 IEA
ISO		 (PMID:24332808) Ensembl
UniProt		 PMID:24332808 GO_REF:0000107 NCBI chr 4:105,992,558...106,003,160
Ensembl chr 4:105,992,452...106,003,150 		JBrowse link
G CDC5L cell division cycle 5 like part_of
located_in		 IEA
ISO		 (PMID:24332808) Ensembl
UniProt		 PMID:24332808 GO_REF:0000107 NCBI chr 7:39,384,397...39,427,729
Ensembl chr 7:39,384,556...39,431,248 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease located_in ISO (PMID:7700386) UniProt PMID:7700386 NCBI chr11:71,141,823...71,168,326
Ensembl chr11:71,141,842...71,168,322 		JBrowse link
G HELB DNA helicase B part_of
located_in		 IEA
ISO		 (PMID:26774285) Ensembl
UniProt		 PMID:26774285 GO_REF:0000107 NCBI chr 5:30,645,378...30,696,488
Ensembl chr 5:30,645,656...30,697,232 		JBrowse link
G PLRG1 pleiotropic regulator 1 located_in ISO (PMID:24332808) UniProt PMID:24332808 NCBI chr 8:74,614,925...74,631,072
Ensembl chr 8:74,614,893...74,633,102 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 part_of
located_in		 IEA
ISO		 (PMID:24332808) Ensembl
UniProt		 PMID:24332808 GO_REF:0000107 NCBI chr 2:10,851,779...10,860,315
Ensembl chr 2:10,851,579...10,860,836 		JBrowse link
G RPA1 replication protein A1 part_of
located_in		 ISO
IEA
IBA		 (PMID:11927569), (PMID:7760808) RGD
TreeGrafter
GO_Central
Ensembl
ComplexPortal		 PMID:7503737 PMID:7760808 PMID:8463251 PMID:11927569 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2307012 RGD:2307013 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741 		JBrowse link
G RPA2 replication protein A2 part_of
located_in		 ISO
IBA
IEA		 (PMID:11927569) RGD
GO_Central
TreeGrafter
Ensembl
ComplexPortal		 PMID:7503737 PMID:8463251 PMID:11927569 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2307012 RGD:2307013 NCBI chr 6:85,032,604...85,045,899
Ensembl chr 6:85,031,582...85,045,915 		JBrowse link
G RPA3 replication protein A3 part_of
located_in		 ISO
IEA		 (PMID:11927569), (PMID:7760808) RGD
TreeGrafter
Ensembl
ComplexPortal		 PMID:7503737 PMID:7760808 PMID:11927569 GO_REF:0000107 GO_REF:0000118 RGD:2307013 NCBI chr 9:77,910,876...77,914,872
Ensembl chr 9:77,910,881...77,937,060 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 part_of
located_in		 IEA
ISO		 (PMID:19793862), (PMID:19793863) Ensembl
UniProt		 PMID:19793862 PMID:19793863 GO_REF:0000107 NCBI chr15:118,627,734...118,688,005
Ensembl chr15:118,627,467...118,688,397 		JBrowse link
G TONSL tonsoku like, DNA repair protein part_of
located_in		 IEA
ISO		 (PMID:21055983) Ensembl
UniProt		 PMID:21055983 GO_REF:0000107 NCBI chr 4:349,992...361,749
Ensembl chr 4:350,060...362,167 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor part_of
located_in		 IEA
ISO		 (PMID:7700386) Ensembl
UniProt		 PMID:7700386 GO_REF:0000107 NCBI chr 1:239,532,331...239,568,589
Ensembl chr 1:239,532,272...239,568,570 		JBrowse link
epsilon DNA polymerase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLE DNA polymerase epsilon, catalytic subunit located_in
part_of		 ISO
IBA
IEA		 (PMID:10801849) ComplexPortal
GO_Central
TreeGrafter
Ensembl
InterPro		 PMID:10801849 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:22,798,146...22,852,818
Ensembl chr14:22,798,192...22,853,547 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit located_in
part_of		 ISO
IEA		 (PMID:10801849) ComplexPortal
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:10801849 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:179,495,278...179,529,891
Ensembl chr 1:179,495,214...179,529,896 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit located_in
part_of		 ISO
IEA		 (PMID:10801849) ComplexPortal
TreeGrafter
Ensembl		 PMID:10801849 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:254,033,378...254,036,224
Ensembl chr 1:254,033,385...254,035,978 		JBrowse link
G POLE4 DNA polymerase epsilon 4, accessory subunit located_in
part_of		 ISO
IEA		 (PMID:10801849) ComplexPortal
TreeGrafter
Ensembl		 PMID:10801849 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:68,103,028...68,117,308
Ensembl chr 3:68,098,587...68,117,278 		JBrowse link
GINS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS1 GINS complex subunit 1 located_in
