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ONTOLOGY REPORT - ANNOTATIONS

Term:sulfur amino acid biosynthetic process
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Accession:GO:0000097 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine.
Synonyms:exact_synonym: sulfur amino acid anabolism;   sulfur amino acid biosynthesis;   sulfur amino acid formation;   sulfur amino acid synthesis;   sulphur amino acid biosynthesis;   sulphur amino acid biosynthetic process


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'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030387) UniProt
MGI
Ensembl		 PMID:15030387 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,618,737...49,638,054 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:87,866,631...87,882,623
Ensembl chr 2:87,866,621...87,882,716 		JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:200,882,954...200,934,389
Ensembl chr 1:200,882,956...200,934,445 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930 		JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:131,295,257...131,303,663
Ensembl chr 3:131,295,257...131,304,309 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:26,095,020...26,115,462
Ensembl chr 2:26,095,038...26,115,464 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15217352) RGD
MGI
InterPro		 PMID:15217352 PMID:15845641 GO_REF:0000002 RGD:1359026 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:87,866,631...87,882,623
Ensembl chr 2:87,866,621...87,882,716 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:135,775,743...135,802,404
Ensembl chr 8:135,775,745...135,802,388 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:65,348,609...65,354,892
Ensembl chr 2:65,348,006...65,355,118 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15217352) TreeGrafter
MGI
GO_Central		 PMID:15217352 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11158293) RGD
MGI
GO_Central
Ensembl
UniProt
InterPro		 PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 RGD:1359026 RGD:1601423 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G RNASEH1 ribonuclease H1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:131,268,908...131,277,072
Ensembl chr 3:131,268,926...131,281,930 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    metabolic process 10347
      cellular metabolic process 9044
        sulfur compound metabolic process 314
          sulfur amino acid metabolic process 31
            sulfur amino acid biosynthetic process 15
              cysteine biosynthetic process + 3
              ergothioneine biosynthetic process + 0
              homocysteine biosynthetic process + 0
              methionine biosynthetic process + 12
Path 2
Term Annotations click to browse term
  biological_process 17813
    metabolic process 10347
      small molecule metabolic process 1715
        organic acid metabolic process 928
          oxoacid metabolic process 910
            carboxylic acid metabolic process 891
              carboxylic acid biosynthetic process 307
                sulfur amino acid biosynthetic process 15
                  cysteine biosynthetic process + 3
                  ergothioneine biosynthetic process + 0
                  homocysteine biosynthetic process + 0
                  methionine biosynthetic process + 12
paths to the root