ONTOLOGY REPORT - ANNOTATIONS
Term: autophagosome assembly
Accession: GO:0000045
browse the term
Definition: The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.
Synonyms: exact_synonym: autophagic vacuole assembly; autophagosome biosynthesis; autophagosome formation
narrow_synonym: PAS formation
related_synonym: autophagic vacuole formation
GViewer not supported for the selected species.
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912
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Ap4m1
adaptor related protein complex 4 subunit mu 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936543:246,335...250,278
Ensembl chrNW_004936543:246,335...254,975
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Ap5z1
adaptor related protein complex 5 subunit zeta 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:30930081)
MGI Ensembl
PMID:30930081
GO_REF:0000107
NCBI chrNW_004936765:1,112,333...1,123,244
Ensembl chrNW_004936765:1,111,882...1,123,316
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Atg10
autophagy related 10
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936469:1,241,854...1,506,174
Ensembl chrNW_004936469:1,242,111...1,505,743
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Atg101
autophagy related 101
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936512:9,518,128...9,525,986
Ensembl chrNW_004936512:9,518,074...9,526,961
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Atg12
autophagy related 12
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chrNW_004936742:1,000,029...1,007,885
Ensembl chrNW_004936742:999,771...1,007,885
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Atg13
autophagy related 13
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19211835)
MGI Ensembl InterPro
PMID:19211835
GO_REF:0000002 GO_REF:0000107
NCBI chrNW_004936562:2,424,398...2,473,103
Ensembl chrNW_004936562:2,423,001...2,473,232
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Atg14
autophagy related 14
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936495:155,709...195,860
Ensembl chrNW_004936495:154,593...195,917
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Atg16l1
autophagy related 16 like 1
involved_in
IEA
InterPro TreeGrafter Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936525:3,973,574...4,010,442
Ensembl chrNW_004936525:3,972,558...4,010,514
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Atg16l2
autophagy related 16 like 2
involved_in NOT|involved_in
IEA ISO
(PMID:22082872)
Ensembl UniProt InterPro
PMID:22082872
GO_REF:0000002 GO_REF:0000107
NCBI chrNW_004936498:2,070,985...2,084,141
Ensembl chrNW_004936498:2,070,881...2,083,968
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Atg2a
autophagy related 2A
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936599:4,417,810...4,437,639
Ensembl chrNW_004936599:4,417,900...4,437,178
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Atg2b
autophagy related 2B
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936604:583,391...641,217
Ensembl chrNW_004936604:584,480...641,183
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Atg3
autophagy related 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21220506)
Ensembl TreeGrafter MGI
PMID:21220506
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936536:232,343...257,949
Ensembl chrNW_004936536:232,192...257,954
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Atg4a
autophagy related 4A cysteine peptidase
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936499:6,641,192...6,691,685
Ensembl chrNW_004936499:6,640,957...6,691,995
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Atg4b
autophagy related 4B cysteine peptidase
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936745:291,311...308,469
Ensembl chrNW_004936745:292,746...307,746
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Atg4c
autophagy related 4C cysteine peptidase
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936692:439,475...532,633
Ensembl chrNW_004936692:439,280...532,657
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Atg4d
autophagy related 4D cysteine peptidase
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936659:823,318...830,642
Ensembl chrNW_004936659:823,172...830,521
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Atg5
autophagy related 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23704209)
RGD MGI Ensembl
PMID:16420522 PMID:23704209
GO_REF:0000107 RGD:1643189
NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
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Atg7
autophagy related 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23704209)
Ensembl TreeGrafter MGI
PMID:23704209
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
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Atg9a
autophagy related 9A
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15755735), (PMID:22456507) (PMID:23402761) (PMID:22456507)
MGI Ensembl
PMID:15755735 PMID:22456507 PMID:23402761
GO_REF:0000107