part_of		 ISO
IEA
IBA		 (PMID:17417653) ComplexPortal
TreeGrafter
GO_Central
UniProt
InterPro
Ensembl		 PMID:17417653 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr17:31,060,540...31,076,807
Ensembl chr17:31,060,650...31,080,314 		JBrowse link
G GINS2 GINS complex subunit 2 located_in
part_of		 ISO
IBA
IEA		 (PMID:17417653) ComplexPortal
GO_Central
TreeGrafter
Ensembl		 PMID:17417653 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:3,218,655...3,252,740
Ensembl chr 6:3,218,702...3,243,899 		JBrowse link
G GINS3 GINS complex subunit 3 located_in
part_of		 ISO
IEA		 (PMID:17417653) ComplexPortal
TreeGrafter
UniProt
Ensembl		 PMID:17417653 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:20,162,264...20,170,385
Ensembl chr 6:20,162,636...20,170,258 		JBrowse link
G GINS4 GINS complex subunit 4 located_in
part_of		 ISO
IEA
IBA		 (PMID:17417653) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:17417653 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:10,656,869...10,668,664
Ensembl chr17:10,656,884...10,668,664 		JBrowse link
G SLC5A8 solute carrier family 5 member 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:82,973,179...83,088,542
Ensembl chr 5:82,973,284...83,031,157 		JBrowse link
Ino80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A located_in
part_of		 ISO
IEA		 (PMID:21303910) ComplexPortal
Ensembl		 PMID:21303910 GO_REF:0000107 NCBI chr13:117,598,415...117,627,311
Ensembl chr13:117,598,496...117,628,488 		JBrowse link
G ACTR5 actin related protein 5 located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:21303910 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:41,702,273...41,724,398
Ensembl chr17:41,702,540...41,724,393 		JBrowse link
G ACTR8 actin related protein 8 located_in
part_of		 ISO
IEA		 (PMID:21303910) ComplexPortal
TreeGrafter
Ensembl		 PMID:21303910 GO_REF:0000107 GO_REF:0000118 NCBI chr13:35,951,601...35,988,501
Ensembl chr13:35,963,945...35,987,140 		JBrowse link
G CHDH choline dehydrogenase part_of IBA GO_Central GO_REF:0000033 NCBI chr13:35,910,688...35,950,438
Ensembl chr13:35,910,698...35,948,683 		JBrowse link
G INO80 INO80 complex ATPase subunit located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
InterPro
Ensembl
UniProt		 PMID:21303910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:130,201,705...130,341,627
Ensembl chr 1:130,201,718...130,342,838 		JBrowse link
G INO80B INO80 complex subunit B located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:21303910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:68,585,038...68,588,321
Ensembl chr 3:68,585,040...68,588,303 		JBrowse link
G INO80C INO80 complex subunit C located_in
part_of		 ISO
IBA
IEA		 (PMID:21303910) ComplexPortal
GO_Central
TreeGrafter
Ensembl
InterPro		 PMID:21303910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:119,262,488...119,285,852
Ensembl chr 6:119,262,227...119,285,779 		JBrowse link
G INO80D INO80 complex subunit D located_in
part_of		 ISO
IEA		 (PMID:21303910) ComplexPortal
Ensembl		 PMID:21303910 GO_REF:0000107 NCBI chr15:109,301,753...109,376,614
Ensembl chr15:109,307,166...109,376,463 		JBrowse link
G INO80E INO80 complex subunit E located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
Ensembl
InterPro		 PMID:21303910 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:18,202,092...18,212,187
Ensembl chr 3:18,202,134...18,212,186 		JBrowse link
G MCRS1 microspherule protein 1 located_in
part_of		 ISO
IEA		 (PMID:21303910) ComplexPortal
InterPro
Ensembl		 PMID:21303910 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:15,517,028...15,526,567
Ensembl chr 5:15,517,032...15,526,510 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein part_of
located_in		 IEA
ISO		 (PMID:18922472), (PMID:21303910) InterPro
UniProt
Ensembl		 PMID:18922472 PMID:21303910 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:56,616,865...56,656,068
Ensembl chr 9:56,614,227...56,656,056 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:21303910 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:72,196,219...72,246,514
