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ONTOLOGY REPORT - ANNOTATIONS


Term:histone deacetylase complex
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Accession:GO:0000118 term browser browse the term
Definition:A protein complex that possesses histone deacetylase activity.
Comment:Note that this term represents a location, not a function; the activity possessed by this complex is mentioned in the definition for the purpose of describing and distinguishing the complex. The function of this complex is represented by the molecular function term 'histone deacetylase activity ; GO:0004407'.
Synonyms:exact_synonym: HDAC complex


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histone deacetylase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbx5 chromobox 5 part_of ISO (MGI:4359370|PMID:12242305) RGD PMID:12242305 MGI:4359370 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Dnttip1 deoxynucleotidyltransferase, terminal, interacting protein 1 part_of ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25653165)
UniProt
Ensembl
RGD
PMID:25653165 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:153,481,718...153,505,403
Ensembl chr 3:153,481,705...153,505,759
JBrowse link
G Hdac1 histone deacetylase 1 part_of IBA
ISO
PMID:21873635
(PMID:9651585)
PR:Q80TZ9 (MGI:2683041|PMID:14645126)
RGD PMID:9651585 PMID:14645126 PMID:21873635 MGI:2683041, RGD:13792537 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac10 histone deacetylase 10 part_of ISO (PMID:11861901) RGD PMID:11861901 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228
JBrowse link
G Hdac11 histone deacetylase 11 part_of ISO (PMID:11948178) RGD PMID:11948178 NCBI chr 4:123,645,873...123,667,407
Ensembl chr 4:123,650,157...123,667,405
JBrowse link
G Hdac1l histone deacetylase 1-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:80,453,139...80,454,593
Ensembl chr 9:80,453,139...80,454,593
JBrowse link
G Hdac2 histone deacetylase 2 part_of IBA
ISO
PMID:21873635
(PMID:9651585)
RGD PMID:9651585 PMID:21873635 RGD:13792537 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac3 histone deacetylase 3 part_of IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18326024)
Ensembl
RGD
PMID:18326024 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac4 histone deacetylase 4 part_of ISO (PMID:11804585) RGD PMID:11804585 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac6 histone deacetylase 6 part_of ISO (PMID:11948178) RGD PMID:11948178 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Hdac7 histone deacetylase 7 part_of TAS
IEA
PMID:12711221
GO_REF:0000104
UniProt PMID:12711221 GO_REF:0000104, RGD:8553516 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hdac8 histone deacetylase 8 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hdac9 histone deacetylase 9 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Hint1 histidine triad nucleotide binding protein 1 part_of ISS
ISO
GO_REF:0000024
(PMID:16835243)
UniProt
RGD
PMID:16835243 GO_REF:0000024 NCBI chr10:38,989,516...38,993,259 JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor part_of IDA
IBA
matrix-associated deacetylase (MAD) bodies
PMID:21873635
RGD
GO_Central
PMID:11641275 PMID:21873635 RGD:1599577, RGD:13792537 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
JBrowse link
G Jmjd1c jumonji domain containing 1C part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
JBrowse link
G Kdm3a lysine demethylase 3A part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Kdm3b lysine demethylase 3B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,380,859...26,436,701
Ensembl chr18:26,380,964...26,436,628
JBrowse link
G LOC102552640 REST corepressor 2-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Mbd2 methyl-CpG binding domain protein 2 part_of ISO (MGI:1932601|PMID:11274056) RGD PMID:11274056 MGI:1932601 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mecom MDS1 and EVI1 complex locus colocalizes_with
part_of
ISO
IEA
(PMID:11568182)
GO_REF:0000107
RGD
Ensembl
PMID:11568182 GO_REF:0000107 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Mideas mitotic deacetylase associated SANT domain protein part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:103,784,779...103,854,470
