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ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA binding
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Accession:GO:0000049 term browser browse the term
Definition:Binding to a transfer RNA.
Synonyms:narrow_synonym: base pairing with tRNA
 alt_id: GO:0000946


show annotations for term's descendants           Sort by:
tRNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064719.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Aars1 alanyl-tRNA synthetase 1 IPI RGD PMID:2040280 RGD:2302982 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090 		JBrowse link
G Aimp1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 enables ISO (PMID:11306575) RGD PMID:11306575 NCBI chr 2:221,151,907...221,175,458
Ensembl chr 2:221,151,904...221,175,728 		JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase enables ISO (PMID:27497299) RGD PMID:27497299 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Alkbh8 alkB homolog 8, tRNA methyltransferase enables ISO
IBA		 (PMID:22065580)
PMID:21873635		 RGD PMID:22065580 PMID:21873635 RGD:13792537 NCBI chr 6:378,779...449,382
Ensembl chr 6:378,100...452,165 		JBrowse link
G C17h6orf52 similar to human chromosome 6 open reading frame 52 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:23,753,359...23,776,251
Ensembl chr17:23,762,746...23,776,245 		JBrowse link
G Cars1 cysteinyl-tRNA synthetase 1 enables ISO (PMID:17303165)
(PMID:11347887)		 RGD PMID:11347887 PMID:17303165 NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941 		JBrowse link
G Ctu1 cytosolic thiouridylase subunit 1 enables IBA
ISS		 PMID:21873635
GO_REF:0000024		 UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:94,115,431...94,121,224
Ensembl chr 1:94,115,420...94,121,221 		JBrowse link
G Ctu2 cytosolic thiouridylase subunit 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:50,539,184...50,544,629
Ensembl chr19:50,539,352...50,544,623 		JBrowse link
G Dalrd3 DALR anticodon binding domain containing 3 enables ISO
ISS
IBA		 (PMID:32427860)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:32427860 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:109,264,100...109,268,560
Ensembl chr 8:109,265,676...109,268,568 		JBrowse link
G Dtd1 D-aminoacyl-tRNA deacylase 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:131,995,861...132,158,659 		JBrowse link
G Dus2 dihydrouridine synthase 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:33,906,517...33,954,922
Ensembl chr19:33,911,750...33,954,709 		JBrowse link
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:176,597,986...176,625,848
Ensembl chr 1:176,597,986...176,625,836 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 enables ISO (PMID:12426392) RGD PMID:12426392 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839 		JBrowse link
G Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific enables ISO (MGI:1888460|PMID:11265756), (MGI:1889405|PMID:10970870), (MGI:3619775|PMID:16508009), (MGI:5467162|PMID:22992746) RGD PMID:10970870 PMID:11265756 PMID:16508009 PMID:22992746 MGI:1888460 MGI:1889405 MGI:3619775 MGI:5467162 NCBI chr 4:120,719,616...120,915,779
Ensembl chr 4:120,707,133...120,915,779 		JBrowse link
G Eif1a eukaryotic translation initiation factor 1A enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:39,325,695...39,338,043
Ensembl chr18:39,325,202...39,338,696 		JBrowse link
G Eif2a eukaryotic translation initiation factor 2A enables ISO
IBA		 (PMID:12133843)
PMID:21873635		 RGD PMID:12133843 PMID:21873635 RGD:13792537 NCBI chr 2:142,761,303...142,794,767
Ensembl chr 2:142,761,416...142,795,068 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 enables ISS
ISO		 GO_REF:0000024
(MGI:5700304|PMID:16601681)		 UniProt
RGD		 PMID:16601681 GO_REF:0000024 MGI:5700304 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Eif2s3 eukaryotic translation initiation factor 2 subunit gamma contributes_to
enables		 IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr  X:58,916,513...58,939,923
Ensembl chr  X:58,917,490...58,940,686 		JBrowse link
G Eif2s3y eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked contributes_to
enables		 IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr  Y:869,654...889,341
Ensembl chr  Y:869,689...889,340 		JBrowse link
G Eif5b eukaryotic translation initiation factor 5B enables ISO (PMID:35732735) RGD PMID:35732735 NCBI chr 9:40,222,769...40,277,482
Ensembl chr 9:40,222,898...40,277,482 		JBrowse link
G Elp1 elongator acetyltransferase complex subunit 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:71,453,338...71,505,833
Ensembl chr 5:71,456,310...71,505,762 		JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:39,754,635...39,816,482
Ensembl chr15:39,754,632...39,816,445 		JBrowse link
G Elp5 elongator acetyltransferase complex subunit 5 contributes_to IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,692,526...54,704,255
