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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear ubiquitin ligase complex
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Accession:GO:0000152 term browser browse the term
Definition:A ubiquitin ligase complex found in the nucleus.

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nuclear ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Babam2 BRISC and BRCA1 A complex member 2 located_in
part_of		 ISO
IEA		 (PMID:14636569) ComplexPortal
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chrNW_004936493:4,375,393...4,863,050
Ensembl chrNW_004936493:4,375,393...4,768,399 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 located_in
part_of		 ISO
IEA		 (PMID:14636569) ComplexPortal
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chrNW_004936586:2,200,211...2,272,781
Ensembl chrNW_004936586:2,200,205...2,273,307 		JBrowse link
G Brca1 BRCA1 DNA repair associated located_in ISO (PMID:14636569) ComplexPortal PMID:14636569 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated located_in ISO (PMID:14636569) ComplexPortal PMID:14636569 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 located_in
part_of		 ISO
IEA		 (PMID:14636569) ComplexPortal
Ensembl		 PMID:14636569 GO_REF:0000107 NCBI chrNW_004936927:341,114...380,817
Ensembl chrNW_004936927:341,253...376,700 		JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:14636569) ComplexPortal PMID:14636569 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248 		JBrowse link
anaphase-promoting complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936783:509,287...591,153
Ensembl chrNW_004936783:511,713...590,187 		JBrowse link
G Anapc10 anaphase promoting complex subunit 10 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936535:3,984,980...4,061,237
Ensembl chrNW_004936535:3,984,619...4,062,413 		JBrowse link
G Anapc11 anaphase promoting complex subunit 11 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:5,402,290...5,407,510
Ensembl chrNW_004936594:5,402,453...5,407,509 		JBrowse link
G Anapc13 anaphase promoting complex subunit 13 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936529:7,569,362...7,577,537 JBrowse link
G Anapc15 anaphase promoting complex subunit 15 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936498:1,460,795...1,468,363
Ensembl chrNW_004936498:1,463,810...1,468,351 		JBrowse link
G Anapc16 anaphase promoting complex subunit 16 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:6,680,119...6,696,661
Ensembl chrNW_004936521:6,678,755...6,697,488 		JBrowse link
G Anapc2 anaphase promoting complex subunit 2 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl		 PMID:27120157 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936669:797,475...808,952
Ensembl chrNW_004936669:797,318...811,721 		JBrowse link
G Anapc4 anaphase promoting complex subunit 4 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:27120157 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:4,134,449...4,166,496
Ensembl chrNW_004936477:4,134,403...4,166,537 		JBrowse link
G Anapc5 anaphase promoting complex subunit 5 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
InterPro
Ensembl		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:2,967,684...3,006,833
Ensembl chrNW_004936558:2,967,817...3,006,718 		JBrowse link
G Anapc7 anaphase promoting complex subunit 7 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl		 PMID:27120157 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:3,365,729...3,391,292
Ensembl chrNW_004936558:3,363,807...3,391,438 		JBrowse link
G Cdc16 cell division cycle 16 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl		 PMID:27120157 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004937030:217,078...242,126
Ensembl chrNW_004937030:216,744...241,196 		JBrowse link
G Cdc20 cell division cycle 20 part_of
located_in		 IEA
ISO		 (PMID:11459825) Ensembl
TreeGrafter
UniProt		 PMID:11459825 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:24,760,258...24,765,069
Ensembl chrNW_004936474:24,760,298...24,767,725 		JBrowse link
G Cdc20b cell division cycle 20B part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:12,593,216...12,640,661
Ensembl chrNW_004936480:12,593,216...12,640,661 		JBrowse link
G Cdc23 cell division cycle 23 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
InterPro
Ensembl		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:7,371,818...7,392,999
Ensembl chrNW_004936531:7,370,358...7,393,049 		JBrowse link
G Cdc26 cell division cycle 26 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
InterPro
Ensembl		 PMID:27120157 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936559:321,141...330,103
Ensembl chrNW_004936559:321,083...331,567 		JBrowse link
G Cdc27 cell division cycle 27 located_in
part_of		 ISO
IEA		 (PMID:27120157) ComplexPortal
TreeGrafter
Ensembl		 PMID:27120157 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936541:2,700,997...2,762,180
Ensembl chrNW_004936541:2,700,997...2,762,147 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:2,000,872...2,007,569
Ensembl chrNW_004936588:1,993,721...2,009,240 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 part_of
located_in		 IEA
ISO		 (PMID:11459825) Ensembl
