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ONTOLOGY REPORT - ANNOTATIONS


Term:histone deacetylase complex
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Accession:GO:0000118 term browser browse the term
Definition:A protein complex that possesses histone deacetylase activity.
Comment:Note that this term represents a location, not a function; the activity possessed by this complex is mentioned in the definition for the purpose of describing and distinguishing the complex. The function of this complex is represented by the molecular function term 'histone deacetylase activity ; GO:0004407'.
Synonyms:exact_synonym: HDAC complex


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histone deacetylase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbx5 chromobox 5 ISO (MGI:MGI:4359370|PMID:12242305) RGD PMID:12242305 MGI:MGI:4359370 NCBI chr 7:144,819,673...144,865,014
Ensembl chr 7:144,819,420...144,837,583
JBrowse link
G Dnttip1 deoxynucleotidyltransferase, terminal, interacting protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25653165)
Ensembl
UniProt
RGD
PMID:25653165 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:161,212,156...161,235,749
Ensembl chr 3:161,212,156...161,236,121
JBrowse link
G Hdac1 histone deacetylase 1 ISO
IBA
PR:Q80TZ9 (MGI:MGI:2683041|PMID:14645126)
PMID:21873635
RGD PMID:14645126, PMID:21873635 MGI:MGI:2683041, RGD:13792537 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac10 histone deacetylase 10 ISO (PMID:11861901) RGD PMID:11861901 NCBI chr 7:130,102,335...130,109,036
Ensembl chr 7:130,102,347...130,107,437
JBrowse link
G Hdac11 histone deacetylase 11 ISO (PMID:11948178) RGD PMID:11948178 NCBI chr 4:122,781,095...122,798,355
Ensembl chr 4:122,781,095...122,798,353
JBrowse link
G Hdac1l histone deacetylase 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:84,893,145...84,894,599
Ensembl chr 9:84,893,145...84,894,599
JBrowse link
G Hdac2 histone deacetylase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac3 histone deacetylase 3 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18326024)
Ensembl
RGD
PMID:18326024, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr18:31,073,057...31,094,347
Ensembl chr18:31,073,058...31,094,303
JBrowse link
G Hdac4 histone deacetylase 4 ISO (PMID:11804585) RGD PMID:11804585 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac6 histone deacetylase 6 ISO (PMID:11948178) RGD PMID:11948178 NCBI chr  X:15,295,372...15,316,673
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Hdac7 histone deacetylase 7 TAS
IEA
PMID:12711221
GO_REF:0000104
UniProt PMID:12711221 GO_REF:0000104, RGD:8553516 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Hdac8 histone deacetylase 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Hdac9 histone deacetylase 9 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Hint1 histidine triad nucleotide binding protein 1 ISO
ISS
(PMID:16835243)
GO_REF:0000024
RGD
UniProt
PMID:16835243 GO_REF:0000024 NCBI chr10:40,208,236...40,211,981
Ensembl chr10:40,208,223...40,211,975
JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor IDA
IBA
matrix-associated deacetylase (MAD) bodies
PMID:21873635
RGD
GO_Central
PMID:11641275, PMID:21873635 RGD:1599577, RGD:13792537 NCBI chr15:52,241,801...52,261,276
Ensembl chr15:52,241,801...52,261,276
JBrowse link
G Jmjd1c jumonji domain containing 1C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672
JBrowse link
G Kdm3a lysine demethylase 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:99,503,160...99,547,315
Ensembl chr 4:99,503,176...99,546,905
JBrowse link
G Kdm3b lysine demethylase 3B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,593,823...27,631,129