Ensembl chr13:72,200,511...72,248,582 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 located_in
part_of		 ISO
IEA
IBA		 (PMID:21303910) ComplexPortal
TreeGrafter
GO_Central
Ensembl		 PMID:21303910 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893 		JBrowse link
G TFPT TCF3 fusion partner located_in
part_of		 ISO
IBA
IEA		 (PMID:21303910) ComplexPortal
GO_Central
TreeGrafter
Ensembl		 PMID:21303910 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:56,011,496...56,018,166
Ensembl chr 6:56,011,491...56,018,169 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 part_of
located_in		 IEA
ISS		 Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr10:725,688...761,633
Ensembl chr10:725,561...763,985 		JBrowse link
G YY1 YY1 transcription factor located_in
part_of		 ISO
IEA		 (PMID:21303910) ComplexPortal
Ensembl		 PMID:21303910 GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757 		JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,317,515...53,412,649
Ensembl chr 7:53,317,540...53,412,645 		JBrowse link
G BRCA1 BRCA1 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668 		JBrowse link
G BRCA2 BRCA2 DNA repair associated located_in IEA Ensembl GO_REF:0000107 NCBI chr11:8,805,950...8,858,128
Ensembl chr11:8,805,953...8,858,418 		JBrowse link
G DMC1 DNA meiotic recombinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,431,236...9,470,333
Ensembl chr 5:9,431,177...9,470,113 		JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821 		JBrowse link
G KASH5 KASH domain containing 5 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:54,476,989...54,501,099
Ensembl chr 6:54,477,058...54,500,887 		JBrowse link
G MEI4 meiotic double-stranded break formation protein 4 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:88,188,920...88,399,072
Ensembl chr 1:88,189,903...88,399,137 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 located_in ISO (PMID:21743440) MGI PMID:21743440 NCBI chr17:34,035,526...34,064,215 JBrowse link
G RAD51 RAD51 recombinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136 		JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537 		JBrowse link
G RPA1 replication protein A1 located_in ISO (PMID:21743440), (PMID:22711701) MGI PMID:21743440 PMID:22711701 NCBI chr12:48,009,652...48,048,744
Ensembl chr12:48,009,719...48,048,741 		JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000662 RGD PMID:10652260 RGD:1331378 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,218,543 		JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395 		JBrowse link
G SMC3 structural maintenance of chromosomes 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:120,969,629...121,008,924
Ensembl chr14:120,969,631...121,021,497 		JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889 		JBrowse link
G SYCP2 synaptonemal complex protein 2 is_active_in
located_in		 IBA
IEA		 GO_Central
Ensembl
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209 		JBrowse link
G SYCP2L synaptonemal complex protein 2 like is_active_in
located_in		 IBA
ISO		 (PMID:26362258) GO_Central
MGI		 PMID:26362258 GO_REF:0000033 NCBI chr 7:7,574,153...7,647,874
Ensembl chr 7:7,574,372...7,640,989 		JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO PMID:9933407
(MGI:1352918|PMID:10678170), (PMID:18802469), (PMID:19283064), (PMID:21539824), (PMID:21743440), (PMID:22011390), (PMID:22711701), (PMID:22854038), (PMID:23133398), (PMID:23555294), (PMID:25533956), (PMID:25675407)		 UniProt
MGI		 PMID:9933407 PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 More... MGI:1352918 RGD:11035335 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656 		JBrowse link
nuclear origin of replication recognition complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRWD1 leucine rich repeats and WD repeat domain containing 1 part_of IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:9,806,251...9,812,488
Ensembl chr 3:9,806,246...9,812,478 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr13:72,630,378...72,651,270
Ensembl chr13:72,630,380...72,657,786 		JBrowse link
G ORC1 origin recognition complex subunit 1 part_of
located_in		 IEA