UniProt		 PMID:11459825 GO_REF:0000107 NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901 		JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C part_of ISO (PMID:16413484), (PMID:18485873), (PMID:19822757) UniProt PMID:16413484 PMID:18485873 PMID:19822757 NCBI chrNW_004936514:7,204,332...7,208,340
Ensembl chrNW_004936514:7,199,539...7,207,655 		JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:643,358...648,293
Ensembl chrNW_004936886:640,745...648,531 		JBrowse link
BCOR complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcor BCL6 corepressor part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:6,764,043...6,812,194
Ensembl chrNW_004936502:6,764,907...6,792,916 		JBrowse link
BRCA1-BARD1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bard1 BRCA1 associated RING domain 1 located_in
part_of		 ISO
IEA		 (PMID:11573085) ComplexPortal
TreeGrafter
Ensembl		 PMID:11573085 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936586:2,200,211...2,272,781
Ensembl chrNW_004936586:2,200,205...2,273,307 		JBrowse link
G Brca1 BRCA1 DNA repair associated located_in
part_of		 ISO
IEA		 (PMID:11573085) ComplexPortal
TreeGrafter		 PMID:11573085 GO_REF:0000118 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Mtpn myotrophin part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936592:644,618...679,615
Ensembl chrNW_004936592:644,430...679,800 		JBrowse link
PRC1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmi1 BMI1 proto-oncogene, polycomb ring finger part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Cbx2 chromobox 2 part_of IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:3,886,926...3,902,459
Ensembl chrNW_004936594:3,893,772...3,900,000 		JBrowse link
G Cbx4 chromobox 4 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:3,943,933...3,950,124
Ensembl chrNW_004936594:3,943,924...3,950,196 		JBrowse link
G Cbx6 chromobox 6 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:2,522,126...2,532,382
Ensembl chrNW_004936492:2,521,553...2,532,516 		JBrowse link
G Cbx7 chromobox 7 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004936492:2,411,171...2,428,484
Ensembl chrNW_004936492:2,410,308...2,428,682 		JBrowse link
G Cbx8 chromobox 8 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:3,906,714...3,911,604
Ensembl chrNW_004936594:3,906,697...3,911,714 		JBrowse link
G Pcgf1 polycomb group ring finger 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936556:719,601...722,339
Ensembl chrNW_004936556:718,615...721,908 		JBrowse link
G Pcgf2 polycomb group ring finger 2 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pcgf3 polycomb group ring finger 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:22,349,166...22,373,256
Ensembl chrNW_004936477:22,349,171...22,373,393 		JBrowse link
G Pcgf5 polycomb group ring finger 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936601:3,201,589...3,268,990
Ensembl chrNW_004936601:3,207,250...3,267,372 		JBrowse link
G Pcgf6 polycomb group ring finger 6 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936600:2,714,883...2,741,418
Ensembl chrNW_004936600:2,714,843...2,741,697 		JBrowse link
G Phc1 polyhomeotic homolog 1 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936870:275,764...300,460
Ensembl chrNW_004936870:277,252...303,125 		JBrowse link
G Phc2 polyhomeotic homolog 2 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:16,147,699...16,252,073
Ensembl chrNW_004936474:16,145,496...16,236,854 		JBrowse link
G Phc3 polyhomeotic homolog 3 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936593:2,263,892...2,336,856
Ensembl chrNW_004936593:2,263,829...2,336,856 		JBrowse link
G Ring1 ring finger protein 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,643,129...25,646,928
Ensembl chrNW_004936476:25,642,411...25,647,202 		JBrowse link
G Rnf2 ring finger protein 2 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:5,070,578...5,110,087
Ensembl chrNW_004936481:5,070,578...5,110,068 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936593:2,475,199...2,500,593
Ensembl chrNW_004936593:2,472,946...2,500,604 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16767
    protein-containing complex 5555
      nuclear protein-containing complex 1213
        nuclear ubiquitin ligase complex 45
          Asi complex 0
          BCOR complex 1
          BRCA1-BARD1 complex 3
          CLRC complex 0
          PRC1 complex 17
          SUMO-targeted ubiquitin ligase complex 0
          anaphase-promoting complex 20
          nuclear SCF ubiquitin ligase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 16767
    cellular anatomical entity 16677
      organelle 11970
        membrane-bounded organelle 10943
          intracellular membrane-bounded organelle 10429
            nucleus 6467
              nuclear protein-containing complex 1213
                nuclear ubiquitin ligase complex 45
                  Asi complex 0
                  BCOR complex 1
                  BRCA1-BARD1 complex 3
                  CLRC complex 0
                  PRC1 complex 17
                  SUMO-targeted ubiquitin ligase complex 0
                  anaphase-promoting complex 20
                  nuclear SCF ubiquitin ligase complex 0
paths to the root