Ensembl chr18:27,576,129...27,631,088
JBrowse link
G LOC102552640 REST corepressor 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:19,603,294...19,609,393
Ensembl chr15:19,603,288...19,609,382
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO (MGI:MGI:1932601|PMID:11274056) RGD PMID:11274056 MGI:MGI:1932601 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Mecom MDS1 and EVI1 complex locus colocalizes_with ISO (PMID:11568182) RGD PMID:11568182 NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link
G Mideas mitotic deacetylase associated SANT domain protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:107,633,762...107,703,462
Ensembl chr 6:107,633,716...107,678,156
JBrowse link
G Mta2 metastasis associated 1 family, member 2 ISO (MGI:MGI:1342369|PMID:10444591) RGD PMID:10444591 MGI:MGI:1342369 NCBI chr 1:225,140,863...225,149,584
Ensembl chr 1:225,140,863...225,149,583
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO
IBA
(PMID:18326024)
PMID:21873635
RGD PMID:18326024, PMID:21873635 RGD:13792537 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO
IBA
(MGI:MGI:3580040|PMID:15832170)
PMID:21873635
RGD PMID:15832170, PMID:21873635 MGI:MGI:3580040, RGD:13792537 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO UniProtKB:O15379 (MGI:MGI:3688074|PMID:11278635) RGD PMID:11278635 MGI:MGI:3688074 NCBI chr11:14,658,225...14,742,478
Ensembl chr11:14,658,225...14,741,563
JBrowse link
G Phf21a PHD finger protein 21A ISO
IBA
(PMID:15325272)
PMID:21873635
RGD PMID:15325272, PMID:21873635 RGD:13792537 NCBI chr 3:81,099,765...81,271,841
Ensembl chr 3:81,134,505...81,271,849
JBrowse link
G Rcor1 REST corepressor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:135,475,470...135,552,155
Ensembl chr 6:135,513,650...135,548,201
Ensembl chr 6:135,513,650...135,548,201
JBrowse link
G Rcor2 REST corepressor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,513,970...222,525,356
Ensembl chr 1:222,519,615...222,524,779
JBrowse link
G Rcor2l1 REST corepressor 2-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:222,519,615...222,524,779
Ensembl chr15:222,519,615...222,524,779
JBrowse link
G Rcor3 REST corepressor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:110,822,149...110,864,469
Ensembl chr13:110,822,150...110,864,469
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats ISO PR:O09106 (MGI:MGI:2683041|PMID:14645126) RGD PMID:14645126 MGI:MGI:2683041 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G Sap30 Sin3A associated protein 30 ISO
IBA
(PMID:9651585)
PMID:21873635
RGD PMID:9651585, PMID:21873635 RGD:13792537 NCBI chr16:36,115,942...36,121,310
Ensembl chr16:36,116,258...36,121,097
JBrowse link
G Sap30l SAP30-like ISO
IBA
(PMID:18070604)
PMID:21873635
RGD PMID:18070604, PMID:21873635 RGD:13792537 NCBI chr10:43,224,151...43,231,864
Ensembl chr10:43,224,269...43,231,611
JBrowse link
G Satb2 SATB homeobox 2 ISO (MGI:MGI:3793380|PMID:18255031) RGD PMID:18255031 MGI:MGI:3793380 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Sin3a SIN3 transcription regulator family member A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:61,748,590...61,803,314
Ensembl chr 8:61,762,768...61,803,099
JBrowse link
G Sin3b SIN3 transcription regulator family member B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,842,456...18,860,086
Ensembl chr16:18,842,456...18,860,086
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor colocalizes_with ISO (PMID:19497860) RGD PMID:19497860 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked ISO
IBA
(PMID:18326024)
PMID:21873635
RGD PMID:18326024, PMID:21873635 RGD:13792537 NCBI chr  X:44,959,883...44,988,551
Ensembl chr  X:44,830,849...44,988,551
