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ONTOLOGY REPORT - ANNOTATIONS


Term:sulfur amino acid metabolic process
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Accession:GO:0000096 term browser browse the term
Definition:The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine.
Synonyms:exact_synonym: sulfur amino acid metabolism;   sulphur amino acid metabolic process;   sulphur amino acid metabolism


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cysteine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1624291
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:1359024
RGD:1600115
RGD:1624291
G Ggt1 gamma-glutamyltransferase 1 JBrowse link 20 14,019,723 14,045,781 RGD:1624291
cysteine biosynthetic process from serine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1359024
RGD:13792537
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1600115
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:1624291
RGD:13792537
cysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdo1 cysteine dioxygenase type 1 JBrowse link 18 40,702,027 40,716,901 RGD:68765
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1624291
RGD:1600115
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:1624291
RGD:1600115
homocysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Blmh bleomycin hydrolase JBrowse link 10 63,197,367 63,240,447 RGD:13792537
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1600115
RGD:1624291
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:1624291
RGD:1600115
homocysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:634704
RGD:13792537
RGD:1624291
RGD:1359024
G Cps1 carbamoyl-phosphate synthase 1 JBrowse link 9 74,113,437 74,236,274 RGD:1624291
RGD:1600115
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:1359024
G Dpep1 dipeptidase 1 JBrowse link 19 55,973,447 55,998,830 RGD:1624291
RGD:1600115
G Mmut methylmalonyl-CoA mutase JBrowse link 9 23,323,934 23,352,144 RGD:1624291
RGD:1600115
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:2317121
RGD:1624291
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:1601423
RGD:7207080
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:1624291
RGD:13792537
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:1624291
RGD:1600115
L-cysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase JBrowse link 9 100,281,339 100,291,292 RGD:1624291
RGD:1600115
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1624291
G Cdo1 cysteine dioxygenase type 1 JBrowse link 18 40,702,027 40,716,901 RGD:2301357
RGD:13792537
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link 7 143,781,520 143,810,880 RGD:13800536
L-cysteine catabolic process to taurine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csad cysteine sulfinic acid decarboxylase JBrowse link 7 143,781,520 143,810,880 RGD:13800536
L-cysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdo1 cysteine dioxygenase type 1 JBrowse link 18 40,702,027 40,716,901 RGD:632438
L-methionine salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhmt betaine-homocysteine S-methyltransferase JBrowse link 2 23,236,573 23,256,158 RGD:1624291
RGD:1600115
G Bhmt2 betaine-homocysteine S-methyltransferase 2 JBrowse link 2 23,272,320 23,289,266 RGD:1624291
RGD:1600115
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adi1 acireductone dioxygenase 1 JBrowse link 6 47,940,211 47,947,173 RGD:1600115
RGD:1624291
G Apip APAF1 interacting protein JBrowse link 3 92,969,128 92,998,104 RGD:1600115
RGD:13792537
RGD:1624291
G Enoph1 enolase-phosphatase 1 JBrowse link 14 11,172,359 11,198,799 RGD:1600115
RGD:13792537
RGD:1624291
G Mri1 methylthioribose-1-phosphate isomerase 1 JBrowse link 19 25,360,299 25,366,283 RGD:1600115
RGD:13792537
G Mtap methylthioadenosine phosphorylase JBrowse link 5 107,711,077 107,777,530 RGD:1600115
RGD:13792537
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apip APAF1 interacting protein JBrowse link 3 92,969,128 92,998,104 RGD:1600115
G Enoph1 enolase-phosphatase 1 JBrowse link 14 11,172,359 11,198,799 RGD:1600115
G Mri1 methylthioribose-1-phosphate isomerase 1 JBrowse link 19 25,360,299 25,366,283 RGD:1600115
methionine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhmt betaine-homocysteine S-methyltransferase JBrowse link 2 23,236,573 23,256,158 RGD:1359026
RGD:1624291
G Bhmt2 betaine-homocysteine S-methyltransferase 2 JBrowse link 2 23,272,320 23,289,266 RGD:1600115
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
RGD:1600115
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:1600115
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1624291
RGD:13792537
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:1359026
RGD:1600115
RGD:1624291
RGD:1601423
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:1624291
RGD:13792537
methionine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mat1a methionine adenosyltransferase 1A JBrowse link 16 18,690,649 18,709,135 RGD:1600115
RGD:1624291
methionine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adi1 acireductone dioxygenase 1 JBrowse link 6 47,940,211 47,947,173 RGD:13792537
G Gnmt glycine N-methyltransferase JBrowse link 9 16,565,274 16,568,626 RGD:1624291
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1624291
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase JBrowse link 17 66,210,444 66,295,014 RGD:7207080
positive regulation of homocysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289784
prenylcysteine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcyox1 prenylcysteine oxidase 1 JBrowse link 4 118,187,133 118,198,029 RGD:1624291
RGD:1600115
G Pcyox1l prenylcysteine oxidase 1 like JBrowse link 18 57,021,081 57,031,552 RGD:1600115
regulation of cysteine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
RGD:1600115
regulation of sulfur amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
transsulfuration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbs cystathionine beta synthase JBrowse link 20 10,361,987 10,386,663 RGD:1600624
RGD:13792537
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:1600762
RGD:13792537
RGD:1600115
RGD:1624291
G LOC103691744 cystathionine gamma-lyase JBrowse link 2 264,747,068 264,765,112 RGD:1600115
G Mpst mercaptopyruvate sulfurtransferase JBrowse link 7 119,626,636 119,631,317 RGD:9685559
RGD:13792537
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
G Tst thiosulfate sulfurtransferase JBrowse link 7 119,616,323 119,623,072 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18157
    metabolic process 10835
      primary metabolic process 9749
        cellular amino acid metabolic process 264
          sulfur amino acid metabolic process 35
            cysteine metabolic process + 13
            ergothioneine metabolic process + 0
            homocysteine metabolic process + 15
            homomethionine metabolic process + 0
            methionine metabolic process + 14
            negative regulation of sulfur amino acid metabolic process + 0
            positive regulation of sulfur amino acid metabolic process + 1
            prenylcysteine metabolic process + 2
            regulation of sulfur amino acid metabolic process + 3
            sulfur amino acid biosynthetic process + 15
            sulfur amino acid catabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 18157
    cellular process 16260
      cellular metabolic process 9902
        organic acid metabolic process 986
          oxoacid metabolic process 961
            carboxylic acid metabolic process 916
              cellular amino acid metabolic process 264
                sulfur amino acid metabolic process 35
                  cysteine metabolic process + 13
                  ergothioneine metabolic process + 0
                  homocysteine metabolic process + 15
                  homomethionine metabolic process + 0
                  methionine metabolic process + 14
                  negative regulation of sulfur amino acid metabolic process + 0
                  positive regulation of sulfur amino acid metabolic process + 1
                  prenylcysteine metabolic process + 2
                  regulation of sulfur amino acid metabolic process + 3
                  sulfur amino acid biosynthetic process + 15
                  sulfur amino acid catabolic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.