Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:protein polyubiquitination
go back to main search page
Accession:GO:0000209 term browser browse the term
Definition:Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
Synonyms:exact_synonym: protein polyubiquitinylation;   protein polyubiquitylation
 related_synonym: polyubiquitin


show annotations for term's descendants       view all columns           Sort by:
 
protein polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMFR autocrine motility factor receptor JBrowse link 16 36,647,792 36,711,782 RGD:9068941
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 3 48,844,161 48,910,183 RGD:9068941
G ASB2 ankyrin repeat and SOCS box containing 2 JBrowse link 14 74,566,607 74,608,905 RGD:9068941
G AXIN1 axin 1 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 56,481,212 56,679,012 RGD:9068941
G BFAR bifunctional apoptosis regulator JBrowse link 16 13,558,912 13,597,023 RGD:9068941
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 97,298,736 97,324,966 RGD:9068941
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 10 97,958,527 98,159,550 RGD:9068941
G C10H10orf90 chromosome 10 C10orf90 homolog JBrowse link 10 122,987,122 123,243,653 RGD:9068941
G CBFB core-binding factor subunit beta JBrowse link 16 47,373,543 47,446,783 RGD:9068941
G CBL Cbl proto-oncogene JBrowse link 11 114,044,996 114,149,204 RGD:9068941
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme JBrowse link 19 592,856 602,811 RGD:9068941
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,803,862 21,831,322 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,104,940 41,145,934 RGD:9068941
G CUL3 cullin 3 JBrowse link 2B 111,714,533 111,827,080 RGD:9068941
G DCAF15 DDB1 and CUL4 associated factor 15 JBrowse link 19 13,514,672 13,523,689 RGD:9068941
G DDA1 DET1 and DDB1 associated 1 JBrowse link 19 16,797,750 16,808,427 RGD:9068941
G DDB2 damage specific DNA binding protein 2 JBrowse link 11 47,161,345 47,185,526 RGD:9068941
G DTL denticleless E3 ubiquitin protein ligase homolog JBrowse link 1 187,603,600 187,672,006 RGD:9068941
G DZIP3 DAZ interacting zinc finger protein 3 JBrowse link 3 105,714,315 105,819,594 RGD:9068941
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit JBrowse link 5 53,053,712 53,131,563 RGD:9068941
G FBXL17 F-box and leucine rich repeat protein 17 JBrowse link 5 103,214,110 103,739,494 RGD:9068941
G FBXL7 F-box and leucine rich repeat protein 7 JBrowse link 5 15,804,479 16,237,326 RGD:9068941
G FBXO22 F-box protein 22 JBrowse link 15 54,817,076 54,849,271 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G FBXW11 F-box and WD repeat domain containing 11 JBrowse link 5 167,207,643 167,354,730 RGD:9068941
G G2E3 G2/M-phase specific E3 ubiquitin protein ligase JBrowse link 14 11,338,212 11,398,545 RGD:9068941
G HDAC6 histone deacetylase 6 JBrowse link X 41,099,539 41,122,650 RGD:9068941
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 45,746,228 45,897,250 RGD:9068941
G IRF2BP1 interferon regulatory factor 2 binding protein 1 JBrowse link 19 42,893,381 42,896,189 RGD:9068941
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 30,690,172 30,840,504 RGD:9068941
G JADE2 jade family PHD finger 2 JBrowse link 5 129,929,127 129,986,367 RGD:9068941
G KLHL42 kelch like family member 42 JBrowse link 12 58,509,031 58,531,891 RGD:9068941
G LOC100974874 E3 ubiquitin-protein ligase CHFR JBrowse link 12 130,201,704 130,247,891 RGD:9068941
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 JBrowse link 9 98,571,796 98,623,581 RGD:9068941
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 5 57,116,405 57,197,017 RGD:9068941
