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ONTOLOGY REPORT - ANNOTATIONS

Term:protein polyubiquitination
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Accession:GO:0000209 term browser browse the term
Definition:Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
Synonyms:exact_synonym: protein polyubiquitinylation;   protein polyubiquitylation
 related_synonym: polyubiquitin


show annotations for term's descendants           Sort by:
protein polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,903,815...43,073,918
Ensembl chr18:42,932,513...43,072,827 		JBrowse link
G AMFR autocrine motility factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,766,910...59,803,292
Ensembl chr 2:59,767,324...59,801,883 		JBrowse link
G ANKIB1 ankyrin repeat and IBR domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:17,835,582...18,007,077
Ensembl chr14:17,837,117...18,004,106 		JBrowse link
G AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:47,798,946...47,819,364
Ensembl chr 8:47,801,895...47,819,318 		JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:35,927,277...36,040,168
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:40,178,560...40,230,870
Ensembl chr20:40,179,168...40,230,880 		JBrowse link
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610558) Ensembl
MGI		 PMID:23610558 GO_REF:0000107 NCBI chr 7:44,834,006...44,939,538
Ensembl chr 7:44,840,099...44,940,619 		JBrowse link
G AXIN1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chr 6:40,155,797...40,218,330
Ensembl chr 6:40,158,244...40,218,343 		JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16717086) MGI
Ensembl		 PMID:16717086 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G BFAR bifunctional apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,593,931...28,624,867
Ensembl chr 6:28,594,709...28,624,759 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,294,080...29,314,837
Ensembl chr 5:29,294,692...29,312,771 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581 		JBrowse link
G C28H10orf90 chromosome 28 C10orf90 homolog involved_in ISO (MGI:6201913|PMID:24240685) UniProt PMID:24240685 MGI:6201913 NCBI chr28:35,514,489...35,721,091
Ensembl chr28:35,515,286...35,720,509 		JBrowse link
G CBFB core-binding factor subunit beta involved_in ISO (PMID:22190036) CACAO PMID:22190036 NCBI chr 5:82,253,496...82,313,765
Ensembl chr 5:82,255,617...82,313,168 		JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:17675467 RGD:11576315 NCBI chr 5:14,600,409...14,676,974
Ensembl chr 5:14,607,013...14,676,956 		JBrowse link
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:57,960,506...57,967,388
Ensembl chr20:57,960,833...57,967,371 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:18305112) UniProt PMID:18305112 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CHFR checkpoint with forkhead and ring finger domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15793587) Ensembl
MGI		 PMID:15793587 GO_REF:0000107 NCBI chr26:251,369...324,699
Ensembl chr26:294,909...324,696 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G CUL3 cullin 3 involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:27708159) Ensembl
MGI		 PMID:27708159 GO_REF:0000107 NCBI chr25:37,730,903...37,819,851
Ensembl chr25:37,733,229...37,800,886 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:92,489,981...92,538,199
Ensembl chr  X:92,491,114...92,537,672 		JBrowse link
G DCAF15 DDB1 and CUL4 associated factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,519,435...48,527,701
Ensembl chr20:48,519,464...48,527,363 		JBrowse link
G DDA1 DET1 and DDB1 associated 1 involved_in ISO (PMID:31686031) UniProt PMID:31686031 NCBI chr20:45,440,046...45,448,564
Ensembl chr20:45,439,682...45,448,525 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,354,201...42,378,463
Ensembl chr18:42,354,572...42,377,947 		JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:10,323,842...10,368,529
Ensembl chr 7:10,323,559...10,369,560 		JBrowse link
G DYSF dysferlin acts_upstream_of ISO (PMID:20724702) MGI PMID:20724702 NCBI chr17:51,011,197...51,228,969
Ensembl chr17:51,011,197...51,228,876 		JBrowse link
G DZIP3 DAZ interacting zinc finger protein 3 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr33:13,843,426...13,928,749
Ensembl chr33:13,843,767...13,927,189 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:47,502,777...47,559,012
Ensembl chr 2:47,503,762...47,558,889 		JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:3,602,105...4,086,182
Ensembl chr 3:3,618,236...4,083,554 		JBrowse link
G FBXL7 F-box and leucine rich repeat protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,348,187...87,637,517
Ensembl chr 4:87,350,321...87,612,238 		JBrowse link
G FBXO22 F-box protein 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19319192) TreeGrafter
MGI		 PMID:19319192 GO_REF:0000118 NCBI chr30:40,100,768...40,127,708
Ensembl chr30:40,101,540...40,189,159 		JBrowse link
G FBXO28 F-box protein 28 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:40,168,914...40,202,545
Ensembl chr 7:40,172,641...40,202,722 		JBrowse link
G FBXO4 F-box protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:67,620,947...67,664,862
Ensembl chr 4:67,651,275...67,664,915 		JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,238,695...40,363,445
Ensembl chr 4:40,238,737...40,361,125 		JBrowse link
G G2E3 G2/M-phase specific E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:18511420) MGI PMID:18511420 NCBI chr 8:9,914,276...9,968,798
Ensembl chr 8:9,914,008...9,965,623 		JBrowse link
G HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:62,231,642...62,337,242
Ensembl chr12:62,227,078...62,337,183 		JBrowse link
G HDAC6 histone deacetylase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11689694) Ensembl
MGI		 PMID:11689694 GO_REF:0000107 NCBI chr  X:42,004,268...42,024,726
Ensembl chr  X:42,004,591...42,024,427 		JBrowse link
G HECTD2 HECT domain E3 ubiquitin protein ligase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr28:5,997,430...6,068,184
Ensembl chr28:5,997,445...6,065,815 		JBrowse link
G HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:6,644,102...7,084,159
Ensembl chr18:6,647,658...7,084,567 		JBrowse link
G HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:5,850,518...6,213,353
Ensembl chr37:5,856,513...6,213,820 		JBrowse link
G HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr32:11,863,987...11,977,764
Ensembl chr32:11,866,405...11,976,442 		JBrowse link
G HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:19,223,525...19,352,490
Ensembl chr 4:19,210,166...19,351,709 		JBrowse link
G HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr32:11,756,487...11,800,695 JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:45,234,666...45,409,641
Ensembl chr  X:45,234,322...45,410,043 		JBrowse link
G IRF2BP1 interferon regulatory factor 2 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,737,988...109,740,915
Ensembl chr 1:109,738,756...109,740,510 		JBrowse link
G IRF9 interferon regulatory factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,152,146...4,157,201 JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469 		JBrowse link
G JADE2 jade family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25018020) Ensembl
MGI		 PMID:25018020 GO_REF:0000107 NCBI chr11:22,646,487...22,698,436
Ensembl chr11:22,648,221...22,698,448 		JBrowse link
G KLHL3 kelch like family member 3 involved_in ISO (PMID:23576762) MGI PMID:23576762 NCBI chr11:25,329,922...25,505,281
