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ONTOLOGY REPORT - ANNOTATIONS

Term:cytoplasmic ubiquitin ligase complex
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Accession:GO:0000153 term browser browse the term
Definition:A ubiquitin ligase complex found in the cytoplasm.


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Hrd1p ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM8A1 family with sequence similarity 8 member A1 part_of IEA Ensembl GO_REF:0000107 NCBI chr35:16,505,201...16,515,291
Ensembl chr35:16,505,291...16,512,023 		JBrowse link
Hrd1p ubiquitin ligase ERAD-L complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERL1 derlin 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr13:21,423,501...21,452,594
Ensembl chr13:21,419,352...21,482,133 		JBrowse link
G DERL2 derlin 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 5:31,319,660...31,330,846
Ensembl chr 5:31,319,717...31,330,841 		JBrowse link
G DERL3 derlin 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr26:28,688,307...28,690,400
Ensembl chr26:28,688,106...28,690,400 		JBrowse link
G RHBDD2 rhomboid domain containing 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 6:7,218,796...7,230,949
Ensembl chr 6:7,218,853...7,232,321 		JBrowse link
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase part_of IEA Ensembl GO_REF:0000107 NCBI chr 8:53,767,799...53,824,391
Ensembl chr 8:53,771,252...53,824,298 		JBrowse link
G SYVN1 synoviolin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:52,061,284...52,068,672
Ensembl chr18:52,060,347...52,067,582 		JBrowse link
VCB complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL2 cullin 2 ISO RGD PMID:10213691 RGD:2301042 NCBI chr 2:1,830,046...1,994,418
Ensembl chr 2:1,897,309...2,175,909 		JBrowse link
G ELOB elongin B part_of ISO
IEA		 RGD
InterPro
TreeGrafter		 PMID:10213691 GO_REF:0000002 GO_REF:0000118 RGD:2301042 NCBI chr 6:38,311,082...38,314,502
Ensembl chr 6:38,311,082...38,314,508 		JBrowse link
G ELOC elongin C ISO RGD PMID:10213691 RGD:2301042 NCBI chr29:22,452,254...22,476,523
Ensembl chr29:22,453,544...22,476,429 		JBrowse link
G NEURL2 neuralized E3 ubiquitin protein ligase 2 part_of ISO (PMID:14960280) MGI PMID:14960280 NCBI chr24:33,179,455...33,182,950
Ensembl chr24:33,180,731...33,182,714 		JBrowse link
G RBX1 ring-box 1 ISO RGD PMID:10213691 RGD:2301042 NCBI chr10:24,265,733...24,280,253
Ensembl chr10:24,266,408...24,280,235 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor part_of ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:9122164 PMID:10213691 GO_REF:0000033 GO_REF:0000118 RGD:1559276 RGD:2301042 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18903
    cellular anatomical entity 18651
      cytoplasm 11196
        cytoplasmic ubiquitin ligase complex 13
          ER ubiquitin ligase complex + 7
          VCB complex 6
          cytoplasmic SCF ubiquitin ligase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 18903
    protein-containing complex 6509
      catalytic complex 1846
        transferase complex 874
          ubiquitin ligase complex 323
            cytoplasmic ubiquitin ligase complex 13
              ER ubiquitin ligase complex + 7
              VCB complex 6
              cytoplasmic SCF ubiquitin ligase complex 0
paths to the root