JBrowse link
G Tbl1xr1 TBL1X receptor 1 ISO
IBA
(PMID:18326024)
PMID:21873635
RGD PMID:18326024, PMID:21873635 RGD:13792537 NCBI chr 2:107,221,913...107,359,229
Ensembl chr 2:107,233,054...107,359,229
JBrowse link
G Trerf1 transcriptional regulating factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:15,653,230...15,881,695
Ensembl chr 9:15,655,735...15,700,312
JBrowse link
G Zfp217 zinc finger protein 217 ISO (PMID:18625718) RGD PMID:18625718 NCBI chr 3:166,981,419...167,022,349
Ensembl chr 3:166,983,220...166,994,286
JBrowse link
G Zfp541 zinc finger protein 541 ISO
IBA
(MGI:MGI:3831251|PMID:18849567)
PMID:21873635
RGD PMID:18849567, PMID:21873635 MGI:MGI:3831251, RGD:13792537 NCBI chr 1:77,957,188...77,993,816
Ensembl chr 1:77,967,755...77,992,027
JBrowse link
NuRD complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd3 chromodomain helicase DNA binding protein 3 ISO (MGI:MGI:1333986|PMID:10204490)
UniProtKB:O94776|UniProtKB:O95983|UniProtKB:Q09028|UniProtKB:Q92769 (PMID:17827154), (PMID:27068747)
RGD PMID:10204490, PMID:17827154, PMID:27068747 MGI:MGI:1333986 NCBI chr10:55,943,467...55,970,417
Ensembl chr10:55,943,446...55,965,216
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ISO (MGI:MGI:5429837|PMID:22075476)
(PMID:19644445)
RGD PMID:19644445, PMID:22075476 MGI:MGI:5429837 NCBI chr 4:157,612,531...157,645,660
Ensembl chr 4:157,612,536...157,645,659
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 ISO
ISS
(MGI:MGI:5559665|PMID:21931736)
GO_REF:0000024
RGD
UniProt
PMID:21931736 GO_REF:0000024, MGI:MGI:5559665 NCBI chr 5:169,519,212...169,572,059
Ensembl chr 5:169,519,212...169,567,107
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A ISO
IBA
(PMID:12183469)
PMID:21873635
RGD PMID:12183469, PMID:21873635 RGD:13792537 NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:189,654,871...189,735,056
Ensembl chr 2:189,655,702...189,733,540
JBrowse link
G Hdac1 histone deacetylase 1 ISO PR:Q8K4B0|PR:Q9R190|PR:Q9Z2D8 (MGI:MGI:2178733|PMID:11836251), (MGI:MGI:2683041|PMID:14645126), (MGI:MGI:3619832|PMID:16462733), (MGI:MGI:5429837|PMID:22075476)
(PMID:17827154), (PMID:19644445), (PMID:22926524)
RGD PMID:11836251, PMID:14645126, PMID:16462733, PMID:17827154, PMID:19644445, PMID:22075476, PMID:22926524 MGI:MGI:2178733, MGI:MGI:2683041, MGI:MGI:3619832, MGI:MGI:5429837 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO (PMID:17827154), (PMID:19644445), (PMID:22926524) RGD PMID:17827154, PMID:19644445, PMID:22926524 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 ISO PR:O09106|PR:Q8K4B0|PR:Q9R190 (MGI:MGI:3619832|PMID:16462733) RGD PMID:16462733 MGI:MGI:3619832 NCBI chr 7:12,179,046...12,186,251
Ensembl chr 7:12,179,203...12,186,656
JBrowse link
G Mta1 metastasis associated 1 ISO
IBA
IEA
PR:O09106|PR:Q9R190|PR:Q9Z2D8 (MGI:MGI:3619832|PMID:16462733)
PMID:21873635
(PMID:22926524)
GO_REF:0000107
RGD
Ensembl
PMID:16462733, PMID:22926524, PMID:21873635 GO_REF:0000107, MGI:MGI:3619832, RGD:13792537 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Mta2 metastasis associated 1 family, member 2 ISO
IBA
PR:O09106|PR:Q8K4B0|PR:Q9Z2D8 (MGI:MGI:2683041|PMID:14645126), (MGI:MGI:3619832|PMID:16462733)
PMID:21873635
(PMID:19644445), (PMID:22926524)
RGD PMID:14645126, PMID:16462733, PMID:19644445, PMID:22926524, PMID:21873635 MGI:MGI:2683041, MGI:MGI:3619832, RGD:13792537 NCBI chr 1:225,140,863...225,149,584
Ensembl chr 1:225,140,863...225,149,583
JBrowse link
G Mta3 metastasis associated 1 family, member 3 ISO
IBA
(PMID:22926524)
PMID:21873635
RGD PMID:22926524, PMID:21873635 RGD:13792537 NCBI chr 6:6,904,449...7,036,929
Ensembl chr 6:6,908,684...7,031,828
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (MGI:MGI:2683041|PMID:14645126)
