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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear ubiquitin ligase complex
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Accession:GO:0000152 term browser browse the term
Definition:A ubiquitin ligase complex found in the nucleus.


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nuclear ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Babam2 BRISC and BRCA1 A complex member 2 ISO
ISS
(PMID:14636569)
GO_REF:0000024
RGD
UniProt
PMID:14636569 GO_REF:0000024 NCBI chr 6:25,666,654...26,135,888
Ensembl chr 6:25,666,655...26,051,229
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:9,863,380...9,865,920
Ensembl chr 9:9,863,404...9,865,920
JBrowse link
anaphase-promoting complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 ISO
IBA
(PMID:16364912)
PMID:21873635
RGD PMID:16364912, PMID:21873635 RGD:13792537 NCBI chr 3:121,147,484...121,226,125
Ensembl chr 3:121,147,547...121,226,125
JBrowse link
G Anapc10 anaphase promoting complex subunit 10 ISO
IBA
(PMID:10318877), (PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:10318877 PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr19:31,814,686...31,867,928
Ensembl chr19:31,815,319...31,867,850
JBrowse link
G Anapc11 anaphase promoting complex subunit 11 ISO
IBA
(PMID:11739784), (PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:11739784 PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr10:109,774,779...109,785,877
Ensembl chr10:109,774,878...109,785,877
JBrowse link
G Anapc13 anaphase promoting complex subunit 13 ISO
IBA
(PMID:16364912)
PMID:21873635
RGD PMID:16364912, PMID:21873635 RGD:13792537 NCBI chr 8:111,107,358...111,115,774
Ensembl chr 8:111,107,358...111,115,774
JBrowse link
G Anapc15 anaphase promoting complex subunit 15 ISO
IBA
ISS
(PMID:21926987)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21926987, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:166,981,738...166,985,363
Ensembl chr 1:166,983,175...166,985,054
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 ISO
IBA
(PMID:20360068)
PMID:21873635
RGD PMID:20360068, PMID:21873635 RGD:13792537 NCBI chr20:29,544,626...29,558,928
Ensembl chr20:29,544,629...29,558,321
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 ISO
IBA
(PMID:16364912)
PMID:21873635
RGD PMID:16364912, PMID:21873635 RGD:13792537 NCBI chr 3:2,490,496...2,502,247
Ensembl chr 3:2,490,518...2,502,248
JBrowse link
G Anapc4 anaphase promoting complex subunit 4 ISO
IBA
(PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr14:60,471,962...60,503,803
Ensembl chr14:60,471,962...60,503,803
JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:16364912)
Ensembl
UniProt
RGD
PMID:16364912, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr12:39,209,134...39,242,696
Ensembl chr12:39,209,129...39,242,690
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 ISO
IBA
(PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr12:39,613,898...39,641,999
Ensembl chr12:39,614,733...39,641,285
JBrowse link
G Cdc16 cell division cycle 16 ISO
IBA
(PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr16:81,493,355...81,516,493
Ensembl chr16:81,493,355...81,516,493
JBrowse link
G Cdc20 cell division cycle 20 colocalizes_with ISO
IBA
ISS
(PMID:11459825)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11459825, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Cdc23 cell division cycle 23 ISO
IBA
(PMID:14657031), (PMID:16364912), (PMID:21926987)
PMID:21873635
RGD PMID:14657031 PMID:16364912 PMID:21926987, PMID:21873635 RGD:13792537 NCBI chr18:27,430,924...27,452,569
Ensembl chr18:27,430,905...27,452,420
JBrowse link
G Cdc26 cell division cycle 26 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:10922056), (PMID:16364912)
UniProt
RGD
PMID:10922056 PMID:16364912, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:78,252,168...78,267,137
Ensembl chr 5:78,253,397...78,267,063
JBrowse link
G Cdc27 cell division cycle 27 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:16364912), (PMID:21926987)
UniProt
RGD
PMID:16364912 PMID:21926987, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:92,551,754...92,602,214
Ensembl chr10:92,554,081...92,602,082
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 colocalizes_with ISO
IBA
(PMID:11459825)
PMID:21873635
RGD PMID:11459825, PMID:21873635 RGD:13792537 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 colocalizes_with ISO
ISS
(PMID:11459825)
GO_REF:0000024
RGD
UniProt
PMID:11459825 GO_REF:0000024 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C ISO (PMID:18485873), (PMID:19822757) RGD PMID:18485873 PMID:19822757 NCBI chr 3:161,236,971...161,239,371
Ensembl chr 3:161,236,898...161,241,159
JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S ISO
ISS
(PMID:19822757)
GO_REF:0000024
RGD
UniProt
PMID:19822757 GO_REF:0000024 NCBI chr 1:72,580,424...72,584,484
Ensembl chr 1:72,580,424...72,584,482
JBrowse link
BCOR complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcor BCL6 co-repressor ISO (PMID:16943429) RGD PMID:16943429 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