Ensembl chr11:25,334,241...25,443,494 		JBrowse link
G KLHL42 kelch like family member 42 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:19,945,465...19,962,742
Ensembl chr27:19,947,481...19,962,924 		JBrowse link
G LOC100688587 E3 ISG15--protein ligase HERC5-like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:63,352,690...63,354,337 JBrowse link
G LOC100856010 ubiquitin-conjugating enzyme E2 B-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:381,981...382,463 JBrowse link
G LOC102154486 ATP synthase subunit g, mitochondrial-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr12:176,357...177,030 JBrowse link
G LOC119876769 ubiquitin-conjugating enzyme E2 D1 involved_in IEA Ensembl GO_REF:0000107
G LOC479902 methylosome protein 50 involved_in ISO (MGI:7334688|PMID:35197566) UniProt PMID:35197566 MGI:7334688 NCBI chr 6:40,626,219...40,634,521
Ensembl chr 6:40,624,886...40,635,200 		JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,855,576...55,894,915
Ensembl chr 9:55,856,091...55,894,488 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:12049732 RGD:729224 NCBI chr 2:43,918,210...43,996,817
Ensembl chr 2:43,917,604...43,995,209 		JBrowse link
G MARCHF1 membrane associated ring-CH-type finger 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:59,753,597...60,279,692
Ensembl chr15:59,753,216...60,036,060 		JBrowse link
G MARCHF5 membrane associated ring-CH-type finger 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:6,724,070...6,775,436
Ensembl chr28:6,724,106...6,772,670 		JBrowse link
G MARCHF8 membrane associated ring-CH-type finger 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:2,006,923...2,165,491
Ensembl chr28:2,072,181...2,161,981 		JBrowse link
G MGRN1 mahogunin ring finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12560552) Ensembl
MGI		 PMID:12560552 GO_REF:0000107 NCBI chr 6:36,716,071...36,775,893
Ensembl chr 6:36,716,343...36,769,417 		JBrowse link
G MKRN1 makorin ring finger protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:8,508,036...8,530,009 JBrowse link
G MKRN2 makorin ring finger protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:5,972,567...6,002,424
Ensembl chr20:5,973,866...6,002,353 		JBrowse link
G MKRN3 makorin ring finger protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:36,411,945...36,419,307 JBrowse link
G MKRN3 makorin ring finger protein 3 involved_in IEA InterPro GO_REF:0000002 Ensembl chr 3:36,416,482...36,417,613 JBrowse link
G MND1 meiotic nuclear divisions 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:51,151,794...51,214,736
Ensembl chr15:51,125,238...51,214,597 		JBrowse link
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:21597459) UniProt PMID:21597459 NCBI chr 2:78,394,013...78,402,032
Ensembl chr 2:78,394,040...78,425,482 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870 		JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:17,629,163...17,858,471
Ensembl chr 1:17,633,591...17,950,072 		JBrowse link
G NFE2L1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:21554501) MGI PMID:21554501 NCBI chr 9:24,344,697...24,356,918
Ensembl chr 9:24,346,585...24,362,646 		JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:16,920,687...16,921,829
Ensembl chr35:16,920,687...16,921,829 		JBrowse link
G NHLRC3 NHL repeat containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:1,976,946...2,036,161
Ensembl chr25:1,977,667...2,035,949 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:79,979,593...79,990,875
Ensembl chr 5:79,978,865...79,989,860 		JBrowse link
G PABPC1L poly(A) binding protein cytoplasmic 1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:32,327,479...32,348,964
Ensembl chr24:32,327,494...32,349,071 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21874024) Ensembl
MGI
InterPro		 PMID:21874024 GO_REF:0000002 GO_REF:0000107 NCBI chr10:63,727,905...63,863,599
Ensembl chr10:63,729,604...63,743,303 		JBrowse link
G PELI2 pellino E3 ubiquitin protein ligase family member 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:31,834,287...32,013,387
Ensembl chr 8:31,833,909...32,012,092 		JBrowse link
G PELI3 pellino E3 ubiquitin protein ligase family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:50,870,483...50,881,089
Ensembl chr18:50,872,426...50,879,826 		JBrowse link
G PEX10 peroxisomal biogenesis factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,289,530...57,291,864
Ensembl chr 5:57,289,326...57,291,802 		JBrowse link
G PEX12 peroxisomal biogenesis factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,083,895...38,088,192
Ensembl chr 9:38,084,285...38,087,011 		JBrowse link
G PPIL2 peptidylprolyl isomerase like 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11435423) MGI
TreeGrafter
Ensembl		 PMID:11435423 GO_REF:0000107 GO_REF:0000118 NCBI chr26:30,939,556...30,966,210
Ensembl chr26:30,939,628...30,964,880 		JBrowse link
G PRAME PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:21822215) UniProt PMID:21822215 NCBI chr26:27,124,901...27,137,772
Ensembl chr26:27,124,902...27,136,112 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11435423) MGI
Ensembl		 PMID:11435423 GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,423,378...20,440,985
Ensembl chr24:20,423,988...20,441,114 		JBrowse link
G RBX1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:24,265,733...24,280,253
Ensembl chr10:24,266,408...24,280,235 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:59,881,889...59,943,271
Ensembl chr 9:59,881,966...59,929,341 		JBrowse link
G RNF111 ring finger protein 111 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chr30:23,934,156...24,027,529
Ensembl chr30:23,976,311...24,027,759 		JBrowse link
G RNF114 ring finger protein 114 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:36,466,704...36,483,895
Ensembl chr24:36,466,727...36,482,175 		JBrowse link
G RNF123 ring finger protein 123 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,553,016...39,582,127
Ensembl chr20:39,553,059...39,579,844 		JBrowse link
G RNF125 ring finger protein 125 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:57,570,779...57,607,485
Ensembl chr 7:57,574,738...57,608,017 		JBrowse link
G RNF135 ring finger protein 135 involved_in ISO (PMID:31006531)
(MGI:6152590|PMID:21147464)		 UniProt PMID:21147464 PMID:31006531 MGI:6152590 NCBI chr 9:40,794,772...40,809,022
Ensembl chr 9:40,795,297...40,808,737 		JBrowse link
G RNF14 ring finger protein 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:36,908,617...36,934,896
Ensembl chr 2:36,911,612...36,929,172 		JBrowse link
G RNF144A ring finger protein 144A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:4,522,095...4,637,741
Ensembl chr17:4,519,904...4,662,833 		JBrowse link
G RNF144B ring finger protein 144B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:17,056,189...17,226,254
Ensembl chr35:17,150,835...17,238,566 		JBrowse link
G RNF152 ring finger protein 152 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:14,914,508...15,001,843
Ensembl chr 1:14,985,769...14,986,380 		JBrowse link
G RNF166 ring finger protein 166 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:64,647,411...64,655,994
Ensembl chr 5:64,647,415...64,655,999 		JBrowse link
G RNF167 ring finger protein 167 involved_in ISO (PMID:16314844) UniProt PMID:16314844 NCBI chr 5:31,673,540...31,676,705
Ensembl chr 5:31,674,284...31,676,441 		JBrowse link
G RNF180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23926250) InterPro
MGI