Ensembl chr 6:103,787,873...103,829,178
JBrowse link
G Mta2 metastasis associated 1 family, member 2 part_of ISO (MGI:1342369|PMID:10444591) RGD PMID:10444591 MGI:1342369 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 part_of ISO
IEA
(PMID:18326024)
GO_REF:0000107
RGD
Ensembl
PMID:18326024 GO_REF:0000107 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 part_of ISO (MGI:3580040|PMID:15832170) RGD PMID:15832170 MGI:3580040 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 part_of ISO UniProtKB:O15379 (MGI:3688074|PMID:11278635) RGD PMID:11278635 MGI:3688074 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761
JBrowse link
G Phf21a PHD finger protein 21A part_of IBA
ISO
PMID:21873635
(PMID:15325272)
RGD PMID:15325272 PMID:21873635 RGD:13792537 NCBI chr 3:78,158,760...78,331,903
Ensembl chr 3:78,194,549...78,331,865
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor part_of ISO (PMID:9651585) RGD PMID:9651585 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor part_of ISO (PMID:9651585) RGD PMID:9651585 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Rcor1 REST corepressor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:130,069,606...130,146,164
Ensembl chr 6:130,069,392...130,146,153
JBrowse link
G Rcor2 REST corepressor 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,453,403...204,461,403
Ensembl chr 1:204,454,360...204,460,838
JBrowse link
G Rcor3 REST corepressor 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:103,624,966...103,665,565
Ensembl chr13:103,624,971...103,665,565
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats part_of ISO PR:O09106 (MGI:2683041|PMID:14645126) RGD PMID:14645126 MGI:2683041 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Sap30 Sin3A associated protein 30 part_of ISO
IBA
(PMID:9651585)
PMID:21873635
RGD PMID:9651585 PMID:21873635 RGD:13792537 NCBI chr16:32,747,739...32,753,114
Ensembl chr16:32,747,734...32,753,112
JBrowse link
G Sap30l SAP30-like part_of IBA
ISO
PMID:21873635
(PMID:18070604)
RGD PMID:18070604 PMID:21873635 RGD:13792537 NCBI chr10:41,980,151...41,992,307
Ensembl chr10:41,979,687...41,987,658
JBrowse link
G Satb2 SATB homeobox 2 part_of ISO (MGI:3793380|PMID:18255031) RGD PMID:18255031 MGI:3793380 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707
JBrowse link
G Sin3a SIN3 transcription regulator family member A part_of IBA
ISO
PMID:21873635
(PMID:9651585)
RGD PMID:9651585 PMID:21873635 RGD:13792537 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Sin3b SIN3 transcription regulator family member B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,123,277...17,160,070
Ensembl chr16:17,123,434...17,159,978
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked part_of ISO
IBA
(PMID:18326024)
PMID:21873635
RGD PMID:18326024 PMID:21873635 RGD:13792537 NCBI chr  X:41,574,558...41,731,117
Ensembl chr  X:41,576,047...41,731,101
JBrowse link
G Tbl1xr1 TBL1X receptor 1 part_of IBA
ISO
PMID:21873635
(PMID:18326024)
RGD PMID:18326024 PMID:21873635 RGD:13792537 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Trerf1 transcriptional regulating factor 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:13,631,619...13,858,326
Ensembl chr 9:13,634,126...13,857,029
JBrowse link
G Zfp217 zinc finger protein 217 part_of ISO (PMID:18625718) RGD PMID:18625718 NCBI chr 3:158,890,464...158,931,148
Ensembl chr 3:158,892,265...158,913,040
JBrowse link
G Zfp541 zinc finger protein 541 part_of IBA
ISO
PMID:21873635
(MGI:3831251|PMID:18849567)
RGD PMID:18849567 PMID:21873635 MGI:3831251, RGD:13792537 NCBI chr 1:76,750,236...76,786,567
Ensembl chr 1:76,750,236...76,786,567
JBrowse link
NuRD complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd3 chromodomain helicase DNA binding protein 3 part_of ISO UniProtKB:O94776|UniProtKB:O95983|UniProtKB:Q09028|UniProtKB:Q92769 (PMID:17827154), (PMID:27068747)
(MGI:1333986|PMID:10204490)
RGD PMID:10204490 PMID:17827154 PMID:27068747 MGI:1333986 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 part_of ISO (PMID:19644445)
(MGI:5429837|PMID:22075476)
RGD PMID:19644445 PMID:22075476 MGI:5429837 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 part_of ISS
ISO
GO_REF:0000024