G MARCHF1 membrane associated ring-CH-type finger 1 JBrowse link 4 155,791,599 156,639,456 RGD:9068941
G MARCHF5 membrane associated ring-CH-type finger 5 JBrowse link 10 89,038,753 89,101,305 RGD:9068941
G MARCHF8 membrane associated ring-CH-type finger 8 JBrowse link 10 42,539,079 42,677,277 RGD:9068941
G MGRN1 mahogunin ring finger 1 JBrowse link 16 3,550,352 3,615,693 RGD:9068941
G MKRN1 makorin ring finger protein 1 JBrowse link 7 132,391,357 132,417,395 RGD:9068941
G NFE2L1 nuclear factor, erythroid 2 like 1 JBrowse link 17 9,476,482 9,489,661 RGD:9068941
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link 6 17,969,146 17,970,962 RGD:9068941
G PELI1 pellino E3 ubiquitin protein ligase 1 JBrowse link 2A 64,160,362 64,213,200 RGD:9068941
G PPIL2 peptidylprolyl isomerase like 2 JBrowse link 22 3,788,603 3,821,090 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G PRPF19 pre-mRNA processing factor 19 JBrowse link 11 56,153,965 56,169,821 RGD:9068941
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 JBrowse link 20 615,987 639,366 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G RC3H1 ring finger and CCCH-type domains 1 JBrowse link 1 149,454,748 149,539,566 RGD:9068941
G RC3H2 ring finger and CCCH-type domains 2 JBrowse link 9 93,975,164 94,031,516 RGD:9068941
G RNF111 ring finger protein 111 JBrowse link 15 37,957,390 38,068,006 RGD:9068941
G RNF125 ring finger protein 125 JBrowse link 18 25,227,353 25,297,186 RGD:9068941
G RNF135 ring finger protein 135 JBrowse link 17 25,843,447 25,869,874 RGD:9068941
G RNF165 ring finger protein 165 JBrowse link 18 39,615,759 39,742,492 RGD:9068941
G RNF167 ring finger protein 167 JBrowse link 17 4,988,275 4,993,423 RGD:9068941
G RNF180 ring finger protein 180 JBrowse link 5 49,624,452 49,841,741 RGD:9068941
G RNF183 ring finger protein 183 JBrowse link 9 84,396,738 84,404,057 RGD:9068941
G RNF20 ring finger protein 20 JBrowse link 9 72,738,132 72,767,868 RGD:9068941
G RNF31 ring finger protein 31 JBrowse link 14 4,923,391 4,936,959 RGD:9068941
G RNF41 ring finger protein 41 JBrowse link 12 32,693,349 32,710,866 RGD:9068941
G RUSC1 RUN and SH3 domain containing 1 JBrowse link 1 130,665,390 130,675,635 RGD:9068941
G SASH1 SAM and SH3 domain containing 1 JBrowse link 6 146,154,178 146,368,101 RGD:9068941
G SHPRH SNF2 histone linker PHD RING helicase JBrowse link 6 143,628,076 143,751,370 RGD:9068941
G SKP1 S-phase kinase associated protein 1 JBrowse link 5 129,560,086 129,580,188 RGD:9068941
G SKP2 S-phase kinase associated protein 2 JBrowse link 5 74,179,608 74,211,563 RGD:9068941
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 7 90,995,923 91,112,240 RGD:9068941
G SPOP speckle type BTB/POZ protein JBrowse link 17 43,685,913 43,765,277 RGD:9068941
G STUB1 STIP1 homology and U-box containing protein 1 RGD:9068941
G TAF1 TATA-box binding protein associated factor 1 JBrowse link X 60,630,137 60,729,904 RGD:9068941
G TMEM129 transmembrane protein 129, E3 ubiquitin ligase JBrowse link 4 1,853,126 1,858,461 RGD:9068941
G TNKS tankyrase JBrowse link 8 9,435,412 9,654,810 RGD:9068941
G TNKS2 tankyrase 2 JBrowse link 10 88,547,396 88,612,973 RGD:9068941
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 9 32,314,850 32,327,067 RGD:9068941
G TRAF6 TNF receptor associated factor 6 JBrowse link 11 36,457,633 36,483,616 RGD:9068941
G TRIM21 tripartite motif containing 21 JBrowse link 11 4,588,083 4,596,942 RGD:9068941
G TRIM32 tripartite motif containing 32 JBrowse link 9 87,819,723 87,838,684 RGD:9068941
G TRIM6 tripartite motif containing 6 JBrowse link 11 5,731,256 5,748,057 RGD:9068941
G TRIP12 thyroid hormone receptor interactor 12 JBrowse link 2B 117,013,343 117,175,296 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