NCBI chrNW_004936569:1,635,958...1,645,600
Ensembl chrNW_004936569:1,635,836...1,645,815
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Atg9b
autophagy related 9B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15755735)
MGI Ensembl
PMID:15755735
GO_REF:0000107
NCBI chrNW_004936527:6,445,824...6,453,582
Ensembl chrNW_004936527:6,446,667...6,453,511
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Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936558:3,300,941...3,357,595
Ensembl chrNW_004936558:3,300,941...3,357,941
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Becn1
beclin 1
involved_in
ISO IEA
RGD TreeGrafter Ensembl UniProt
PMID:16420522
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1643189
NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
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Becn2
beclin 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936526:8,532,991...8,534,271
Ensembl chrNW_004936526:8,533,009...8,534,271
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Ctsd
cathepsin D
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15452145)
Ensembl MGI
PMID:15452145
GO_REF:0000107
NCBI chrNW_004936816:680,798...690,959
Ensembl chrNW_004936816:680,798...691,039
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Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936704:653,434...736,660
Ensembl chrNW_004936704:653,403...739,151
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Emc6
ER membrane protein complex subunit 6
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936677:367,364...368,268
Ensembl chrNW_004936677:367,341...368,265
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Epm2a
EPM2A glucan phosphatase, laforin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24430976)
Ensembl MGI
PMID:24430976
GO_REF:0000107
NCBI chrNW_004936625:761,013...819,826
Ensembl chrNW_004936625:738,124...821,566
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LOC101958458
T-cell-specific guanine nucleotide triphosphate-binding protein 2-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936826:912,414...918,490
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LOC101972667
immunity related GTPase M
involved_in
ISO
(PMID:16888103)
UniProt
PMID:16888103
NCBI chrNW_004936504:4,055,091...4,056,089
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LOC101973519
interferon-inducible GTPase 1-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936504:4,125,169...4,127,174
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LOC101976670
ubiquitin-like protein ATG12
involved_in
IEA
Ensembl InterPro
GO_REF:0000002 GO_REF:0000107
NCBI chrNW_004936673:2,861,475...2,862,529
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LOC106144852
interferon-inducible GTPase 1-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936504:4,173,569...4,181,993
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Map1lc3a
microtubule associated protein 1 light chain 3 alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
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Mtm1
myotubularin 1
involved_in acts_upstream_of
IEA ISO
(PMID:23695157)
Ensembl MGI
PMID:23695157
GO_REF:0000107
NCBI chrNW_004936714:1,792,893...1,870,338
Ensembl chrNW_004936714:1,792,845...1,870,389
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Nsfl1c
NSFL1 cofactor
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936485:17,217,462...17,238,253
Ensembl chrNW_004936485:17,217,462...17,238,628
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Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chrNW_004936621:172,727...206,803
Ensembl chrNW_004936621:175,387...206,662
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Pik3c3
phosphatidylinositol 3-kinase catalytic subunit type 3
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:24098492)
RGD TreeGrafter MGI Ensembl
PMID:12453151 PMID:24098492
GO_REF:0000107 GO_REF:0000118 RGD:2303129
NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422
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Psen1
presenilin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15452145)
Ensembl MGI
PMID:15452145
GO_REF:0000107
NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
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Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO
(PMID:22939626)
UniProt
PMID:22939626
NCBI chrNW_004936491:9,858,645...9,891,674
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Rab23
RAB23, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701
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Rab33b
RAB33B, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936535:8,167,567...8,183,105
Ensembl chrNW_004936535:8,167,551...8,183,111
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Rab7a
RAB7A, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176
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Rb1cc1
RB1 inducible coiled-coil 1
involved_in
IEA