(MGI:5559665|PMID:21931736)
UniProt
RGD
PMID:21931736 GO_REF:0000024 MGI:5559665 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 part_of ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A part_of IBA
ISO
PMID:21873635
(PMID:12183469)
RGD PMID:12183469 PMID:21873635 RGD:13792537 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:175,748,594...175,829,837
Ensembl chr 2:175,749,433...175,825,542
JBrowse link
G Hdac1 histone deacetylase 1 part_of ISO (PMID:17827154), (PMID:19644445), (PMID:22926524)
PR:Q8K4B0|PR:Q9R190|PR:Q9Z2D8 (MGI:2178733|PMID:11836251), (MGI:2683041|PMID:14645126), (MGI:3619832|PMID:16462733), (MGI:5429837|PMID:22075476)
RGD PMID:11836251 PMID:14645126 PMID:16462733 PMID:17827154 PMID:19644445 More... MGI:2178733 MGI:2683041 MGI:3619832 MGI:5429837 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 part_of ISO (PMID:17827154), (PMID:19644445), (PMID:22926524) RGD PMID:17827154 PMID:19644445 PMID:22926524 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 part_of ISO PR:O09106|PR:Q8K4B0|PR:Q9R190 (MGI:3619832|PMID:16462733) RGD PMID:16462733 MGI:3619832 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mta1 metastasis associated 1 part_of ISO
IEA
IBA
(PMID:22926524)
PR:O09106|PR:Q9R190|PR:Q9Z2D8 (MGI:3619832|PMID:16462733)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:16462733 PMID:22926524 PMID:21873635 GO_REF:0000107 MGI:3619832, RGD:13792537 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Mta2 metastasis associated 1 family, member 2 part_of IBA
ISO
PMID:21873635
PR:O09106|PR:Q8K4B0|PR:Q9Z2D8 (MGI:2683041|PMID:14645126), (MGI:3619832|PMID:16462733)
(PMID:19644445), (PMID:22926524)
RGD PMID:14645126 PMID:16462733 PMID:19644445 PMID:22926524 PMID:21873635 MGI:2683041 MGI:3619832, RGD:13792537 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Mta3 metastasis associated 1 family, member 3 part_of IBA
ISO
PMID:21873635
(PMID:22926524)
RGD PMID:22926524 PMID:21873635 RGD:13792537 NCBI chr 6:10,867,028...10,987,221
Ensembl chr 6:10,867,011...10,986,883
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor part_of ISO (PMID:19644445), (PMID:22926524)
(MGI:2683041|PMID:14645126)
RGD PMID:14645126 PMID:19644445 PMID:22926524 MGI:2683041 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor part_of ISS
ISO
GO_REF:0000024
(MGI:2683041|PMID:14645126)
(PMID:19644445), (PMID:22926524)
UniProt
RGD
PMID:14645126 PMID:19644445 PMID:22926524 GO_REF:0000024 MGI:2683041 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Sall1 spalt-like transcription factor 1 part_of ISO (MGI:2178733|PMID:11836251) RGD PMID:11836251 MGI:2178733 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a colocalizes_with
part_of
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:26816381)
UniProt
Ensembl
RGD
PMID:26816381 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
Sin3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024825.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Csnk2a1 casein kinase 2 alpha 1 part_of ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Hdac1 histone deacetylase 1 part_of ISO (PMID:17827154) RGD PMID:17827154 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 part_of ISO (PMID:14966270), (PMID:17827154) RGD PMID:14966270 PMID:17827154 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Ing2 inhibitor of growth family, member 2 part_of ISO (PMID:16387653) RGD PMID:16387653 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Morf4l1 mortality factor 4 like 1 part_of ISO
ISS
(PMID:14966270)
GO_REF:0000024
RGD
UniProt
PMID:14966270 GO_REF:0000024 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519
JBrowse link
G Phf12 PHD finger protein 12 part_of ISO (PMID:22048773) RGD PMID:22048773 NCBI chr10:62,871,309...62,919,026
Ensembl chr10:62,872,195...62,919,000
JBrowse link
G Sin3a SIN3 transcription regulator family member A part_of IBA
ISO
PMID:21873635
(PMID:14966270), (PMID:17827154)
RGD PMID:14966270 PMID:17827154 PMID:21873635 RGD:13792537 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Sin3b SIN3 transcription regulator family member B part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,123,277...17,160,070
Ensembl chr16:17,123,434...17,159,978
JBrowse link