G UBE2D1 ubiquitin conjugating enzyme E2 D1 JBrowse link 10 54,867,346 54,903,125 RGD:9068941
G UBE2D2 ubiquitin conjugating enzyme E2 D2 JBrowse link 5 134,927,150 134,995,298 RGD:9068941
G UBE2D3 ubiquitin conjugating enzyme E2 D3 JBrowse link 4 95,218,319 95,293,053 RGD:9068941
G UBE2E1 ubiquitin conjugating enzyme E2 E1 JBrowse link 3 23,719,632 23,803,302 RGD:9068941
G UBE2L3 ubiquitin conjugating enzyme E2 L3 JBrowse link 22 3,690,100 3,746,665 RGD:9068941
G UBE3C ubiquitin protein ligase E3C JBrowse link 7 148,756,024 148,886,688 RGD:9068941
G UBE3D ubiquitin protein ligase E3D JBrowse link 6 80,729,751 80,962,322 RGD:9068941
G UBE4A ubiquitination factor E4A JBrowse link 11 113,193,986 113,233,660 RGD:9068941
G UBE4B ubiquitination factor E4B JBrowse link 1 8,801,707 8,949,465 RGD:9068941
G UBOX5 U-box domain containing 5 JBrowse link 20 3,196,189 3,246,238 RGD:9068941
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 8 98,904,557 99,064,121 RGD:9068941
G ZSWIM2 zinc finger SWIM-type containing 2 JBrowse link 2B 74,120,669 74,142,560 RGD:9068941
histone H2A K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RNF168 ring finger protein 168 JBrowse link 3 193,814,785 193,848,620 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
negative regulation of histone H2A K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 11 59,342,820 59,355,386 RGD:9068941
G TRIP12 thyroid hormone receptor interactor 12 JBrowse link 2B 117,013,343 117,175,296 RGD:9068941
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 8 98,904,557 99,064,121 RGD:9068941
negative regulation of protein K48-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TRIM44 tripartite motif containing 44 JBrowse link 11 35,633,985 35,782,260 RGD:9068941
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GPS2 G protein pathway suppressor 2 JBrowse link 17 7,346,766 7,349,682 RGD:9068941
G PARP10 poly(ADP-ribose) polymerase family member 10 JBrowse link 8 140,743,061 140,744,014 RGD:9068941
G PLAA phospholipase A2 activating protein JBrowse link 9 26,749,607 26,793,580 RGD:9068941
negative regulation of protein polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DYSF dysferlin JBrowse link 2A 71,495,573 71,730,073 RGD:9068941
positive regulation of protein K48-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 97,298,736 97,324,966 RGD:9068941
G NMI N-myc and STAT interactor JBrowse link 2B 8,574,385 8,603,486 RGD:9068941
positive regulation of protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 97,298,736 97,324,966 RGD:9068941
G DDX3X DEAD-box helicase 3 X-linked JBrowse link X 33,780,381 33,796,829 RGD:9068941
G NOD2 nucleotide binding oligomerization domain containing 2 JBrowse link 16 30,955,976 30,995,451 RGD:9068941
G PTPN22 protein tyrosine phosphatase non-receptor type 22 JBrowse link 1 88,685,736 88,743,164 RGD:9068941
positive regulation of protein linear polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G XIAP X-linked inhibitor of apoptosis JBrowse link X 113,052,164 113,105,160 RGD:9068941
positive regulation of protein polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 97,298,736 97,324,966 RGD:9068941
G BIRC3 baculoviral IAP repeat containing 3 JBrowse link 11 97,269,778 97,290,112 RGD:9068941
G FBXO4 F-box protein 4 JBrowse link 5 68,336,673 68,474,481 RGD:9068941
G HAMP hepcidin antimicrobial peptide JBrowse link 19 32,228,701 32,231,494 RGD:9068941
G MARCHF7 membrane associated ring-CH-type finger 7 JBrowse link 2B 47,004,211 47,059,901 RGD:9068941
G RNF40 ring finger protein 40 JBrowse link 16 24,194,293 24,207,460 RGD:9068941
G SKP2 S-phase kinase associated protein 2 JBrowse link 5 74,179,608 74,211,563 RGD:9068941