Ensembl		 PMID:23926250 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:50,166,987...50,353,694
Ensembl chr 2:50,197,137...50,352,946 		JBrowse link
G RNF183 ring finger protein 183 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,660,593...67,669,633 JBrowse link
G RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:2,142,126...2,170,530
Ensembl chr13:2,142,876...2,169,944 		JBrowse link
G RNF19B ring finger protein 19B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:68,413,020...68,435,216
Ensembl chr 2:68,413,108...68,434,526 		JBrowse link
G RNF20 ring finger protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,239,245...58,266,637
Ensembl chr11:58,239,313...58,265,866 		JBrowse link
G RNF217 ring finger protein 217 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:63,902,985...64,094,491
Ensembl chr 1:63,962,515...64,085,011 		JBrowse link
G RNF31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,141,501...4,151,999 JBrowse link
G RNF41 ring finger protein 41 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18495327) Ensembl
MGI		 PMID:18495327 GO_REF:0000107 NCBI chr10:512,650...521,293
Ensembl chr10:514,635...542,395 		JBrowse link
G RUSC1 RUN and SH3 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,232,791...42,240,862
Ensembl chr 7:42,233,156...42,241,345 		JBrowse link
G SASH1 SAM and SH3 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr 1:39,221,243...39,478,057
Ensembl chr 1:39,146,020...39,476,914 		JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:37,076,318...37,170,664
Ensembl chr 1:37,077,949...37,163,041 		JBrowse link
G SKP1 S-phase kinase associated protein 1 involved_in ISO (PMID:12820959) ParkinsonsUK-UCL PMID:12820959 NCBI chr11:22,352,735...22,366,599
Ensembl chr11:22,352,439...22,364,024 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17785450) Ensembl
MGI		 PMID:17785450 GO_REF:0000107 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307 		JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:10,385,781...10,498,071
Ensembl chr 6:10,385,779...10,494,922 		JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:12,348,777...12,472,636
Ensembl chr 9:12,351,627...12,471,467 		JBrowse link
G SPOP speckle type BTB/POZ protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,685,723...25,752,953
Ensembl chr 9:25,686,439...25,752,900 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11435423) Ensembl
MGI
TreeGrafter		 PMID:11435423 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chr  X:55,693,091...55,764,268
Ensembl chr  X:55,693,194...55,763,683 		JBrowse link
G TMEM129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:62,381,240...62,386,381
Ensembl chr 3:62,381,411...62,385,349 		JBrowse link
G TNKS tankyrase involved_in ISO (PMID:19759537), (PMID:21478859) UniProt PMID:19759537 PMID:21478859 NCBI chr16:34,826,248...35,040,004
Ensembl chr16:34,831,662...35,039,946 		JBrowse link
G TNKS2 tankyrase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:6,286,125...6,354,284
Ensembl chr28:6,285,690...6,352,317 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:49,809,156...49,821,224
Ensembl chr11:49,809,465...49,821,075 		JBrowse link
G TOPORSL topoisomerase I binding, arginine and serine rich like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:60,277,510...60,281,646 JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,029,861...68,070,901
Ensembl chr12:68,030,197...68,058,518 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641 		JBrowse link
G TRIM2 tripartite motif containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:50,973,758...51,104,422 JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185 		JBrowse link
G TRIM3 tripartite motif containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:29,766,086...29,782,573
Ensembl chr21:29,766,094...29,782,538 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22299041) Ensembl
MGI		 PMID:22299041 GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,635,177...28,656,759
Ensembl chr21:28,635,396...28,654,490 		JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
G TRIM58 tripartite motif containing 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,582,244...1,599,482
Ensembl chr14:1,576,272...1,598,487 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124 		JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:3,888,287...3,959,910
Ensembl chr23:3,893,647...3,960,411 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:42,060,103...42,208,326
Ensembl chr25:42,060,991...42,208,054 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:91,608,936...91,617,993
Ensembl chr  X:91,529,855...91,617,086 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18511420) Ensembl
MGI		 PMID:18511420 GO_REF:0000107 NCBI chr 4:10,521,818...10,551,818
Ensembl chr 4:10,521,833...10,551,214 		JBrowse link
G UBE2D2 ubiquitin conjugating enzyme E2 D2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:34,827,994...34,884,047
Ensembl chr 2:34,827,888...34,897,412 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr32:24,190,897...24,221,627 JBrowse link
G UBE2E1 ubiquitin conjugating enzyme E2 E1 involved_in ISO (PMID:15247280), (PMID:16522193) BHF-UCL PMID:15247280 PMID:16522193 NCBI chr23:19,863,136...19,937,272
Ensembl chr23:19,863,253...19,937,247 		JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:30,332,277...30,430,225
Ensembl chr 5:30,334,968...30,427,529 		JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:6,912,742...7,022,029
Ensembl chr14:6,912,801...7,019,692 		JBrowse link
G UBE2K ubiquitin conjugating enzyme E2 K involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:72,713,035...72,780,199
Ensembl chr 3:72,717,236...72,780,210 		JBrowse link
G UBE2L3 ubiquitin conjugating enzyme E2 L3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:30,835,222...30,899,842
Ensembl chr26:30,823,209...30,898,324 		JBrowse link
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:40,130,456...40,189,244
Ensembl chr30:40,101,540...40,189,159 		JBrowse link
G UBE2R2 ubiquitin conjugating enzyme E2 R2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:50,554,173...50,678,284
Ensembl chr11:50,554,349...50,675,514 		JBrowse link
G UBE2U ubiquitin conjugating enzyme E2 U involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:45,947,637...45,998,353
Ensembl chr 5:45,947,639...45,997,722 		JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256 		JBrowse link
G UBE3B ubiquitin protein ligase E3B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr26:17,544,082...17,597,318
Ensembl chr26:17,540,918...17,597,722 		JBrowse link
G UBE3C ubiquitin protein ligase E3C involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:19,590,115...19,716,664
Ensembl chr16:19,589,172...19,777,260 		JBrowse link
G UBE3D ubiquitin protein ligase E3D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:43,264,956...43,475,583
Ensembl chr12:43,282,372...43,476,086 		JBrowse link
G UBE4A ubiquitination factor E4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11435423) UniProt
MGI
TreeGrafter		 PMID:11435423 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:15,338,279...15,375,722
Ensembl chr 5:15,341,141...15,370,294 		JBrowse link
G UBE4B ubiquitination factor E4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314518)
(PMID:11435423), (PMID:23509263)		 UniProt
MGI
TreeGrafter		 PMID:11435423 PMID:16314518 PMID:23509263 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:63,214,846...63,339,218
Ensembl chr 5:63,215,470...63,338,215 		JBrowse link