ISO		 (PMID:16549788) Ensembl
TreeGrafter
ComplexPortal		 PMID:16549788 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:159,819,302...159,852,306
Ensembl chr 6:159,819,339...159,852,305 		JBrowse link
G ORC2 origin recognition complex subunit 2 part_of
located_in		 IEA
IBA
ISO		 (PMID:16549788) Ensembl
GO_Central
TreeGrafter
ComplexPortal
UniProt		 PMID:16549788 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr15:104,612,727...104,656,558
Ensembl chr15:104,613,610...104,656,492 		JBrowse link
G ORC3 origin recognition complex subunit 3 part_of
located_in		 IEA
ISO		 (PMID:16549788) Ensembl
TreeGrafter
ComplexPortal
InterPro		 PMID:16549788 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:55,982,132...56,044,244
Ensembl chr 1:55,954,159...56,042,853 		JBrowse link
G ORC4 origin recognition complex subunit 4 part_of
located_in		 IEA
IBA
ISO		 (PMID:16549788) Ensembl
TreeGrafter
GO_Central
ComplexPortal		 PMID:16549788 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:4,096,539...4,176,332
Ensembl chr15:4,096,647...4,171,398 		JBrowse link
G ORC5 origin recognition complex subunit 5 part_of
located_in		 IEA
IBA
ISO		 (PMID:16549788) Ensembl
TreeGrafter
GO_Central
ComplexPortal		 PMID:16549788 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:104,078,792...104,166,530
Ensembl chr 9:104,083,830...104,166,541 		JBrowse link
G ORC6 origin recognition complex subunit 6 part_of
located_in		 IEA
IBA
ISO		 (PMID:16549788) InterPro
TreeGrafter
GO_Central
ComplexPortal
Ensembl		 PMID:16549788 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:37,934,903...37,943,950
Ensembl chr 6:37,934,908...37,943,886 		JBrowse link
nuclear replication fork term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAZ1B bromodomain adjacent to zinc finger domain 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,761,461...10,843,918
Ensembl chr 3:10,761,499...10,843,840 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 located_in
is_active_in		 IEA
ISO		 (PMID:33412112) Ensembl
UniProt		 PMID:33412112 GO_REF:0000107 NCBI chr 2:69,602,121...69,644,862
Ensembl chr 2:69,602,136...69,644,854 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:74,721,313...74,736,784
Ensembl chr 3:74,724,291...74,736,764 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor is_active_in
located_in		 IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:48,481,292...48,523,921
Ensembl chr10:48,480,705...48,538,952 		JBrowse link
G MMS22L MMS22 like, DNA repair protein located_in
is_active_in		 IEA
ISO		 (PMID:27797818) Ensembl
TreeGrafter
UniProt		 PMID:27797818 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:64,306,078...64,459,956
Ensembl chr 1:64,306,073...64,459,904 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 located_in
is_active_in		 IEA
ISO		 (PMID:33412112) Ensembl
UniProt		 PMID:33412112 GO_REF:0000107 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PCNA proliferating cell nuclear antigen located_in ISO (PMID:15543136), (PMID:21383955) BHF-UCL PMID:15543136 PMID:21383955 NCBI chr17:14,137,746...14,142,584
Ensembl chr17:14,136,886...14,142,744 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:84,184,572...84,224,943
Ensembl chr 8:84,184,576...84,224,871 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:125,410,221...125,488,471
Ensembl chr 8:125,409,507...125,488,153 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 located_in
is_active_in		 IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:118,627,734...118,688,005
Ensembl chr15:118,627,467...118,688,397 		JBrowse link
G TONSL tonsoku like, DNA repair protein located_in
is_active_in		 IEA
ISO		 (PMID:26527279), (PMID:29478807) Ensembl
TreeGrafter
UniProt		 PMID:26527279 PMID:29478807 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:349,992...361,749
Ensembl chr 4:350,060...362,167 		JBrowse link
G TREX1 three prime repair exonuclease 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 located_in
is_active_in		 IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:184,300,291...184,378,974
Ensembl chr 1:184,300,293...184,378,959 		JBrowse link