Ensembl chr10:54,692,530...54,704,923 		JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial enables ISO
ISS
IEA		 (PMID:10329163)
GO_REF:0000024
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:10329163 GO_REF:0000002 GO_REF:0000024 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337 		JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:23,291,409...23,300,985
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
G Gtsf1 gametocyte specific factor 1 enables ISO (PMID:33789107) RGD PMID:33789107 NCBI chr 7:134,539,329...134,558,395
Ensembl chr 7:134,539,329...134,557,424 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 enables ISO
ISS
IEA		 (PMID:29040705)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:29040705 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Iars1 isoleucyl-tRNA synthetase 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237 		JBrowse link
G Iars2 isoleucyl-tRNA synthetase 2, mitochondrial enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,831,484...96,865,518
Ensembl chr13:96,831,484...96,865,501 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:19299493)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19299493 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514 		JBrowse link
G Kars1 lysyl-tRNA synthetase 1 enables IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:7372681 PMID:7082655 PMID:21873635 RGD:2303393, RGD:2303394, RGD:13792537 NCBI chr19:39,957,846...39,976,837
Ensembl chr19:39,957,846...39,977,632 		JBrowse link
G LOC100911093 CCA tRNA nucleotidyltransferase 1, mitochondrial-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:170,720,730...170,722,745
Ensembl chr 1:170,721,272...170,722,576 		JBrowse link
G LOC103690996 uncharacterized LOC103690996 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:6,072,279...6,072,780
Ensembl chr12:6,072,271...6,074,618
Ensembl chr 5:6,072,271...6,074,618 		JBrowse link
G Mettl1 methyltransferase 1, tRNA methylguanosine enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Mrps27 mitochondrial ribosomal protein S27 enables ISO (PMID:22841715) RGD PMID:22841715 NCBI chr 2:30,740,007...30,808,577
Ensembl chr 2:30,740,033...30,808,577 		JBrowse link
G Mtres1 mitochondrial transcription rescue factor 1 enables ISO (PMID:33243891) RGD PMID:33243891 NCBI chr20:47,022,343...47,038,888
Ensembl chr20:47,022,342...47,038,805 		JBrowse link
G Mtrfr mitochondrial translation release factor in rescue enables ISO (PMID:33243891) RGD PMID:33243891 NCBI chr12:32,261,569...32,275,258
Ensembl chr12:32,258,435...32,275,258 		JBrowse link
G Nat10 N-acetyltransferase 10 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:90,111,643...90,149,891
Ensembl chr 3:90,111,645...90,149,927 		JBrowse link
G Nemf nuclear export mediator factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:87,791,650...87,835,826
Ensembl chr 6:87,791,656...87,835,841 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Nsun6 NOP2/Sun RNA methyltransferase 6 enables ISO (PMID:26160102), (PMID:28531330) RGD PMID:26160102 PMID:28531330 NCBI chr17:77,912,374...77,955,694
Ensembl chr17:77,912,377...77,950,006 		JBrowse link
G Pstk phosphoseryl-tRNA kinase enables IBA
ISO		 PMID:21873635
(MGI:3052620|PMID:15317934)		 RGD PMID:15317934 PMID:21873635 MGI:3052620, RGD:13792537 NCBI chr 1:186,157,730...186,168,145
Ensembl chr 1:186,157,707...186,168,145 		JBrowse link
G Ptcd1 pentatricopeptide repeat domain 1 enables ISS
IBA		 GO_REF:0000024
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:9,445,656...9,463,434
Ensembl chr12:9,445,714...9,463,508 		JBrowse link
G Pus1 pseudouridine synthase 1 enables ISS
ISO		 GO_REF:0000024
(PMID:23707380)		 UniProt
RGD		 PMID:23707380 GO_REF:0000024 NCBI chr12:45,880,364...45,889,196
Ensembl chr12:45,880,440...45,889,196 		JBrowse link
G Rars1 arginyl-tRNA synthetase 1 IDA RGD PMID:7082655 RGD:2303394 NCBI chr10:20,270,744...20,295,192
Ensembl chr10:20,270,483...20,295,196 		JBrowse link
G Rpl35a ribosomal protein L35A enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942 		JBrowse link
G Rpl35a-ps6 ribosomal protein L35A, pseudogene 6 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:201,440,397...201,440,848
Ensembl chr 5:158,537,765...158,544,128 		JBrowse link
G Rpl6 ribosomal protein L6 IDA RGD PMID:7118887 RGD:11039446 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921 		JBrowse link
G Rps10 ribosomal protein S10 IDA RGD PMID:6873282 RGD:11040685 NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044
Ensembl chr 6:5,694,313...5,699,044 		JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 enables ISO (PMID:28082677) RGD PMID:28082677 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873 		JBrowse link
G Sars1 seryl-tRNA synthetase 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277 		JBrowse link
G Sars2 seryl-tRNA synthetase 2, mitochondrial enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,028,972...84,040,725