G UBOX5 U-box domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11435423) TreeGrafter
MGI		 PMID:11435423 GO_REF:0000118 NCBI chr24:18,124,237...18,166,506
Ensembl chr24:18,157,429...18,165,966 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:3,887,408...4,023,364
Ensembl chr13:3,879,220...4,023,955 		JBrowse link
G VSIG10 V-set and immunoglobulin domain containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:14,460,869...14,497,414
Ensembl chr26:14,441,304...14,497,174 		JBrowse link
G WSB1 WD repeat and SOCS box containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:41,870,182...41,887,078
Ensembl chr 9:41,870,185...41,886,647 		JBrowse link
G WSB2 WD repeat and SOCS box containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:14,440,035...14,456,158
Ensembl chr26:14,441,304...14,497,174 		JBrowse link
G WWP1 WW domain containing E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:32,523,719...32,620,507
Ensembl chr29:32,533,619...32,625,787 		JBrowse link
G YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:32,304,808...32,325,789
Ensembl chr24:32,304,812...32,323,938 		JBrowse link
G ZSWIM2 zinc finger SWIM-type containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:28,989,780...29,023,128
Ensembl chr36:28,989,212...29,022,057 		JBrowse link
negative regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:30328013) UniProt PMID:30328013 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G TRIM44 tripartite motif containing 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:32,242,830...32,351,540
Ensembl chr18:32,247,146...32,351,648 		JBrowse link
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP63 centrosomal protein 63 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:31,249,517...31,303,145
Ensembl chr23:31,249,673...31,303,142 		JBrowse link
G GPS2 G protein pathway suppressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,273,169...32,275,915
Ensembl chr 5:32,273,173...32,275,580 		JBrowse link
G MIR138A microRNA mir-138a involved_in ISO (PMID:23319823) ARUK-UCL PMID:23319823 NCBI chr23:2,223,136...2,223,197
Ensembl chr23:2,223,128...2,223,205 		JBrowse link
G MIR138B microRNA mir-138b involved_in ISO (PMID:23319823) ARUK-UCL PMID:23319823 NCBI chr 2:59,454,083...59,454,151
Ensembl chr 2:59,454,083...59,454,151 		JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,121,423...45,159,093
Ensembl chr11:45,121,588...45,159,098 		JBrowse link
negative regulation of protein polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYSF dysferlin acts_upstream_of_or_within ISO (PMID:20724702) MGI PMID:20724702 NCBI chr17:51,011,197...51,228,969
Ensembl chr17:51,011,197...51,228,876 		JBrowse link
G TTC36 tetratricopeptide repeat domain 36 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31537781) Ensembl
MGI		 PMID:31537781 GO_REF:0000107 NCBI chr 5:15,207,400...15,211,905
Ensembl chr 5:15,207,403...15,211,853 		JBrowse link
positive regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC2 baculoviral IAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,294,080...29,314,837
Ensembl chr 5:29,294,692...29,312,771 		JBrowse link
G GABARAP GABA type A receptor-associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,207,879...32,209,976
Ensembl chr 5:32,207,887...32,209,908 		JBrowse link
G NMI N-myc and STAT interactor acts_upstream_of_or_within ISO (PMID:23956435) MGI PMID:23956435 NCBI chr19:52,541,796...52,555,043
Ensembl chr19:52,541,981...52,553,574 		JBrowse link
positive regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC2 baculoviral IAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,294,080...29,314,837
Ensembl chr 5:29,294,692...29,312,771 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774 		JBrowse link
G LOC119868036 ubiquitin-conjugating enzyme E2 variant 2 involved_in IEA Ensembl GO_REF:0000107
G LOC119881719 ubiquitin-conjugating enzyme E2 variant 1 involved_in IEA Ensembl GO_REF:0000107
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232 		JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:51,623,628...51,683,039
Ensembl chr17:51,623,623...51,682,858 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,283,209...35,311,608
Ensembl chr29:35,282,072...35,311,333 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:10089880), (PMID:11057907) ComplexPortal PMID:10089880 PMID:11057907 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,570,172...36,601,200
Ensembl chr24:36,570,172...36,603,212 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
positive regulation of protein linear polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G XIAP X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,300,234...95,356,103
Ensembl chr  X:95,331,827...95,351,582 		JBrowse link
positive regulation of protein polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC2 baculoviral IAP repeat containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18621737) Ensembl
MGI		 PMID:18621737 GO_REF:0000107 NCBI chr 5:29,294,080...29,314,837
Ensembl chr 5:29,294,692...29,312,771 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 acts_upstream_of_or_within ISO (PMID:18621737) MGI PMID:18621737 NCBI chr 5:29,324,893...29,343,322
Ensembl chr 5:29,325,331...29,337,240 		JBrowse link
G FBXO4 F-box protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21911473) Ensembl
MGI		 PMID:21911473 GO_REF:0000107 NCBI chr 4:67,620,947...67,664,862
Ensembl chr 4:67,651,275...67,664,915 		JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in ISO (PMID:22682227) BHF-UCL PMID:22682227 NCBI chr 1:117,305,531...117,306,587
Ensembl chr 1:117,305,411...117,306,619 		JBrowse link
G LOC119876769 ubiquitin-conjugating enzyme E2 D1 involved_in IEA Ensembl GO_REF:0000107
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:5,481,449...5,533,139
Ensembl chr36:5,481,456...5,531,957 		JBrowse link
G RNF40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chr 6:17,402,022...17,414,494
Ensembl chr 6:17,402,908...17,414,362 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23277542) Ensembl
MGI		 PMID:23277542 GO_REF:0000107 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307 		JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:36,998,124...37,082,576
Ensembl chr23:36,997,705...37,077,401 		JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18621737) Ensembl
MGI		 PMID:18621737 GO_REF:0000107 NCBI chr 4:10,521,818...10,551,818
Ensembl chr 4:10,521,833...10,551,214 		JBrowse link
protein K11-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC1 anaphase promoting complex subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:36,210,026...36,313,785
Ensembl chr17:36,198,631...36,312,442 		JBrowse link
G ANAPC1 involved_in IEA TreeGrafter GO_REF:0000118
G ANAPC10 anaphase promoting complex subunit 10 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:43,528,978...43,781,843
Ensembl chr15:43,579,151...43,781,698 		JBrowse link
G ANAPC11 anaphase promoting complex subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:393,900...398,925
Ensembl chr 9:393,891...399,910 		JBrowse link
G ANAPC13 anaphase promoting complex subunit 13 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr23:31,241,715...31,249,677
Ensembl chr23:31,241,716...31,249,210 		JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:48,475,777...48,486,715
Ensembl chr 9:48,471,584...48,609,303 		JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:48,488,897...48,490,044
Ensembl chr 9:48,471,584...48,609,303 		JBrowse link