G ZMIZ2 zinc finger MIZ-type containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,579,650...50,598,921
Ensembl chr18:50,579,655...50,598,562 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:16,414,291...16,727,659
Ensembl chr15:16,414,757...16,727,841 		JBrowse link
nucleolus organizer region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT7 sirtuin 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,078,155...1,084,112
Ensembl chr12:1,078,166...1,084,119 		JBrowse link
perichromatin fibrils term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLOCK clock circadian regulator ISO RGD PMID:16208722 RGD:10401943 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,793,342...54,877,777 		JBrowse link
G CPSF6 cleavage and polyadenylation specific factor 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,525,668...33,559,941
Ensembl chr 5:33,525,689...33,555,226 		JBrowse link
G DHX9 DExH-box helicase 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,141,967...124,185,349 		JBrowse link
G NUFIP1 nuclear FMR1 interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,267,447...22,302,714
Ensembl chr11:22,267,481...22,302,707 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 located_in ISO (PMID:10318760) MGI PMID:10318760 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,295 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 ISO MMO:0000663 RGD PMID:19321046 RGD:150429709 NCBI chr12:4,800,578...4,803,767
Ensembl chr12:4,800,624...4,801,675 		JBrowse link
G TARDBP TAR DNA binding protein ISO RGD PMID:19539030 RGD:5687141 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,860...71,227,704 		JBrowse link
G TRIM24 tripartite motif containing 24 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,055,211...11,151,755
Ensembl chr18:11,055,213...11,151,404 		JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233 		JBrowse link
replication fork protection complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TIMELESS timeless circadian regulator part_of IBA GO_Central GO_REF:0000033 Ensembl chr 5:21,763,014...21,787,521 JBrowse link
G TIPIN TIMELESS interacting protein part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 1:164,349,196...164,369,297
Ensembl chr 1:164,350,705...164,369,223 		JBrowse link
Rpd3L complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ING3 inhibitor of growth family member 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,946,529...25,976,528
Ensembl chr18:25,948,097...25,976,499 		JBrowse link
Rpd3L-Expanded complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC3 histone deacetylase 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 2:143,273,188...143,287,421
Ensembl chr 2:143,273,192...143,287,399 		JBrowse link
G KMT2E lysine methyltransferase 2E (inactive) part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:104,876,301...105,007,161
Ensembl chr 9:104,911,821...105,007,084 		JBrowse link
G SETD5 SET domain containing 5 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:65,759,973...65,851,747
Ensembl chr13:65,759,987...65,850,506 		JBrowse link
Rpd3S complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSL3 MSL complex subunit 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr  X:8,519,366...8,535,249
Ensembl chr  X:8,519,370...8,535,249 		JBrowse link
Set3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KMT2E lysine methyltransferase 2E (inactive) part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:104,876,301...105,007,161
Ensembl chr 9:104,911,821...105,007,084 		JBrowse link
G SETD5 SET domain containing 5 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:65,759,973...65,851,747
Ensembl chr13:65,759,987...65,850,506 		JBrowse link
Sin3-type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRMS1 BRMS1 transcriptional repressor and anoikis regulator part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:6,046,077...6,053,672
Ensembl chr 2:6,046,098...6,053,667 		JBrowse link
G BRMS1L BRMS1 like transcriptional repressor part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 7:64,083,286...64,123,852