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 JBrowse link 3 138,085,136 138,181,747 RGD:9068941
G UBE2D1 ubiquitin conjugating enzyme E2 D1 JBrowse link 10 54,867,346 54,903,125 RGD:9068941
protein K11-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANAPC1 anaphase promoting complex subunit 1 JBrowse link 2A 90,143,737 90,262,215 RGD:9068941
G ANAPC10 anaphase promoting complex subunit 10 JBrowse link 4 137,339,959 137,445,172 RGD:9068941
G ANAPC11 anaphase promoting complex subunit 11 JBrowse link 17 76,297,262 76,305,826 RGD:9068941
G ANAPC13 anaphase promoting complex subunit 13 JBrowse link 3 131,524,227 131,532,624 RGD:9068941
G ANAPC2 anaphase promoting complex subunit 2 JBrowse link 9 108,234,949 108,248,227 RGD:9068941
G ANAPC4 anaphase promoting complex subunit 4 JBrowse link 4 19,777,750 19,817,459 RGD:9068941
G ANAPC5 anaphase promoting complex subunit 5 JBrowse link 12 118,906,482 118,950,913 RGD:9068941
G ANAPC7 anaphase promoting complex subunit 7 JBrowse link 12 107,946,756 107,977,489 RGD:9068941
G CDC16 cell division cycle 16 JBrowse link 13 95,300,763 95,340,762 RGD:9068941
G CDC23 cell division cycle 23 JBrowse link 5 133,566,022 133,591,528 RGD:9068941
G CDC26 cell division cycle 26 JBrowse link 9 84,364,810 84,373,406 RGD:9068941
G CDC27 cell division cycle 27 JBrowse link 17 10,259,194 10,331,011 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G RNF26 ring finger protein 26 JBrowse link 11 114,175,586 114,178,379 RGD:9068941
G RNF4 ring finger protein 4 JBrowse link 4 2,614,918 2,661,785 RGD:9068941
G UBE2A ubiquitin conjugating enzyme E2 A JBrowse link X 108,606,271 108,617,000 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
G UBE2C ubiquitin conjugating enzyme E2 C JBrowse link 20 42,152,219 42,156,246 RGD:9068941
G UBE2D3 ubiquitin conjugating enzyme E2 D3 JBrowse link 4 95,218,319 95,293,053 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2E2 ubiquitin conjugating enzyme E2 E2 JBrowse link 3 23,121,699 23,502,329 RGD:9068941
G UBE2E3 ubiquitin conjugating enzyme E2 E3 JBrowse link 2B 68,245,028 68,328,059 RGD:9068941
G UBE2H ubiquitin conjugating enzyme E2 H JBrowse link 7 121,796,629 121,917,981 RGD:9068941
G UBE2L3 ubiquitin conjugating enzyme E2 L3 JBrowse link 22 3,690,100 3,746,665 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
G UBE2W ubiquitin conjugating enzyme E2 W JBrowse link 8 70,315,767 70,413,148 RGD:9068941
protein K27-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RNF6 ring finger protein 6 JBrowse link 13 7,505,669 7,515,542 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
protein K29-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 30,690,172 30,840,504 RGD:9068941
G RNF186 ring finger protein 186 JBrowse link 1 18,770,083 18,772,399 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
protein K33-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KLHL20 kelch like family member 20 JBrowse link 1 149,232,858 149,303,357 RGD:9068941
protein K48-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMFR autocrine motility factor receptor JBrowse link 16 36,647,792 36,711,782 RGD:9068941
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 3 48,844,161 48,910,183 RGD:9068941
G BFAR bifunctional apoptosis regulator JBrowse link 16 13,558,912 13,597,023 RGD:9068941
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase JBrowse link 10 97,958,527 98,159,550 RGD:9068941
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme JBrowse link 19 592,856 602,811 RGD:9068941
G CUL1 cullin 1 JBrowse link 7 140,428,442 140,531,136 RGD:9068941
G DTX3L deltex E3 ubiquitin ligase 3L JBrowse link 3 119,654,019 119,664,918 RGD:9068941
G FBXO38 F-box protein 38 JBrowse link 5 143,814,446 143,873,919 RGD:9068941
G HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 JBrowse link 6 102,541,992 102,674,281 RGD:9068941
G IFI27 interferon alpha inducible protein 27 JBrowse link 14 74,742,775 74,748,820 RGD:9068941
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 30,690,172 30,840,504 RGD:9068941
G KLHL3 kelch like family member 3 JBrowse link 5 133,005,563 133,276,087 RGD:9068941
G MARCHF6 membrane associated ring-CH-type finger 6 JBrowse link 5 10,666,978 10,753,050 RGD:9068941
G NEDD4L NEDD4 like E3 ubiquitin protein ligase JBrowse link 18 51,428,077 51,792,995 RGD:9068941
G PELI1 pellino E3 ubiquitin protein ligase 1 JBrowse link 2A 64,160,362 64,213,200 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G RBX1 ring-box 1 JBrowse link 22 21,845,351 21,866,627 RGD:9068941
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase JBrowse link 17 21,696,808 21,779,878 RGD:9068941
G RNF115 ring finger protein 115 JBrowse link 1 121,936,054 122,016,273 RGD:9068941
G RNF146 ring finger protein 146 JBrowse link 6 125,057,312 125,079,096 RGD:9068941
G RNF152 ring finger protein 152 JBrowse link 18 55,180,955 55,264,164 RGD:9068941
G RNF187 ring finger protein 187 JBrowse link 1 203,889,146 203,896,884 RGD:9068941
G RNF216 ring finger protein 216 JBrowse link 7 5,872,118 6,037,073 RGD:9068941
G RNF34 ring finger protein 34 JBrowse link 12 118,998,436 119,022,823 RGD:9068941
G RNF4 ring finger protein 4 JBrowse link 4 2,614,918 2,661,785 RGD:9068941
G RNF5 ring finger protein 5 JBrowse link 6 31,825,799 31,828,188 RGD:9068941
G RNF6 ring finger protein 6 JBrowse link 13 7,505,669 7,515,542 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
G SKP1 S-phase kinase associated protein 1 JBrowse link 5 129,560,086 129,580,188 RGD:9068941
G SKP2 S-phase kinase associated protein 2 JBrowse link 5 74,179,608 74,211,563 RGD:9068941
G SYVN1 synoviolin 1 JBrowse link 11 60,489,626 60,496,945 RGD:9068941
G TNFAIP3 TNF alpha induced protein 3 JBrowse link 6 135,617,465 135,634,085 RGD:9068941
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link 9 32,314,850 32,327,067 RGD:9068941
G TRIM38 tripartite motif containing 38 JBrowse link 6 25,796,278 25,818,610 RGD:9068941
G TTC3 tetratricopeptide repeat domain 3 JBrowse link 21 23,435,041 23,564,416 RGD:9068941
G UBE2A ubiquitin conjugating enzyme E2 A JBrowse link X 108,606,271 108,617,000 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
G UBE2C ubiquitin conjugating enzyme E2 C JBrowse link 20 42,152,219 42,156,246 RGD:9068941
G UBE2D1 ubiquitin conjugating enzyme E2 D1 JBrowse link 10 54,867,346 54,903,125 RGD:9068941
G UBE2D2 ubiquitin conjugating enzyme E2 D2 JBrowse link 5 134,927,150 134,995,298 RGD:9068941
G UBE2D3 ubiquitin conjugating enzyme E2 D3 JBrowse link 4 95,218,319 95,293,053 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2E1 ubiquitin conjugating enzyme E2 E1 JBrowse link 3 23,719,632 23,803,302 RGD:9068941
G UBE2E2 ubiquitin conjugating enzyme E2 E2 JBrowse link 3 23,121,699 23,502,329 RGD:9068941
G UBE2E3 ubiquitin conjugating enzyme E2 E3 JBrowse link 2B 68,245,028 68,328,059 RGD:9068941
G UBE2G1 ubiquitin conjugating enzyme E2 G1 JBrowse link 17 4,321,294 4,416,936 RGD:9068941
G UBE2G2 ubiquitin conjugating enzyme E2 G2 JBrowse link 21 31,062,516 31,095,044 RGD:9068941
G UBE2H ubiquitin conjugating enzyme E2 H JBrowse link 7 121,796,629 121,917,981 RGD:9068941
G UBE2K ubiquitin conjugating enzyme E2 K JBrowse link 4 34,026,942 34,111,923 RGD:9068941
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 JBrowse link 15 54,754,642 54,814,264 RGD:9068941
G UBE2R2 ubiquitin conjugating enzyme E2 R2 JBrowse link 9 33,655,690 33,758,587 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