G ANAPC4 anaphase promoting complex subunit 4 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:84,878,686...84,914,876
Ensembl chr 3:84,878,693...84,914,882 		JBrowse link
G ANAPC5 anaphase promoting complex subunit 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:7,796,736...7,840,726
Ensembl chr26:7,796,736...7,840,719 		JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,223,627...8,247,976
Ensembl chr26:8,223,616...8,247,976 		JBrowse link
G AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:47,798,946...47,819,364
Ensembl chr 8:47,801,895...47,819,318 		JBrowse link
G CDC16 cell division cycle 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:61,283,263...61,312,283
Ensembl chr22:61,283,309...61,312,283 		JBrowse link
G CDC23 cell division cycle 23 involved_in ISO (PMID:18485873) UniProt PMID:18485873 NCBI chr11:25,834,752...25,851,588
Ensembl chr11:25,834,737...25,852,341 		JBrowse link
G CDC26 cell division cycle 26 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:67,632,887...67,641,291
Ensembl chr11:67,632,872...67,641,192 		JBrowse link
G CDC27 cell division cycle 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:9,281,152...9,351,629
Ensembl chr 9:9,281,196...9,348,678 		JBrowse link
G LOC102155658 ubiquitin-conjugating enzyme E2 L3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:1,551,189...1,551,584
Ensembl chr23:1,551,204...1,551,569 		JBrowse link
G LOC119867740 tripartite motif-containing protein 26 involved_in ISO (PMID:34017102) UniProt PMID:34017102
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G RNF115 ring finger protein 115 involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chr17:58,566,761...58,634,967
Ensembl chr17:58,571,694...58,660,663 		JBrowse link
G RNF26 ring finger protein 26 involved_in ISO (PMID:25254379) UniProt PMID:25254379 NCBI chr 5:14,564,949...14,567,756 JBrowse link
G RNF4 ring finger protein 4 involved_in ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G TPRN taperin involved_in IEA TreeGrafter GO_REF:0000118
G UBE2A ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:20061386) UniProt PMID:20061386 NCBI chr  X:91,608,936...91,617,993
Ensembl chr  X:91,529,855...91,617,086 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:18485873), (PMID:19822757), (PMID:20061386) UniProt PMID:18485873 PMID:19822757 PMID:20061386 NCBI chr24:33,128,300...33,133,637
Ensembl chr24:33,128,335...33,132,023 		JBrowse link
G UBE2D2 ubiquitin conjugating enzyme E2 D2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:34,827,994...34,884,047
Ensembl chr 2:34,827,888...34,897,412 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr32:24,190,897...24,221,627 JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:20,110,128...20,593,767
Ensembl chr23:20,130,230...20,486,399 		JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr36:24,201,066...24,285,695
Ensembl chr36:24,187,672...24,445,417 		JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,912,742...7,022,029
Ensembl chr14:6,912,801...7,019,692 		JBrowse link
G UBE2L3 ubiquitin conjugating enzyme E2 L3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:30,835,222...30,899,842
Ensembl chr26:30,823,209...30,898,324 		JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21376237) MGI
Ensembl		 PMID:21376237 GO_REF:0000107 NCBI chr 1:102,283,171...102,287,460
Ensembl chr 1:102,283,171...102,287,459 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G UBE2W ubiquitin conjugating enzyme E2 W involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:22,307,192...22,409,667 JBrowse link
protein K27-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,766,910...59,803,292
Ensembl chr 2:59,767,324...59,801,883 		JBrowse link
G RNF126 ring finger protein 126 involved_in ISO (PMID:36563124) UniProt PMID:36563124 NCBI chr20:57,890,333...57,899,364
Ensembl chr20:57,891,413...57,898,863 		JBrowse link
G RNF185 ring finger protein 185 involved_in ISO (PMID:28273161) UniProt PMID:28273161 NCBI chr26:24,146,172...24,177,747
Ensembl chr26:24,146,005...24,240,653 		JBrowse link
G RNF6 ring finger protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:13,199,201...13,240,347
Ensembl chr25:13,199,397...13,207,497 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754 		JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,283,171...102,287,460
Ensembl chr 1:102,283,171...102,287,459 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G WSB1 WD repeat and SOCS box containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,870,182...41,887,078
Ensembl chr 9:41,870,185...41,886,647 		JBrowse link
protein K29-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITCH itchy E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469 		JBrowse link
G LOC102153893 RING finger protein 224-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:48,454,100...48,456,251 JBrowse link
G RNF126 ring finger protein 126 involved_in ISO (PMID:36563124) UniProt PMID:36563124 NCBI chr20:57,890,333...57,899,364
Ensembl chr20:57,891,413...57,898,863 		JBrowse link
G RNF167 ring finger protein 167 involved_in ISO (PMID:33594058) UniProt PMID:33594058 NCBI chr 5:31,673,540...31,676,705
Ensembl chr 5:31,674,284...31,676,441 		JBrowse link
G RNF186 ring finger protein 186 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:78,915,131...78,916,909
Ensembl chr 2:78,915,339...78,916,037 		JBrowse link
G TRAF7 TNF receptor associated factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,788,451...38,805,666
Ensembl chr 6:38,788,454...38,962,167 		JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,283,171...102,287,460
Ensembl chr 1:102,283,171...102,287,459 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G UBE3C ubiquitin protein ligase E3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,590,115...19,716,664
Ensembl chr16:19,589,172...19,777,260 		JBrowse link
protein K33-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:47,798,946...47,819,364
Ensembl chr 8:47,801,895...47,819,318 		JBrowse link
G KLHL20 kelch like family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,430,490...25,484,245
Ensembl chr 7:25,430,745...25,484,311 		JBrowse link
protein K48-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:59,766,910...59,803,292
Ensembl chr 2:59,767,324...59,801,883 		JBrowse link
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,178,560...40,230,870
Ensembl chr20:40,179,168...40,230,880 		JBrowse link
G BFAR bifunctional apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,593,931...28,624,867
Ensembl chr 6:28,594,709...28,624,759 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581 		JBrowse link
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in ISO (PMID:20061386) UniProt PMID:20061386 NCBI chr20:57,960,506...57,967,388
Ensembl chr20:57,960,833...57,967,371 		JBrowse link
G CMTR1 cap methyltransferase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:6,454,605...6,505,127
Ensembl chr12:6,454,652...6,504,776 		JBrowse link
G CUL1 cullin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chr16:1,995,637...2,086,853
Ensembl chr16:1,995,960...2,052,864 		JBrowse link
G CUL3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:37,730,903...37,819,851
Ensembl chr25:37,733,229...37,800,886 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,676,686...25,684,270
Ensembl chr33:25,677,076...25,684,175 		JBrowse link
G DTX4 deltex E3 ubiquitin ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,535,957...37,570,937