Ensembl chr 1:84,028,986...84,040,725 		JBrowse link
G Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase enables ISO (MGI:3689806|PMID:16230358) RGD PMID:16230358 MGI:3689806 NCBI chr14:58,311,484...58,341,745
Ensembl chr14:58,311,499...58,341,740 		JBrowse link
G Slfn13 schlafen family member 13 enables IBA
ISO		 PMID:21873635
(PMID:23000900)		 RGD PMID:23000900 PMID:21873635 RGD:13792537 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383 		JBrowse link
G Slfn2 schlafen family member 2 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:67,953,322...67,959,659
Ensembl chr10:67,953,171...67,959,458 		JBrowse link
G Ssb small RNA binding exonuclease protection factor La enables ISO (PMID:10983981) RGD PMID:10983981 NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203 		JBrowse link
G Syce2 synaptonemal complex central element protein 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:23,266,236...23,291,265
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
G Tert telomerase reverse transcriptase enables ISO (PMID:21937513) RGD PMID:21937513 NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561 		JBrowse link
G Trmt1 tRNA methyltransferase 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:23,456,756...23,471,581
Ensembl chr19:23,456,756...23,466,956 		JBrowse link
G Trmt10a tRNA methyltransferase 10A enables IBA
ISO
ISS
IEA		 PMID:21873635
(PMID:25053765)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:25053765 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 2:226,669,445...226,684,166
Ensembl chr 2:226,669,832...226,684,151 		JBrowse link
G Trmt10b tRNA methyltransferase 10B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:59,548,845...59,572,529
Ensembl chr 5:59,548,869...59,572,526 		JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit enables IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:29040705)		 UniProt
RGD		 PMID:29040705 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568 		JBrowse link
G Trmt11 tRNA methyltransferase 11 homolog enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:27,054,437...27,109,765
Ensembl chr 1:27,054,420...27,201,610 		JBrowse link
G Trmt1l tRNA methyltransferase 1-like enables IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr13:63,510,097...63,543,268
Ensembl chr13:63,510,204...63,543,266 		JBrowse link
G Trmt9b tRNA methyltransferase 9B (putative) enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:55,740,551...55,792,198
Ensembl chr16:55,743,018...55,792,144 		JBrowse link
G Trmu tRNA mitochondrial 2-thiouridylase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:116,969,750...116,987,704
Ensembl chr 7:116,969,756...116,986,355 		JBrowse link
G Trnau1ap tRNA selenocysteine 1 associated protein 1 enables IDA
IBA		 tRNASec (human)
PMID:21873635		 RGD
GO_Central		 PMID:10606267 PMID:21873635 RGD:633938, RGD:13792537 NCBI chr 5:144,507,044...144,524,142
Ensembl chr 5:144,507,615...144,524,131 		JBrowse link
G Trnt1 tRNA nucleotidyl transferase 1 enables IBA
ISO		 PMID:21873635
(PMID:11504732)		 RGD PMID:11504732 PMID:21873635 RGD:13792537 NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
G Tyw5 tRNA-yW synthesizing protein 5 enables IBA
ISO		 PMID:21873635
(PMID:20972222)		 RGD PMID:20972222 PMID:21873635 RGD:13792537 NCBI chr 9:58,961,100...58,979,188
Ensembl chr 9:58,961,106...58,979,188 		JBrowse link
G Wdr6 WD repeat domain 6 enables IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:32558197)		 Ensembl
UniProt
RGD		 PMID:32558197 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499 		JBrowse link
G Xpo5 exportin 5 enables ISO (MGI:3039231|PMID:12426392) RGD PMID:12426392 MGI:3039231 NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171 		JBrowse link
G Xpot exportin for tRNA enables ISO
IBA		 (PMID:9660920)
PMID:21873635		 RGD PMID:9660920 PMID:21873635 RGD:13792537 NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099 		JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 enables IEA GO_REF:0000043
GO_REF:0000104		 UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 5:141,535,815...141,564,029
Ensembl chr 5:141,535,759...141,563,833 		JBrowse link
G Yars2 tyrosyl-tRNA synthetase 2 enables ISO
IEA		 (PMID:20598274)
GO_REF:0000107		 RGD
Ensembl		 PMID:20598274 GO_REF:0000107 NCBI chr11:84,632,350...84,638,138
Ensembl chr11:84,624,369...84,638,125 		JBrowse link
G Yrdc yrdC N(6)-threonylcarbamoyltransferase domain containing enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:137,110,244...137,115,127
Ensembl chr 5:137,110,279...137,115,120 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20464
    binding 17452
      organic cyclic compound binding 6064
        nucleic acid binding 3804
          RNA binding 1553
            tRNA binding 77
              methionyl-initiator methionine tRNA binding 0
              tRNA modification guide activity + 0
paths to the root