G UBE3A ubiquitin protein ligase E3A JBrowse link 15 4,494,029 4,595,415 RGD:9068941
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 8 98,904,557 99,064,121 RGD:9068941
G ZNRF1 zinc and ring finger 1 JBrowse link 16 55,567,875 55,679,524 RGD:9068941
protein K6-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BARD1 BRCA1 associated RING domain 1 JBrowse link 2B 101,984,287 102,068,523 RGD:9068941
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 14,197,946 14,279,064 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G RNF4 ring finger protein 4 JBrowse link 4 2,614,918 2,661,785 RGD:9068941
G RNF6 ring finger protein 6 JBrowse link 13 7,505,669 7,515,542 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 JBrowse link 3 48,844,161 48,910,183 RGD:9068941
G BFAR bifunctional apoptosis regulator JBrowse link 16 13,558,912 13,597,023 RGD:9068941
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,803,862 21,831,322 RGD:9068941
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 JBrowse link 14 11,871,973 11,979,548 RGD:9068941
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 30,690,172 30,840,504 RGD:9068941
G MAGEL2 MAGE family member L2 JBrowse link 15 6,017,523 6,021,849 RGD:9068941
G NEDD4 NEDD4 E3 ubiquitin protein ligase JBrowse link 15 34,798,880 34,963,823 RGD:9068941
G PELI1 pellino E3 ubiquitin protein ligase 1 JBrowse link 2A 64,160,362 64,213,200 RGD:9068941
G PELI3 pellino E3 ubiquitin protein ligase family member 3 JBrowse link 11 61,824,463 61,834,930 RGD:9068941
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 159,293,016 160,679,106 RGD:9068941
G PRPF19 pre-mRNA processing factor 19 JBrowse link 11 56,153,965 56,169,821 RGD:9068941
G RNF115 ring finger protein 115 JBrowse link 1 121,936,054 122,016,273 RGD:9068941
G RNF135 ring finger protein 135 JBrowse link 17 25,843,447 25,869,874 RGD:9068941
G RNF152 ring finger protein 152 JBrowse link 18 55,180,955 55,264,164 RGD:9068941
G RNF168 ring finger protein 168 JBrowse link 3 193,814,785 193,848,620 RGD:9068941
G RNF186 ring finger protein 186 JBrowse link 1 18,770,083 18,772,399 RGD:9068941
G RNF4 ring finger protein 4 JBrowse link 4 2,614,918 2,661,785 RGD:9068941
G RNF5 ring finger protein 5 JBrowse link 6 31,825,799 31,828,188 RGD:9068941
G RNF8 ring finger protein 8 JBrowse link 6 36,918,705 36,955,380 RGD:9068941
G STUB1 STIP1 homology and U-box containing protein 1 RGD:9068941
G TRAF2 TNF receptor associated factor 2 JBrowse link 9 107,938,935 107,984,797 RGD:9068941
G TRAF3IP2 TRAF3 interacting protein 2 JBrowse link 6 109,367,333 109,414,601 RGD:9068941
G TRAF6 TNF receptor associated factor 6 JBrowse link 11 36,457,633 36,483,616 RGD:9068941
G TRIM27 tripartite motif containing 27 JBrowse link 6 28,722,505 28,743,484 RGD:9068941
G TRIM5 tripartite motif containing 5 JBrowse link 11 5,798,336 5,819,876 RGD:9068941
G TRIM56 tripartite motif containing 56 JBrowse link 7 93,225,830 93,231,127 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
G UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link 7 40,295,047 40,324,705 RGD:9068941
G UBE2E2 ubiquitin conjugating enzyme E2 E2 JBrowse link 3 23,121,699 23,502,329 RGD:9068941
G UBE2E3 ubiquitin conjugating enzyme E2 E3 JBrowse link 2B 68,245,028 68,328,059 RGD:9068941
G UBE2G1 ubiquitin conjugating enzyme E2 G1 JBrowse link 17 4,321,294 4,416,936 RGD:9068941
G UBE2N ubiquitin conjugating enzyme E2 N JBrowse link 12 90,951,446 90,984,075 RGD:9068941
G UBE2O ubiquitin conjugating enzyme E2 O JBrowse link 17 70,337,622 70,400,967 RGD:9068941
G UBE2S ubiquitin conjugating enzyme E2 S JBrowse link 19 52,444,270 52,450,770 RGD:9068941