Ensembl chr18:37,538,342...37,591,589 		JBrowse link
G FBXO38 F-box protein 38 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:60,360,543...60,416,727
Ensembl chr 4:60,320,648...60,417,205 		JBrowse link
G FBXO45 F-box protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G FBXO7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:30,928,059...30,948,858
Ensembl chr10:30,928,329...30,948,977 		JBrowse link
G FBXO9 F-box protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,514,590...20,562,507
Ensembl chr12:20,514,590...20,562,498 		JBrowse link
G HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:62,231,642...62,337,242
Ensembl chr12:62,227,078...62,337,183 		JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469 		JBrowse link
G KBTBD6 kelch repeat and BTB domain containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,466,707...9,478,514
Ensembl chr22:9,467,020...9,469,152 		JBrowse link
G KBTBD7 kelch repeat and BTB domain containing 7 involved_in ISO (PMID:25684205) UniProt PMID:25684205 NCBI chr22:9,388,467...9,391,099
Ensembl chr22:9,388,832...9,390,871 		JBrowse link
G KLHL3 kelch like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,329,922...25,505,281
Ensembl chr11:25,334,241...25,443,494 		JBrowse link
G LOC119876769 ubiquitin-conjugating enzyme E2 D1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G LOC475563 ubiquitin-conjugating enzyme E2 E1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:21,903,500...21,905,225 JBrowse link
G MARCHF6 membrane associated ring-CH-type finger 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:3,880,988...3,947,127
Ensembl chr34:3,884,487...3,943,035 		JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370 		JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,629,163...17,858,471
Ensembl chr 1:17,633,591...17,950,072 		JBrowse link
G NMI N-myc and STAT interactor acts_upstream_of ISO (PMID:23956435) MGI PMID:23956435 NCBI chr19:52,541,796...52,555,043
Ensembl chr19:52,541,981...52,553,574 		JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,525,581...15,621,287
Ensembl chr28:15,526,790...15,621,235 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21874024) Ensembl
MGI
TreeGrafter		 PMID:21874024 GO_REF:0000107 GO_REF:0000118 NCBI chr10:63,727,905...63,863,599
Ensembl chr10:63,729,604...63,743,303 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G RBX1 ring-box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chr10:24,265,733...24,280,253
Ensembl chr10:24,266,408...24,280,235 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RNF115 ring finger protein 115 involved_in ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chr17:58,566,761...58,634,967
Ensembl chr17:58,571,694...58,660,663 		JBrowse link
G RNF126 ring finger protein 126 involved_in ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chr20:57,890,333...57,899,364
Ensembl chr20:57,891,413...57,898,863 		JBrowse link
G RNF146 ring finger protein 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:65,988,600...66,010,873
Ensembl chr 1:65,988,656...66,010,881 		JBrowse link
G RNF152 ring finger protein 152 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:14,914,508...15,001,843
Ensembl chr 1:14,985,769...14,986,380 		JBrowse link
G RNF170 ring finger protein 170 involved_in ISO (PMID:31076723) UniProt PMID:31076723 NCBI chr16:22,901,224...22,929,990
Ensembl chr16:22,900,313...22,927,125 		JBrowse link
G RNF187 ring finger protein 187 involved_in ISO (PMID:20852630) UniProt PMID:20852630
G RNF216 ring finger protein 216 involved_in ISO (PMID:19893624) UniProt PMID:19893624 NCBI chr 6:12,185,870...12,347,461
Ensembl chr 6:12,185,846...12,361,869 		JBrowse link
G RNF34 ring finger protein 34 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:7,746,460...7,767,967
Ensembl chr26:7,744,924...7,767,892 		JBrowse link
G RNF4 ring finger protein 4 involved_in ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G RNF5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,571,277...1,575,151
Ensembl chr12:1,571,420...1,573,506 		JBrowse link
G RNF6 ring finger protein 6 involved_in ISO (MGI:3603857|PMID:16204183) UniProt PMID:16204183 MGI:3603857 NCBI chr25:13,199,201...13,240,347
Ensembl chr25:13,199,397...13,207,497 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G SKP1 S-phase kinase associated protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15145941), (PMID:23263282), (PMID:29997255)
(PMID:29593216)		 UniProt
MGI		 PMID:15145941 PMID:23263282 PMID:29593216 PMID:29997255 NCBI chr11:22,352,735...22,366,599
Ensembl chr11:22,352,439...22,364,024 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307 		JBrowse link
G SYVN1 synoviolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,061,284...52,068,672
Ensembl chr18:52,060,347...52,067,582 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,247,432...30,262,992
Ensembl chr 1:30,251,059...30,261,001 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,809,156...49,821,224
Ensembl chr11:49,809,465...49,821,075 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) MGI PMID:22539786 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
G TRIM45 tripartite motif containing 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:54,498,878...54,507,928
Ensembl chr17:54,498,883...54,506,839 		JBrowse link
G TRIM55 tripartite motif containing 55 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:15,786,423...15,831,059
Ensembl chr29:15,786,433...15,830,402 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124 		JBrowse link
G TRIM65 tripartite motif containing 65 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,713,535...4,720,268
Ensembl chr 9:4,714,086...4,718,592 		JBrowse link
G TTC3 tetratricopeptide repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:32,239,895...32,348,182
Ensembl chr31:32,213,438...32,347,195 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:20061386) UniProt PMID:20061386 NCBI chr  X:91,608,936...91,617,993
Ensembl chr  X:91,529,855...91,617,086 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:20061386) UniProt PMID:20061386 NCBI chr24:33,128,300...33,133,637
Ensembl chr24:33,128,335...33,132,023 		JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:10,521,818...10,551,818
Ensembl chr 4:10,521,833...10,551,214 		JBrowse link
G UBE2D2 ubiquitin conjugating enzyme E2 D2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:34,827,994...34,884,047
Ensembl chr 2:34,827,888...34,897,412 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr32:24,190,897...24,221,627 JBrowse link
G UBE2E1 ubiquitin conjugating enzyme E2 E1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:19,863,136...19,937,272
Ensembl chr23:19,863,253...19,937,247 		JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr23:20,110,128...20,593,767
Ensembl chr23:20,130,230...20,486,399 		JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr36:24,201,066...24,285,695
Ensembl chr36:24,187,672...24,445,417 		JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:30,332,277...30,430,225
Ensembl chr 5:30,334,968...30,427,529 		JBrowse link
G UBE2G2 ubiquitin conjugating enzyme E2 G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,432,855...38,470,202
Ensembl chr31:38,433,332...38,470,136 		JBrowse link
G UBE2H ubiquitin conjugating enzyme E2 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,912,742...7,022,029
Ensembl chr14:6,912,801...7,019,692 		JBrowse link
G UBE2K ubiquitin conjugating enzyme E2 K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,713,035...72,780,199