G Sinhcaf SIN3-HDAC complex associated factor part_of IBA
ISO
PMID:21873635
(PMID:22984288)
RGD PMID:22984288 PMID:21873635 RGD:13792537 NCBI chr 4:181,888,301...181,913,294
Ensembl chr 4:181,888,312...181,910,276
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component part_of ISO (MGI:2670031|PMID:11909966) RGD PMID:11909966 MGI:2670031 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
JBrowse link
Sin3-type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brms1 BRMS1, transcriptional repressor and anoikis regulator part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,345,766...202,355,028
Ensembl chr 1:202,345,704...202,355,028
JBrowse link
G Brms1l BRMS1 like transcriptional repressor part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:73,266,673...73,300,631
Ensembl chr 6:73,266,691...73,300,631
JBrowse link
G Phf12 PHD finger protein 12 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:62,871,309...62,919,026
Ensembl chr10:62,872,195...62,919,000
JBrowse link
G Sap130 Sin3A associated protein 130 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,244,337...23,345,368
Ensembl chr18:23,267,256...23,345,359
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
JBrowse link
Swr1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr6 actin related protein 6 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:24,150,250...24,171,057
Ensembl chr 7:24,150,250...24,171,067
JBrowse link
G Anp32e acidic nuclear phosphoprotein 32 family member E part_of ISS
ISO
GO_REF:0000024
(PMID:24463511)
UniProt
RGD
PMID:24463511 GO_REF:0000024 NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054
JBrowse link
G Brd8 bromodomain containing 8 part_of ISO (PMID:24463511) RGD PMID:24463511 NCBI chr18:26,181,744...26,230,035
Ensembl chr18:26,181,732...26,229,884
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742
JBrowse link
G Ep400 E1A binding protein p400 part_of ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861
JBrowse link
G Ing3 inhibitor of growth family, member 3 part_of ISS
ISO
GO_REF:0000024
(PMID:24463511)
UniProt
RGD
PMID:24463511 GO_REF:0000024 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Kat5 lysine acetyltransferase 5 part_of IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24463511)
Ensembl
UniProt
RGD
PMID:24463511 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 part_of ISO
IBA
ISS
(PMID:24463511)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24463511 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 part_of IBA
ISO
PMID:21873635
(PMID:24463511)
RGD PMID:24463511 PMID:21873635 RGD:13792537 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Srcap Snf2-related CREBBP activator protein part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,123,562...182,172,643
Ensembl chr 1:182,118,416...182,176,610
JBrowse link
G Trrap transformation/transcription domain-associated protein part_of ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674
JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,686,606...19,692,880
Ensembl chr12:19,686,148...19,692,880
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      catalytic complex 1464
        histone deacetylase complex 77
          Clr6 histone deacetylase complex I'' 0
          HDA1 complex 0
          NuRD complex 16
          Rpd3L-Expanded complex 0
          SHREC complex 0
          SHREC2 complex 0
          Set3 complex 0
          Sin3-type complex + 14
          Snt2C complex 0
          Swr1 complex 13
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      organelle 13093
        intracellular organelle 12741
          intracellular membrane-bounded organelle 11186
            nucleus 7028
              nuclear lumen 3928
                nucleoplasm 3464
                  histone deacetylase complex 77
                    Clr6 histone deacetylase complex I'' 0
                    HDA1 complex 0
                    NuRD complex 16
                    Rpd3L-Expanded complex 0
                    SHREC complex 0
                    SHREC2 complex 0
                    Set3 complex 0
                    Sin3-type complex + 14
                    Snt2C complex 0
                    Swr1 complex 13
paths to the root