BRCA1-BARD1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bard1 BRCA1 associated RING domain 1 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:12890688), (PMID:15265711), (PMID:19117993), (PMID:20351172)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12890688 PMID:15265711 PMID:19117993 PMID:20351172, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 9:78,297,723...78,368,777
Ensembl chr 9:78,294,834...78,369,031
JBrowse link
G Brca1 BRCA1, DNA repair associated ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:12890688), (PMID:15265711), (PMID:19117993), (PMID:20351172)
GO_REF:0000104
UniProt
RGD
PMID:12890688 PMID:15265711 PMID:19117993 PMID:20351172, PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
PRC1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO
IBA
(PMID:12167701), (PMID:19636380)
PMID:21873635
RGD PMID:12167701 PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Cbx2 chromobox 2 ISO
IBA
(PMID:12167701), (PMID:19636380)
PMID:21873635
RGD PMID:12167701 PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr10:108,132,105...108,140,935
Ensembl chr10:108,132,105...108,140,935
JBrowse link
G Cbx4 chromobox 4 ISO (PMID:12167701), (PMID:19636380) RGD PMID:12167701 PMID:19636380 NCBI chr10:108,190,947...108,196,455
Ensembl chr10:108,190,995...108,196,217
JBrowse link
G Cbx7 chromobox 7 ISS
ISO
GO_REF:0000024
(MGI:4353923|PMID:19636380)
UniProt
RGD
PMID:19636380 GO_REF:0000024 MGI:4353923 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Cbx8 chromobox 8 ISO (PMID:12167701), (PMID:19636380) RGD PMID:12167701 PMID:19636380 NCBI chr10:108,148,073...108,150,511
Ensembl chr10:108,148,073...108,150,511
JBrowse link
G LOC103692167 polycomb group RING finger protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,776,680...114,779,447
Ensembl chr 4:114,776,797...114,779,446
JBrowse link
G Pcgf1 polycomb group ring finger 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,911,129...113,913,718
Ensembl chr 4:113,910,685...113,913,687
JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO
IBA
(PMID:19636380)
PMID:21873635
RGD PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Pcgf3 polycomb group ring finger 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:2,247,805...2,297,155
Ensembl chr14:2,247,808...2,297,155
JBrowse link
G Pcgf5 polycomb group ring finger 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:254,974,688...255,090,925
Ensembl chr 1:254,974,789...255,086,207
JBrowse link
G Pcgf6 polycomb group ring finger 6 ISO
IBA
ISS
(PMID:19636380)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19636380, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:266,811,418...266,831,022
Ensembl chr 1:266,811,420...266,830,976
JBrowse link
G Phc1 polyhomeotic homolog 1 ISO
IBA
(PMID:12167701), (PMID:19636380)
PMID:21873635
RGD PMID:12167701 PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr 4:155,093,947...155,118,838
Ensembl chr 4:155,093,949...155,116,154
JBrowse link
G Phc2 polyhomeotic homolog 2 ISO
IBA
(PMID:12167701), (PMID:19636380)
PMID:21873635
RGD PMID:12167701 PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr 5:146,832,552...146,931,444
Ensembl chr 5:146,882,756...146,931,444
JBrowse link
G Phc3 polyhomeotic homolog 3 ISO
IBA
(PMID:12167701), (PMID:19636380)
PMID:21873635
RGD PMID:12167701 PMID:19636380, PMID:21873635 RGD:13792537 NCBI chr 2:116,028,735...116,103,227
Ensembl chr 2:116,028,781...116,096,045
JBrowse link
G RGD1562871 similar to BMI1-like protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:79,546,624...79,547,767
Ensembl chr  X:79,546,624...79,547,767
JBrowse link
G Ring1 ring finger protein 1 ISS
ISO
IEA
GO_REF:0000024
(PMID:12167701), (PMID:19636380)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:12167701 PMID:19636380 GO_REF:0000002 GO_REF:0000024 NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834
JBrowse link
G Rnf2 ring finger protein 2 IEA
ISO
ISS
GO_REF:0000107
(PMID:12167701), (PMID:19636380)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12167701 PMID:19636380 GO_REF:0000024 GO_REF:0000107 NCBI chr13:68,829,714...68,859,920
Ensembl chr13:68,830,620...68,858,809
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    protein-containing complex 6107
      nuclear protein-containing complex 1237
        nuclear ubiquitin ligase complex 41
          Asi complex 0
          BCOR complex 1
          BRCA1-BARD1 complex 2
          CLRC complex 0
          PRC1 complex 17
          SUMO-targeted ubiquitin ligase complex 0
          anaphase-promoting complex 19
          nuclear SCF ubiquitin ligase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      organelle 13278
        membrane-bounded organelle 11263
          intracellular membrane-bounded organelle 10518
            nucleus 6987
              nuclear protein-containing complex 1237
                nuclear ubiquitin ligase complex 41
                  Asi complex 0
                  BCOR complex 1
                  BRCA1-BARD1 complex 2
                  CLRC complex 0
                  PRC1 complex 17
                  SUMO-targeted ubiquitin ligase complex 0
                  anaphase-promoting complex 19
                  nuclear SCF ubiquitin ligase complex 0
paths to the root