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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of transcription involved in G1/S transition of mitotic cell cycle
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Accession:GO:0000083 term browser browse the term
Definition:Any process that regulates transcription such that the target genes are involved in the transition between G1 and S phase of the mitotic cell cycle.



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regulation of transcription involved in G1/S transition of mitotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:21555518) RGD PMID:21555518 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447
JBrowse link
G Brd4 bromodomain containing 4 acts_upstream_of_or_within ISO (PMID:18039861) RGD PMID:18039861 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Cdk14 cyclin-dependent kinase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:28,666,688...29,258,865
Ensembl chr 4:28,666,843...29,258,861
JBrowse link
G Cdk15 cyclin-dependent kinase 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:60,710,787...60,803,638
Ensembl chr 9:60,711,715...60,802,777
JBrowse link
G Cdk16 cyclin-dependent kinase 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,492,814...1,504,309
Ensembl chr  X:1,492,814...1,504,148
JBrowse link
G Cdk17 cyclin-dependent kinase 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:27,683,890...27,765,814
Ensembl chr 7:27,683,890...27,764,910
JBrowse link
G Cdk18 cyclin-dependent kinase 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:43,555,597...43,582,210
Ensembl chr13:43,556,748...43,588,525
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:23934193) RGD PMID:23934193 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G E2f4 E2F transcription factor 4 acts_upstream_of_or_within ISO MGI:1354159 (MGI:1861311|PMID:11004506), (MGI:3511714|PMID:15574595) RGD PMID:11004506 PMID:15574595 MGI:1861311 MGI:3511714 NCBI chr19:33,174,396...33,181,806
Ensembl chr19:33,174,410...33,181,806
JBrowse link
G E2f6 E2F transcription factor 6 acts_upstream_of_or_within ISO MGI:103012 (MGI:3511714|PMID:15574595) RGD PMID:15574595 MGI:3511714 NCBI chr 6:39,592,224...39,608,685
Ensembl chr 6:39,592,228...39,608,683
JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:15988025) RGD PMID:15988025 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Klf11 Kruppel-like factor 11 involved_in ISO (PMID:21171965) RGD PMID:21171965 NCBI chr 6:41,285,699...41,297,548
Ensembl chr 6:41,285,842...41,297,550
JBrowse link
G Npat nuclear protein, co-activator of histone transcription involved_in IBA
ISO
PMID:21873635
(PMID:15988025)
RGD PMID:15988025 PMID:21873635 RGD:13792537 NCBI chr 8:53,932,993...53,970,875
Ensembl chr 8:53,932,993...53,970,875
JBrowse link
G Tfdp1 transcription factor Dp-1 involved_in ISO (PMID:23934193) RGD PMID:23934193 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
negative regulation of transcription involved in G1/S transition of mitotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:20224733) RGD PMID:20224733 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22802528)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22802528 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q01094 (MGI:5285162|PMID:20224733)
Ensembl
RGD
PMID:20224733 GO_REF:0000107 MGI:5285162 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
positive regulation of transcription involved in G1/S transition of mitotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen-related receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:5823092|PMID:27723719)
UniProt
RGD
PMID:27723719 GO_REF:0000024 MGI:5823092 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:17068332) RGD PMID:17068332 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    cellular process 17586
      cell cycle process 1221
        mitotic cell cycle process 750
          regulation of transcription involved in G1/S transition of mitotic cell cycle 19
            negative regulation of transcription involved in G1/S transition of mitotic cell cycle 3
            positive regulation of transcription involved in G1/S transition of mitotic cell cycle 2
Path 2
Term Annotations click to browse term
  biological_process 18877
    metabolic process 11591
      cellular metabolic process 9831
        cellular aromatic compound metabolic process 5651
          nucleobase-containing compound metabolic process 5422
            nucleic acid metabolic process 4890
              RNA metabolic process 4323
                RNA biosynthetic process 3335
                  nucleic acid-templated transcription 3319
                    DNA-templated transcription 3317
                      regulation of DNA-templated transcription 3206
                        regulation of transcription involved in G1/S transition of mitotic cell cycle 19
                          negative regulation of transcription involved in G1/S transition of mitotic cell cycle 3
                          positive regulation of transcription involved in G1/S transition of mitotic cell cycle 2
paths to the root