Ensembl chr 3:72,717,236...72,780,210 		JBrowse link
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 involved_in ISO (PMID:20061386) UniProt PMID:20061386 NCBI chr30:40,130,456...40,189,244
Ensembl chr30:40,101,540...40,189,159 		JBrowse link
G UBE2R2 ubiquitin conjugating enzyme E2 R2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:50,554,173...50,678,284
Ensembl chr11:50,554,349...50,675,514 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256 		JBrowse link
G UBE3C ubiquitin protein ligase E3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,590,115...19,716,664
Ensembl chr16:19,589,172...19,777,260 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:3,887,408...4,023,364
Ensembl chr13:3,879,220...4,023,955 		JBrowse link
G ZNRF1 zinc and ring finger 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:75,594,465...75,698,164
Ensembl chr 5:75,595,200...75,698,170 		JBrowse link
G ZNRF2 zinc and ring finger 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:43,029,270...43,123,292 JBrowse link
protein K6-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARD1 BRCA1 associated RING domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:21,946,770...22,024,672
Ensembl chr37:21,948,456...22,024,867 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G LOC102156002 BRCA1-associated RING domain protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:2,420,559...2,423,280 JBrowse link
G MTPN myotrophin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:12,316,487...12,369,148
Ensembl chr16:12,316,336...12,369,387 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G RNF14 ring finger protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,908,617...36,934,896
Ensembl chr 2:36,911,612...36,929,172 		JBrowse link
G RNF144A ring finger protein 144A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,522,095...4,637,741
Ensembl chr17:4,519,904...4,662,833 		JBrowse link
G RNF25 ring finger protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,266,945...25,273,269
Ensembl chr37:25,266,947...25,273,131 		JBrowse link
G RNF4 ring finger protein 4 involved_in ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G RNF6 ring finger protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:13,199,201...13,240,347
Ensembl chr25:13,199,397...13,207,497 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (PMID:23115235) UniProt PMID:23115235 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 involved_in ISO (PMID:36528027) UniProt PMID:36528027 NCBI chr32:24,190,897...24,221,627 JBrowse link
G UBE2J2 ubiquitin conjugating enzyme E2 J2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,440,394...56,455,491
Ensembl chr 5:56,441,821...56,455,460 		JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,283,171...102,287,460
Ensembl chr 1:102,283,171...102,287,459 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G WDR24 WD repeat domain 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,887,968...39,891,633
Ensembl chr 6:39,887,667...39,891,588 		JBrowse link
protein K63-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,178,560...40,230,870
Ensembl chr20:40,179,168...40,230,880 		JBrowse link
G ARRDC4 arrestin domain containing 4 involved_in ISO (PMID:28594402) UniProt PMID:28594402 NCBI chr 3:42,650,257...42,663,526
Ensembl chr 3:42,652,728...42,664,401 		JBrowse link
G BFAR bifunctional apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,593,931...28,624,867
Ensembl chr 6:28,594,709...28,624,759 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:18305112) UniProt PMID:18305112 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CNTF ciliary neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,758,148...37,765,698 JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22431752) TreeGrafter
MGI		 PMID:22431752 GO_REF:0000118 NCBI chr 8:10,399,183...10,493,074
Ensembl chr 8:10,400,604...10,491,247 		JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:23,476,619...23,630,574
Ensembl chr24:23,476,736...23,627,469 		JBrowse link
G LOC102153893 RING finger protein 224-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:48,454,100...48,456,251 JBrowse link
G LOC111094434 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr37:7,056,154...7,057,445 JBrowse link
G LOC119868036 ubiquitin-conjugating enzyme E2 variant 2 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119877539 ubiquitin-conjugating enzyme E2 N involved_in IEA TreeGrafter GO_REF:0000118
G LOC119881719 ubiquitin-conjugating enzyme E2 variant 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
G LOC607817 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:7,957,753...7,958,395 JBrowse link
G LOC607889 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:18,768,121...18,771,963 JBrowse link
G LOC609136 ubiquitin-conjugating enzyme E2N pseudogene involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:33,359,479...33,360,139 JBrowse link
G LOC609637 ubiquitin-conjugating enzyme E2 N-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:41,828,273...41,828,755 JBrowse link
G MAGEL2 MAGE family member L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:36,362,021...36,366,326
Ensembl chr 3:36,363,930...36,365,870 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO PMID:20159449 UniProt PMID:20159449 RGD:8554407 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,727,905...63,863,599
Ensembl chr10:63,729,604...63,743,303 		JBrowse link
G PELI3 pellino E3 ubiquitin protein ligase family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23892723) TreeGrafter
MGI		 PMID:23892723 GO_REF:0000118 NCBI chr18:50,870,483...50,881,089
Ensembl chr18:50,872,426...50,879,826 		JBrowse link
G PHF19 PHD finger protein 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:73,895,104...73,911,030 JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in ISO (MGI:5780352|PMID:26774286) UniProt PMID:26774286 MGI:5780352 NCBI chr 1:106,695,649...106,707,229
Ensembl chr 1:106,694,589...106,702,150 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G RNF115 ring finger protein 115 involved_in ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chr17:58,566,761...58,634,967
Ensembl chr17:58,571,694...58,660,663 		JBrowse link
G RNF126 ring finger protein 126 involved_in ISO (MGI:5582879|PMID:23418353) UniProt PMID:23418353 MGI:5582879 NCBI chr20:57,890,333...57,899,364
Ensembl chr20:57,891,413...57,898,863 		JBrowse link
G RNF135 ring finger protein 135 involved_in ISO (PMID:31006531) UniProt PMID:31006531 NCBI chr 9:40,794,772...40,809,022
Ensembl chr 9:40,795,297...40,808,737 		JBrowse link
G RNF152 ring finger protein 152 involved_in ISO (PMID:25936802) UniProt PMID:25936802 NCBI chr 1:14,914,508...15,001,843
Ensembl chr 1:14,985,769...14,986,380 		JBrowse link
G RNF167 ring finger protein 167 involved_in ISO (PMID:35114100) UniProt PMID:35114100 NCBI chr 5:31,673,540...31,676,705
Ensembl chr 5:31,674,284...31,676,441 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,542,209...29,575,127
Ensembl chr33:29,539,182...29,628,248 		JBrowse link
G RNF186 ring finger protein 186 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:78,915,131...78,916,909
Ensembl chr 2:78,915,339...78,916,037 		JBrowse link
G RNF213 ring finger protein 213 involved_in ISO (PMID:32139119), (PMID:33842849) UniProt PMID:32139119 PMID:33842849 NCBI chr 9:1,439,061...1,506,658
Ensembl chr 9:1,440,364...1,506,951 		JBrowse link
G RNF4 ring finger protein 4 involved_in ISO PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr 3:61,721,752...61,759,797