Ensembl chr 7:64,083,289...64,123,857 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 part_of ISO (PMID:17827154) BHF-UCL PMID:17827154 NCBI chr17:34,692,960...34,748,067 JBrowse link
G HDAC1 histone deacetylase 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411 		JBrowse link
G HDAC2 histone deacetylase 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585 		JBrowse link
G ING2 inhibitor of growth family member 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:44,917,595...44,925,900
Ensembl chr15:44,918,066...44,925,867 		JBrowse link
G MORF4L1 mortality factor 4 like 1 part_of ISO (PMID:14966270) UniProt PMID:14966270 NCBI chr 7:48,050,050...48,075,799
Ensembl chr 7:48,050,045...48,075,795 		JBrowse link
G PHF12 PHD finger protein 12 part_of IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:45,129,864...45,174,755
Ensembl chr12:45,130,106...45,174,792 		JBrowse link
G SAP130 Sin3A associated protein 130 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:59,312,401...59,408,813
Ensembl chr15:59,312,418...59,410,302 		JBrowse link
G SIN3A SIN3 transcription regulator family member A part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:58,171,821...58,246,126
Ensembl chr 7:58,176,167...58,245,971 		JBrowse link
G SIN3B SIN3 transcription regulator family member B part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:60,750,227...60,791,660
Ensembl chr 2:60,750,231...60,791,612 		JBrowse link
G SINHCAF SIN3-HDAC complex associated factor part_of ISO (PMID:22984288) UniProt PMID:22984288 NCBI chr 5:42,930,445...42,963,604
Ensembl chr 5:42,930,521...42,985,144 		JBrowse link
G SUDS3 SDS3 homolog, SIN3A corepressor complex component part_of IEA TreeGrafter GO_REF:0000118 NCBI chr14:34,241,220...34,317,092
Ensembl chr14:34,156,339...34,317,081 		JBrowse link
Slx1-Slx4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit part_of IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 3:18,346,501...18,349,509 JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit part_of IEA
IBA		 InterPro
Ensembl
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:38,646,904...38,670,173
Ensembl chr 3:38,646,938...38,670,168 		JBrowse link
Swi5-Sfr1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFR1 SWI5 dependent homologous recombination repair protein 1 part_of IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr14:115,064,955...115,073,856
Ensembl chr14:115,065,057...115,073,855 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:268,720,232...268,726,527
Ensembl chr 1:268,720,355...268,726,521 		JBrowse link
Swi5-Swi2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SWI5 SWI5 homologous recombination repair protein part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:268,720,232...268,726,527
Ensembl chr 1:268,720,355...268,726,521 		JBrowse link
Swr1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR6 actin related protein 6 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 5:83,909,415...83,929,076
Ensembl chr 5:83,908,884...83,929,045 		JBrowse link
G ANP32E acidic nuclear phosphoprotein 32 family member E part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:98,849,114...98,869,095
Ensembl chr 4:98,849,196...98,869,098 		JBrowse link
G BRD8 bromodomain containing 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:140,182,195...140,202,247
Ensembl chr 2:140,168,636...140,202,247 		JBrowse link
G CFDP1 craniofacial development protein 1 part_of IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:12,223,701...12,354,180
Ensembl chr 6:12,223,748...12,354,177 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:167,083,053...167,091,654
Ensembl chr 6:167,082,849...167,091,630 		JBrowse link
G EP400 E1A binding protein p400 part_of IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:23,286,938...23,396,316
Ensembl chr14:23,289,244...23,396,656 		JBrowse link
G ING3 inhibitor of growth family member 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:25,946,529...25,976,528
Ensembl chr18:25,948,097...25,976,499 		JBrowse link
G KAT5 lysine acetyltransferase 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:6,560,544...6,572,461