G UBE2T ubiquitin conjugating enzyme E2 T JBrowse link 1 177,929,298 177,939,027 RGD:9068941
G UBE2V1 ubiquitin conjugating enzyme E2 V1 JBrowse link 20 46,422,383 46,457,295 RGD:9068941
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 16 50,142,402 50,322,052 RGD:9068941
G ZFP91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase JBrowse link 11 53,833,437 53,875,435 RGD:9068941
protein linear polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 JBrowse link 20 615,987 639,366 RGD:9068941
G RNF31 ring finger protein 31 JBrowse link 14 4,923,391 4,936,959 RGD:9068941
G SHARPIN SHANK associated RH domain interactor JBrowse link 8 140,865,009 140,870,580 RGD:9068941
regulation of protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SASH1 SAM and SH3 domain containing 1 JBrowse link 6 146,154,178 146,368,101 RGD:9068941
regulation of protein polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXF2 forkhead box F2 JBrowse link 6 1,209,899 1,215,970 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12489
    metabolic process 7937
      cellular metabolic process 7294
        cellular macromolecule metabolic process 5664
          cellular protein metabolic process 3609
            cellular protein modification process 2949
              protein modification by small protein conjugation or removal 655
                protein modification by small protein conjugation 559
                  protein ubiquitination 510
                    protein polyubiquitination 181
                      negative regulation of protein polyubiquitination + 8
                      positive regulation of protein polyubiquitination + 15
                      protein K11-linked ubiquitination 27
                      protein K27-linked ubiquitination 4
                      protein K29-linked ubiquitination 5
                      protein K33-linked ubiquitination 1
                      protein K48-linked ubiquitination + 58
                      protein K6-linked ubiquitination 8
                      protein K63-linked ubiquitination + 49
                      protein linear polyubiquitination + 5
                      protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                      regulation of protein polyubiquitination + 25
Path 2
Term Annotations click to browse term
  biological_process 12489
    metabolic process 7937
      organic substance metabolic process 7622
        macromolecule metabolic process 6593
          protein metabolic process 3983
            protein modification process 2949
              cellular protein modification process 2949
                protein modification by small protein conjugation or removal 655
                  protein modification by small protein conjugation 559
                    protein ubiquitination 510
                      protein polyubiquitination 181
                        negative regulation of protein polyubiquitination + 8
                        positive regulation of protein polyubiquitination + 15
                        protein K11-linked ubiquitination 27
                        protein K27-linked ubiquitination 4
                        protein K29-linked ubiquitination 5
                        protein K33-linked ubiquitination 1
                        protein K48-linked ubiquitination + 58
                        protein K6-linked ubiquitination 8
                        protein K63-linked ubiquitination + 49
                        protein linear polyubiquitination + 5
                        protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process 0
                        regulation of protein polyubiquitination + 25
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.