Ensembl chr 3:61,723,124...61,759,730 		JBrowse link
G RNF5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,571,277...1,575,151
Ensembl chr12:1,571,420...1,573,506 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:6,380,365...6,415,407
Ensembl chr12:6,292,459...6,415,382 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573 		JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:48,688,071...48,713,936
Ensembl chr 9:48,689,331...48,703,633 		JBrowse link
G TRAF3 TNF receptor associated factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:70,739,389...70,794,448
Ensembl chr 8:70,739,417...70,790,645 		JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,029,861...68,070,901
Ensembl chr12:68,030,197...68,058,518 		JBrowse link
G TRAF4 TNF receptor associated factor 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:42,933,638...42,940,033
Ensembl chr 9:42,933,750...42,939,520 		JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:9,812,019...9,831,955
Ensembl chr 7:9,812,132...9,831,955 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185 		JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336 		JBrowse link
G TRIM3 tripartite motif containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,766,086...29,782,573
Ensembl chr21:29,766,094...29,782,538 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in ISO (PMID:37943659) UniProt PMID:37943659 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:4849871|PMID:21074459) UniProt PMID:21074459 MGI:4849871 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753 		JBrowse link
G TRIM65 tripartite motif containing 65 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,713,535...4,720,268
Ensembl chr 9:4,714,086...4,718,592 		JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388 		JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:20,110,128...20,593,767
Ensembl chr23:20,130,230...20,486,399 		JBrowse link
G UBE2E3 ubiquitin conjugating enzyme E2 E3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr36:24,201,066...24,285,695
Ensembl chr36:24,187,672...24,445,417 		JBrowse link
G UBE2G1 ubiquitin conjugating enzyme E2 G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:30,332,277...30,430,225
Ensembl chr 5:30,334,968...30,427,529 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:41,470,073...41,470,738
Ensembl chr10:41,470,073...41,470,738 		JBrowse link
G UBE2O ubiquitin conjugating enzyme E2 O involved_in ISO (PMID:23452853) UniProt PMID:23452853 NCBI chr 9:4,294,192...4,310,971
Ensembl chr 9:4,254,649...4,310,589 		JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,283,171...102,287,460
Ensembl chr 1:102,283,171...102,287,459 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:719,128...726,128
Ensembl chr 7:719,116...725,898 		JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr24:36,570,172...36,601,200
Ensembl chr24:36,570,172...36,603,212 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:307,502...359,058
Ensembl chr29:307,525...357,962 		JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:79,806,424...79,926,846
Ensembl chr 5:79,806,425...79,957,830 		JBrowse link
G XIAP X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,300,234...95,356,103
Ensembl chr  X:95,331,827...95,351,582 		JBrowse link
G ZFP91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,762,200...37,809,070 JBrowse link
G ZNF598 zinc finger protein 598, E3 ubiquitin ligase involved_in ISO (PMID:36302773) UniProt PMID:36302773 NCBI chr 6:38,928,845...38,939,768
Ensembl chr 6:38,928,839...38,957,780 		JBrowse link
protein linear polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRF9 interferon regulatory factor 9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:4,152,146...4,157,201 JBrowse link
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:20,423,378...20,440,985
Ensembl chr24:20,423,988...20,441,114 		JBrowse link
G RNF216 ring finger protein 216 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:12,185,870...12,347,461
Ensembl chr 6:12,185,846...12,361,869 		JBrowse link
G RNF31 ring finger protein 31 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:4,141,501...4,151,999 JBrowse link
G SHARPIN SHANK associated RH domain interactor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:37,594,155...37,598,510
Ensembl chr13:37,594,203...37,599,456 		JBrowse link
regulation of protein K48-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCF25 transcription factor 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,697,627...63,729,780
Ensembl chr 5:63,681,752...63,729,684 		JBrowse link
regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SASH1 SAM and SH3 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr 1:39,221,243...39,478,057
Ensembl chr 1:39,146,020...39,476,914 		JBrowse link
regulation of protein polyubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:1,841,165...1,846,649
Ensembl chr35:1,841,123...1,846,663 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      primary metabolic process 9494
        protein metabolic process 4323
          protein modification process 1988
            post-translational protein modification 848
              protein modification by small protein conjugation or removal 809
                protein modification by small protein conjugation 774
                  protein ubiquitination 706
                    protein polyubiquitination 288
                      negative regulation of protein polyubiquitination + 9
                      positive regulation of protein polyubiquitination + 23
                      protein K11-linked ubiquitination 34
                      protein K27-linked ubiquitination 9
                      protein K29-linked ubiquitination 9
                      protein K33-linked ubiquitination 2
                      protein K48-linked ubiquitination + 82
                      protein K6-linked ubiquitination 17
                      protein K63-linked ubiquitination + 76
                      protein linear polyubiquitination + 7
                      regulation of protein polyubiquitination + 35
Path 2
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  biological_process 17878
    metabolic process 10933
      organic substance metabolic process 10478
        macromolecule metabolic process 8843
          protein metabolic process 4323
            protein modification process 1988
              post-translational protein modification 848
                protein modification by small protein conjugation or removal 809
                  protein modification by small protein conjugation 774
                    protein ubiquitination 706
                      protein polyubiquitination 288
                        negative regulation of protein polyubiquitination + 9
                        positive regulation of protein polyubiquitination + 23
                        protein K11-linked ubiquitination 34
                        protein K27-linked ubiquitination 9
                        protein K29-linked ubiquitination 9
                        protein K33-linked ubiquitination 2
                        protein K48-linked ubiquitination + 82
                        protein K6-linked ubiquitination 17
                        protein K63-linked ubiquitination + 76
                        protein linear polyubiquitination + 7
                        regulation of protein polyubiquitination + 35
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