(PMID:19644445), (PMID:22926524)
RGD PMID:14645126, PMID:19644445, PMID:22926524 MGI:MGI:2683041 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor ISO
ISS
(MGI:MGI:2683041|PMID:14645126)
(PMID:19644445), (PMID:22926524)
GO_REF:0000024
RGD
UniProt
PMID:14645126, PMID:19644445, PMID:22926524 GO_REF:0000024, MGI:MGI:2683041 NCBI chr  X:33,648,682...33,665,821
Ensembl chr  X:33,648,682...33,665,821
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO (MGI:MGI:2178733|PMID:11836251) RGD PMID:11836251 MGI:MGI:2178733 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a colocalizes_with ISS
ISO
IEA
GO_REF:0000024
(PMID:26816381)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26816381 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:11,429,266...11,446,119
Ensembl chr 7:11,432,049...11,444,786
JBrowse link
Sin3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024825.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:18,447,078...18,456,158 JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Hdac1 histone deacetylase 1 ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO (PMID:14966270), (PMID:17827154) RGD PMID:14966270, PMID:17827154 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 colocalizes_with ISO (PMID:11486045) RGD PMID:11486045 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Ing2 inhibitor of growth family, member 2 ISO (PMID:16387653) RGD PMID:16387653 NCBI chr16:47,714,756...47,725,836
Ensembl chr16:47,717,951...47,725,836
JBrowse link
G Morf4l1 mortality factor 4 like 1 ISO
ISS
(PMID:14966270)
GO_REF:0000024
RGD
UniProt
PMID:14966270 GO_REF:0000024 NCBI chr 8:97,473,454...97,494,974
Ensembl chr 8:97,474,092...97,494,834
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 colocalizes_with ISO
IBA
IEA
(PMID:11486045)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:11486045, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Phf12 PHD finger protein 12 ISO (PMID:22048773) RGD PMID:22048773 NCBI chr10:64,815,462...64,863,514
Ensembl chr10:64,815,462...64,862,268
JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO
IBA
(PMID:14966270), (PMID:17827154)
PMID:21873635
RGD PMID:14966270, PMID:17827154, PMID:21873635 RGD:13792537 NCBI chr 8:61,748,590...61,803,314
Ensembl chr 8:61,762,768...61,803,099
JBrowse link
G Sin3b SIN3 transcription regulator family member B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,842,456...18,860,086
Ensembl chr16:18,842,456...18,860,086
JBrowse link
G Sinhcaf SIN3-HDAC complex associated factor ISO
IBA
(PMID:22984288)
PMID:21873635
RGD PMID:22984288, PMID:21873635 RGD:13792537 NCBI chr 4:183,401,314...183,426,439
Ensembl chr 4:183,401,318...183,426,439
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component ISO (MGI:MGI:2670031|PMID:11909966) RGD PMID:11909966 MGI:MGI:2670031 NCBI chr12:45,199,012...45,221,507
Ensembl chr12:45,199,577...45,221,512
JBrowse link
Sin3-type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brms1 BRMS1, transcriptional repressor and anoikis regulator IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,325,352...220,334,616 JBrowse link
G Brms1l BRMS1 like transcriptional repressor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:76,675,399...76,708,261
NCBI chr 6:76,743,243...76,753,950
Ensembl chr 6:76,675,418...76,708,261
Ensembl chr 6:76,675,418...76,708,261
JBrowse link
G LOC108348098 breast cancer metastasis-suppressor 1 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,418,455...220,427,785
Ensembl chr 1:220,325,352...220,334,615
JBrowse link
G Phf12 PHD finger protein 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:64,815,462...64,863,514
Ensembl chr10:64,815,462...64,862,268