Ensembl TreeGrafter InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936590:260,685...335,143
Ensembl chrNW_004936590:260,685...334,721
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Rufy4
RUN and FYVE domain containing 4
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936569:654,904...676,012
Ensembl chrNW_004936569:657,071...675,292
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Sting1
stimulator of interferon response cGAMP interactor 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936531:8,555,966...8,562,829
Ensembl chrNW_004936531:8,555,637...8,562,885
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Stx12
syntaxin 12
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936474:12,019,099...12,057,028
Ensembl chrNW_004936474:12,019,041...12,060,213
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Synpo2
synaptopodin 2
involved_in
ISO
PMID:23434281
UniProt
PMID:23434281
RGD:12793031
NCBI chrNW_004936869:321,821...461,253
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Tcirg1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23908015)
Ensembl MGI
PMID:23908015
GO_REF:0000107
NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206
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Tmem41b
transmembrane protein 41B
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936528:8,824,964...8,842,483
Ensembl chrNW_004936528:8,814,873...8,845,167
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Tp53inp1
tumor protein p53 inducible nuclear protein 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936544:7,882,710...7,891,668
Ensembl chrNW_004936544:7,881,102...7,891,463
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Tp53inp2
tumor protein p53 inducible nuclear protein 2
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936561:5,984,044...5,992,536
Ensembl chrNW_004936561:5,984,079...5,992,536
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Traf6
TNF receptor associated factor 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
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Trim32
tripartite motif containing 32
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856
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Ubqln1
ubiquilin 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679
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Ubqln2
ubiquilin 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920
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Ubxn2a
UBX domain protein 2A
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936493:7,969,271...7,978,537
Ensembl chrNW_004936493:7,971,960...7,985,314
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Ubxn2b
UBX domain protein 2B
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936496:4,520,334...4,564,358
Ensembl chrNW_004936496:4,532,714...4,559,562
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Ulk1
unc-51 like autophagy activating kinase 1
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
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Ulk2
unc-51 like autophagy activating kinase 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936821:1,051,247...1,162,500
Ensembl chrNW_004936821:1,051,053...1,162,735
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Ulk3
unc-51 like kinase 3
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936471:33,807,825...33,814,520
Ensembl chrNW_004936471:33,807,010...33,814,573
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Vmp1
vacuole membrane protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936490:3,532,985...3,648,009
Ensembl chrNW_004936490:3,532,985...3,647,967
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Wdr45
WD repeat domain 45
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936721:975,113...981,149
Ensembl chrNW_004936721:975,104...981,731
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Wdr45b
WD repeat domain 45B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936923:173,515...192,616
Ensembl chrNW_004936923:173,515...192,580
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Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936541:7,782,836...7,812,142
Ensembl chrNW_004936541:7,783,322...7,812,054
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Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936765:909,118...946,788
Ensembl chrNW_004936765:907,877...946,822
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Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323
G
Becn1
beclin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27994061)
Ensembl MGI
PMID:27994061
GO_REF:0000107
NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
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Ehmt2
euchromatic histone lysine methyltransferase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23918802)
Ensembl MGI
PMID:23918802
GO_REF:0000107
NCBI chrNW_004936727:1,648,451...1,663,294
Ensembl chrNW_004936727:1,648,448...1,663,455
G
Fez1