Ensembl chr 2:6,560,513...6,572,466 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 part_of IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:72,196,219...72,246,514
Ensembl chr13:72,200,511...72,248,582 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 part_of IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893 		JBrowse link
G SRCAP Snf2 related CREBBP activator protein part_of IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:17,662,374...17,702,862
Ensembl chr 3:17,664,349...17,700,219 		JBrowse link
G TRRAP transformation/transcription domain associated protein part_of ISO (PMID:24463511) UniProt PMID:24463511 NCBI chr 3:5,903,205...6,029,343
Ensembl chr 3:5,909,022...6,029,333 		JBrowse link
G ZNHIT1 zinc finger HIT-type containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 3:8,918,873...8,926,595
Ensembl chr 3:8,918,872...8,926,589 		JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACYP1 acylphosphatase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,220,318...98,265,187
Ensembl chr 7:98,220,555...98,247,125 		JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 located_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:78,553,680...78,576,057
Ensembl chr 7:78,564,122...78,575,462 		JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,659,456...10,716,210
Ensembl chr 3:10,669,664...10,682,618 		JBrowse link
G HORMAD1 HORMA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,447,298...98,469,650
Ensembl chr 4:98,449,891...98,469,650 		JBrowse link
G HORMAD2 HORMA domain containing 2 located_in IEA Ensembl GO_REF:0000107 Ensembl chr14:47,072,091...47,161,889 JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 located_in ISO (PMID:8622925) MGI PMID:8622925 NCBI chr 7:88,607,140...88,609,947 JBrowse link
G INCENP inner centromere protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,411,942...9,445,825
Ensembl chr 2:9,411,942...9,445,821 		JBrowse link
G LIG3 DNA ligase 3 located_in ISO (PMID:9001252) MGI PMID:9001252 NCBI chr12:40,153,105...40,205,077
Ensembl chr12:40,153,397...40,183,622 		JBrowse link
G LOC100154655 synaptonemal complex protein 3-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:124,078,500...124,089,002 JBrowse link
G LOC100622897 synaptonemal complex protein 3-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:124,048,096...124,060,530 JBrowse link
G MLH1 mutL homolog 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,203...21,877,757 		JBrowse link
G MSH4 mutS homolog 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,410,820...137,524,459
Ensembl chr 6:137,410,691...137,534,233 		JBrowse link
G MSH5 mutS homolog 5 located_in ISO (PMID:16260499) MGI PMID:16260499 NCBI chr 7:23,852,864...23,872,760
Ensembl chr 7:23,852,918...23,872,755 		JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) ISO RGD PMID:1363622 RGD:633987 NCBI chr12:20,881,807...20,891,482
Ensembl chr12:20,882,344...20,891,484 		JBrowse link
G PLK1 polo like kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,537,814...22,550,901
Ensembl chr 3:22,537,831...22,552,380 		JBrowse link
G REC8 REC8 meiotic recombination protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,118,743...75,127,759
Ensembl chr 7:75,118,744...75,125,537 		JBrowse link
G RNF212 ring finger protein 212 located_in IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:393,707...413,952 JBrowse link
G RNF212B ring finger protein 212B located_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:75,798,895...75,831,455
Ensembl chr 7:75,796,882...75,829,620 		JBrowse link
G SMC1A structural maintenance of chromosomes 1A ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,218,543 		JBrowse link
G SMC1B structural maintenance of chromosomes 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,976,098...4,067,148
Ensembl chr 5:3,976,140...4,067,395 		JBrowse link
G SMC3 structural maintenance of chromosomes 3 ISO MMO:0000679 RGD PMID:10652260 RGD:1331378 NCBI chr14:120,969,629...121,008,924
Ensembl chr14:120,969,631...121,021,497 		JBrowse link