JBrowse link
G Sap130 Sin3A associated protein 130 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:24,397,523...24,497,831
Ensembl chr18:24,397,369...24,497,832
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:45,199,012...45,221,507
Ensembl chr12:45,199,577...45,221,512
JBrowse link
Swr1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr6 actin related protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:30,377,369...30,397,922
Ensembl chr 7:30,377,360...30,397,930
JBrowse link
G Anp32e acidic nuclear phosphoprotein 32 family member E ISO
ISS
(PMID:24463511)
GO_REF:0000024
RGD
UniProt
PMID:24463511 GO_REF:0000024 NCBI chr 2:198,040,573...198,057,005
Ensembl chr 2:198,040,536...198,057,003
JBrowse link
G Brd8 bromodomain containing 8 ISO (PMID:24463511) RGD PMID:24463511 NCBI chr18:27,375,645...27,423,989
Ensembl chr18:27,398,688...27,424,090
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,533,791...136,541,795
Ensembl chr 5:136,533,792...136,541,795
JBrowse link
G Ep400 E1A binding protein p400 ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:51,948,650...52,055,274
Ensembl chr12:51,948,650...52,055,271
JBrowse link
G Ing3 inhibitor of growth family, member 3 ISO
ISS
(PMID:24463511)
GO_REF:0000024
RGD
UniProt
PMID:24463511 GO_REF:0000024 NCBI chr 4:49,017,235...49,044,450
Ensembl chr 4:49,017,311...49,042,990
JBrowse link
G Kat5 lysine acetyltransferase 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24463511)
Ensembl
UniProt
RGD
PMID:24463511 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,854,580...1,856,333
Ensembl chr  X:1,854,751...1,856,258
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 ISO
IBA
ISS
(PMID:24463511)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24463511, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:120,411,917...120,447,458
Ensembl chr 4:120,411,991...120,447,455
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO
IBA
(PMID:24463511)
PMID:21873635
RGD PMID:24463511, PMID:21873635 RGD:13792537 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Srcap Snf2-related CREBBP activator protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,957,764...199,007,576
Ensembl chr 1:198,960,542...199,007,347
JBrowse link
G Trrap transformation/transcription domain-associated protein ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:11,537,950...11,627,563
Ensembl chr12:11,537,950...11,627,563
JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,726,643...22,732,917
Ensembl chr12:22,726,643...22,732,943
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      nucleoplasm 3397
        histone deacetylase complex 81
          Clr6 histone deacetylase complex I'' 0
          HDA1 complex 0
          NuRD complex 16
          Rpd3L-Expanded complex 0
          SHREC complex 0
          SHREC2 complex 0
          Set3 complex 0
          Sin3-type complex + 17
          Snt2C complex 0
          Swr1 complex 13
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        membrane-bounded organelle 11457
          intracellular membrane-bounded organelle 10714
            nucleus 7188
              nuclear lumen 4263
                nucleoplasm 3397
                  histone deacetylase complex 81
                    Clr6 histone deacetylase complex I'' 0
                    HDA1 complex 0
                    NuRD complex 16
                    Rpd3L-Expanded complex 0
                    SHREC complex 0
                    SHREC2 complex 0
                    Set3 complex 0
                    Sin3-type complex + 17
                    Snt2C complex 0
                    Swr1 complex 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.