fasciculation and elongation protein zeta 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936743:1,871,808...1,917,370
Ensembl chrNW_004936743:1,871,664...1,903,245
G
Fez2
fasciculation and elongation protein zeta 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936663:1,576,311...1,637,363
Ensembl chrNW_004936663:1,576,269...1,623,296
G
LOC101959716
transmembrane protein 39A-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936531:7,196,458...7,198,575
G
Lrrk2
leucine rich repeat kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123
G
Mtm1
myotubularin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23695157)
Ensembl TreeGrafter MGI
PMID:23695157
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936714:1,792,893...1,870,338
Ensembl chrNW_004936714:1,792,845...1,870,389
G
Nupr1
nuclear protein 1, transcriptional regulator
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936501:11,998,064...11,999,431
Ensembl chrNW_004936501:11,997,834...11,999,709
G
Phf23
PHD finger protein 23
involved_in
IEA
Ensembl TreeGrafter
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004936595:528,832...533,212
Ensembl chrNW_004936595:528,516...533,235
G
Pink1
PTEN induced kinase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478
G
Scfd1
sec1 family domain containing 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936494:5,410,219...5,501,687
Ensembl chrNW_004936494:5,410,269...5,501,498
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Sec22b
SEC22 homolog B, vesicle trafficking protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936872:294,116...313,893
Ensembl chrNW_004936872:294,066...313,293
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Smcr8
SMCR8-C9orf72 complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936741:1,838,974...1,848,742
Ensembl chrNW_004936741:1,838,834...1,844,459
G
Tmem39a
transmembrane protein 39A
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936536:6,376,539...6,406,314
G
Atg2a
autophagy related 2A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:4,417,810...4,437,639
Ensembl chrNW_004936599:4,417,900...4,437,178
G
Atg7
autophagy related 7
ISO
RGD
PMID:33372336
RGD:407571673
NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
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Becn1
beclin 1
ISO
RGD
PMID:25561470
RGD:11561937
NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
G
Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936704:653,434...736,660
Ensembl chrNW_004936704:653,403...739,151
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Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406
G
Moap1
modulator of apoptosis 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936733:1,111,256...1,113,651
Ensembl chrNW_004936733:1,111,958...1,113,010
G
Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936520:5,383,737...5,540,176
Ensembl chrNW_004936520:5,383,737...5,540,203
G
Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936490:14,168,951...14,201,712
Ensembl chrNW_004936490:14,168,981...14,202,108
G
Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936646:1,737,088...1,748,056
Ensembl chrNW_004936646:1,737,034...1,748,057
G
Rab3gap1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936469:40,642,240...40,727,831
Ensembl chrNW_004936469:40,641,928...40,727,837
G
Rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936650:1,944,291...2,054,847
Ensembl chrNW_004936650:1,944,346...2,056,665
G
Ralb
RAS like proto-oncogene B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936469:50,237,804...50,279,483
Ensembl chrNW_004936469:50,236,409...50,279,583
G
Sh3glb1
SH3 domain containing GRB2 like, endophilin B1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936732:2,066,848...2,097,947
Ensembl chrNW_004936732:2,067,204...2,097,631
G
Snx18
sorting nexin 18
involved_in
ISO
(PMID:29437695)
UniProt
PMID:29437695
NCBI chrNW_004936480:13,108,510...13,137,550
G
Snx30
sorting nexin family member 30
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936559:684,536...792,829
Ensembl chrNW_004936559:690,397...792,835
G
Snx4
sorting nexin 4
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004937215:127,074...137,281
G
Snx7
sorting nexin 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936537:940,282...1,022,903
Ensembl chrNW_004936537:940,724...1,022,887
G
Trim32
tripartite motif containing 32
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856
G
Ulk1
unc-51 like autophagy activating kinase 1
ISO
RGD
PMID:23448468
RGD:13208863
NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
G
Wdr45
WD repeat domain 45
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936721:975,113...981,149
Ensembl chrNW_004936721:975,104...981,731
G
Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936541:7,782,836...7,812,142
Ensembl chrNW_004936541:7,783,322...7,812,054
G
Atg16l1
autophagy related 16 like 1
acts_upstream_of_or_within
ISO
(PMID:24954904)
MGI
PMID:24954904
NCBI chrNW_004936525:3,973,574...4,010,442
Ensembl chrNW_004936525:3,972,558...4,010,514
G
Atg5