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889 		JBrowse link
G SYCE1 synaptonemal complex central element protein 1 located_in
is_active_in		 IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr14:141,726,708...141,737,830
Ensembl chr14:141,726,208...141,735,919 		JBrowse link
G SYCP1 synaptonemal complex protein 1 located_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:8660935 GO_REF:0000002 GO_REF:0000107 RGD:9686370 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398 		JBrowse link
G SYCP2 synaptonemal complex protein 2 located_in ISO
IEA		 RGD
Ensembl		 PMID:9592139 GO_REF:0000107 RGD:69387 NCBI chr17:59,875,992...59,962,314
Ensembl chr17:59,875,993...59,955,209 		JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in
is_active_in		 IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656 		JBrowse link
G SYN1 synapsin I located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,090,245...42,142,254
Ensembl chr  X:42,090,246...42,142,224 		JBrowse link
G TEX11 testis expressed 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,543,933...56,925,104
Ensembl chr  X:56,544,560...56,925,779 		JBrowse link
G TEX12 testis expressed 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,864,093...39,869,572
Ensembl chr 9:39,864,148...39,869,979 		JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAG3 STAG3 cohesin complex component located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,175,908...8,211,898
Ensembl chr 3:8,175,915...8,211,889 		JBrowse link
G SYCP1 synaptonemal complex protein 1 is_active_in
located_in		 ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:1464329 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:729937 NCBI chr 4:105,592,354...105,730,413
Ensembl chr 4:105,591,743...105,730,398 		JBrowse link
G SYCP3 synaptonemal complex protein 3 located_in ISO (PMID:15870106) MGI PMID:15870106 NCBI chr 5:82,492,744...82,501,068
Ensembl chr 5:82,493,034...82,501,656 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18685
    cellular anatomical entity 18463
      membrane-enclosed lumen 4312
        organelle lumen 4312
          intracellular organelle lumen 4311
            nuclear lumen 3884
              nuclear chromosome 221
                Barr body 7
                CMG complex 11
                COMA complex 0
                GINS complex 5
                Ino80 complex 16
                RITS complex 0
                Rpd3L-Expanded complex 3
                Set3 complex 2
                Sin3-type complex + 15
                Slx1-Slx4 complex 2
                Smp focus 0
                Swi5-Sfr1 complex 2
                Swi5-Swi2 complex 1
                Swr1 complex 13
                condensed nuclear chromosome + 80
                epsilon DNA polymerase complex 4
                nuclear origin of replication recognition complex 8
                nuclear replication fork + 35
                nucleolar chromatin + 1
                perichromatin fibrils 8
Path 2
Term Annotations click to browse term
  cellular_component 18685
    cellular anatomical entity 18463
      intracellular anatomical structure 13494
        intracellular organelle 12007
          intracellular membrane-bounded organelle 10852
            nucleus 6842
              nuclear lumen 3884
                nuclear chromosome 221
                  Barr body 7
                  CMG complex 11
                  COMA complex 0
                  GINS complex 5
                  Ino80 complex 16
                  RITS complex 0
                  Rpd3L-Expanded complex 3
                  Set3 complex 2
                  Sin3-type complex + 15
                  Slx1-Slx4 complex 2
                  Smp focus 0
                  Swi5-Sfr1 complex 2
                  Swi5-Swi2 complex 1
                  Swr1 complex 13
                  condensed nuclear chromosome + 80
                  epsilon DNA polymerase complex 4
                  nuclear origin of replication recognition complex 8
                  nuclear replication fork + 35
                  nucleolar chromatin + 1
                  perichromatin fibrils 8
paths to the root