autophagy related 5
acts_upstream_of_or_within
ISO
(PMID:23918802)
MGI
PMID:23918802
NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
G
LOC101972667
immunity related GTPase M
involved_in
ISO
(PMID:28389568)
UniProt
PMID:28389568
NCBI chrNW_004936504:4,055,091...4,056,089
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
acts_upstream_of_or_within
ISO
(PMID:24954904)
MGI
PMID:24954904
NCBI chrNW_004936765:909,118...946,788
Ensembl chrNW_004936765:907,877...946,822
G
Arfip2
ARF interacting protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936842:526,467...531,278
Ensembl chrNW_004936842:524,182...530,540
G
Atg13
autophagy related 13
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936562:2,424,398...2,473,103
Ensembl chrNW_004936562:2,423,001...2,473,232
G
Atg16l1
autophagy related 16 like 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24954904)
Ensembl MGI
PMID:24954904
GO_REF:0000107
NCBI chrNW_004936525:3,973,574...4,010,442
Ensembl chrNW_004936525:3,972,558...4,010,514
G
Atg4b
autophagy related 4B cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936745:291,311...308,469
Ensembl chrNW_004936745:292,746...307,746
G
Atg4d
autophagy related 4D cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936659:823,318...830,642
Ensembl chrNW_004936659:823,172...830,521
G
Atg9a
autophagy related 9A
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936569:1,635,958...1,645,600
Ensembl chrNW_004936569:1,635,836...1,645,815
G
Atg9b
autophagy related 9B
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004936527:6,445,824...6,453,582
Ensembl chrNW_004936527:6,446,667...6,453,511
G
Lrba
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
UniProt
PMID:33773106
NCBI chrNW_004936689:429,907...1,080,226
Ensembl chrNW_004936689:430,293...1,079,838
G
Mfn2
mitofusin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
G
Pacs2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chrNW_004936621:172,727...206,803
Ensembl chrNW_004936621:175,387...206,662
G
Pik3c3
phosphatidylinositol 3-kinase catalytic subunit type 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24098492)
Ensembl MGI
PMID:24098492
GO_REF:0000107
NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422
G
Stx17
syntaxin 17
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chrNW_004936524:8,324,562...8,381,244
Ensembl chrNW_004936524:8,324,569...8,376,114
G
Wipi2
WD repeat domain, phosphoinositide interacting 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24954904)
Ensembl MGI
PMID:24954904
GO_REF:0000107
NCBI chrNW_004936765:909,118...946,788
Ensembl chrNW_004936765:907,877...946,822
G
C9orf72
C9orf72-SMCR8 complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936611:2,074,655...2,101,846
Ensembl chrNW_004936611:2,078,716...2,101,881
G
Chek2
checkpoint kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
G
Efnb1
ephrin B1
involved_in acts_upstream_of_positive_effect
IEA ISO
(PMID:33280498)
Ensembl UniProt
PMID:33280498
GO_REF:0000107
NCBI chrNW_004936777:434,729...447,778
Ensembl chrNW_004936777:434,692...447,780
G
Ephb2
EPH receptor B2
involved_in acts_upstream_of_positive_effect
IEA ISO
(PMID:33280498)
Ensembl UniProt
PMID:33280498
GO_REF:0000107
NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
G
Ift20
intraflagellar transport 20
involved_in
ISO
(PMID:24089209)
UniProt
PMID:24089209
NCBI chrNW_004936538:4,484,484...4,491,688
G
Ift88
intraflagellar transport 88
involved_in
ISO
(PMID:24089209)
UniProt
PMID:24089209
NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
G
Mtmr3
myotubularin related protein 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004937211:67,199...92,204
Ensembl chrNW_004937211:55,221...92,040
G
Mtor
mechanistic target of rapamycin kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
G
Pikfyve
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078
G
Rab1b
RAB1B, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936599:3,317,258...3,324,208
Ensembl chrNW_004936599:3,317,258...3,324,213
G
Rnf186
ring finger protein 186
acts_upstream_of_positive_effect
ISO
(PMID:33280498)
UniProt
PMID:33280498
NCBI chrNW_004936474:5,947,077...5,947,772
G
Rnf5
ring finger protein 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23093945)
Ensembl MGI
PMID:23093945
GO_REF:0000107
NCBI chrNW_004936727:1,422,207...1,424,808
Ensembl chrNW_004936727:1,422,207...1,424,739
G
Tbc1d14
TBC1 domain family member 14
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936477:18,761,034...18,864,578
Ensembl chrNW_004936477:18,761,477...18,859,988
G
Ubqln2
ubiquilin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323
G
Stbd1
starch binding domain 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936676:300,244...304,206
Ensembl chrNW_004936676:299,963...304,213
G
Tom1
target of myb1 membrane trafficking protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004936492:5,073,274...5,103,733
Ensembl chrNW_004936492:5,073,191...5,103,739
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all