ONTOLOGY REPORT - ANNOTATIONS
Term: autophagosome assembly
Accession: GO:0000045
browse the term
Definition: The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.
Synonyms: exact_synonym: autophagic vacuole assembly; autophagosome biosynthesis; autophagosome formation
narrow_synonym: PAS formation
related_synonym: autophagic vacuole formation
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AMBRA1
autophagy and beclin 1 regulator 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:42,903,815...43,073,918
Ensembl chr18:42,932,513...43,072,827
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AP4M1
adaptor related protein complex 4 subunit mu 1
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:9,488,496...9,492,703
Ensembl chr 6:9,486,372...9,492,243
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AP5Z1
adaptor related protein complex 5 subunit zeta 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:30930081)
MGI Ensembl
PMID:30930081
GO_REF:0000107
NCBI chr 6:12,847,699...12,858,769
Ensembl chr 6:12,847,713...12,858,681
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ATG10
autophagy related 10
involved_in
ISO
(PMID:16963840)
UniProt
PMID:16963840
NCBI chr 3:25,214,203...25,436,448
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ATG101
autophagy related 101
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr27:2,931,595...2,934,914
Ensembl chr27:2,931,893...2,935,123
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ATG12
autophagy related 12
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr11:5,531,062...5,543,034
Ensembl chr11:5,531,759...5,542,743
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ATG13
autophagy related 13
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19211835)
MGI Ensembl InterPro
PMID:19211835
GO_REF:0000002 GO_REF:0000107
NCBI chr18:42,834,538...42,886,873
Ensembl chr18:42,836,755...42,886,855
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ATG14
autophagy related 14
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:31,199,097...31,234,200
Ensembl chr 8:31,201,709...31,234,217
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ATG16L1
autophagy related 16 like 1
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672
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ATG16L2
autophagy related 16 like 2
involved_in NOT|involved_in
IEA ISO
(PMID:22082872)
InterPro UniProt Ensembl
PMID:22082872
GO_REF:0000002 GO_REF:0000107
NCBI chr21:25,404,667...25,433,456
Ensembl chr21:25,405,694...25,419,896
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ATG2A
autophagy related 2A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:52,258,070...52,277,953
Ensembl chr18:52,258,187...52,277,965
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ATG3
autophagy related 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21220506)
Ensembl MGI
PMID:21220506
GO_REF:0000107
NCBI chr33:17,046,951...17,073,203
Ensembl chr33:17,046,973...17,073,150
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ATG4A
autophagy related 4A cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:81,629,346...81,688,086
Ensembl chr X:81,629,465...81,688,099
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ATG4B
autophagy related 4B cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr25:51,494,316...51,518,683
Ensembl chr25:51,504,537...51,517,659
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ATG4C
autophagy related 4C cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:47,273,387...47,359,452
Ensembl chr 5:47,188,816...47,359,402
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ATG4D
autophagy related 4D cysteine peptidase
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr20:50,618,458...50,623,703
Ensembl chr20:50,618,459...50,624,179
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ATG5
autophagy related 5
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23704209)
RGD MGI Ensembl
PMID:16420522 PMID:23704209
GO_REF:0000107 RGD:1643189
NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
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ATG7
autophagy related 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23704209)
Ensembl MGI
PMID:23704209
GO_REF:0000107
NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
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ATG9A
autophagy related 9A
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15755735), (PMID:22456507) (PMID:22456507) (PMID:23402761)
MGI Ensembl
PMID:15755735 PMID:22456507 PMID:23402761
GO_REF:0000107
NCBI chr37:25,768,287...25,777,529
Ensembl chr37:25,768,275...25,890,811
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ATG9B
autophagy related 9B
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15755735)
MGI Ensembl
PMID:15755735
GO_REF:0000107
NCBI chr16:15,072,436...15,082,867
Ensembl chr16:15,072,312...15,080,397
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ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
involved_in
ISS IBA IEA
UniProt GO_Central Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr26:8,148,181...8,209,392
Ensembl chr26:8,148,236...8,209,388
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BECN1
beclin 1
involved_in
ISO IEA
RGD Ensembl UniProt
PMID:16420522
GO_REF:0000104 GO_REF:0000107 RGD:1643189
NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
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CTSD
cathepsin D
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:15452145)
MGI Ensembl
PMID:15452145
GO_REF:0000107
NCBI chr18:46,010,440...46,019,457
Ensembl chr18:46,010,440...46,019,457
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ELAPOR1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:42,612,130...42,681,161
Ensembl chr 6:42,613,546...42,681,015
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EMC6
ER membrane protein complex subunit 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:47,497,354...47,498,861
Ensembl chr 9:47,497,719...47,498,048
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EPM2A
EPM2A glucan phosphatase, laforin
acts_upstream_of_or_within
ISO
(PMID:24430976)
MGI
PMID:24430976
NCBI chr 1:36,835,775...36,977,653
Ensembl chr 1:36,870,594...36,931,847
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IFGGB2
interferon-inducible GTPase 1-like
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr11:857,713...873,282
Ensembl chr11:859,108...864,008
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LOC119877912
beclin-1
involved_in
IEA
UniProt Ensembl
GO_REF:0000104 GO_REF:0000107
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LOC481473
immunity-related GTPase family M protein
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617
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LOC606863
immunity-related GTPase family M protein-like
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829
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MAP1LC3A
microtubule associated protein 1 light chain 3 alpha
involved_in
ISO
PMID:11060023 (PMID:24290141)
UniProt
PMID:11060023 PMID:24290141
RGD:8554284
NCBI chr24:23,672,343...23,673,937
Ensembl chr24:23,633,579...23,673,921
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MAP1LC3B
microtubule associated protein 1 light chain 3 beta
involved_in
ISO
(PMID:37943659)
UniProt
PMID:37943659
NCBI chr 5:65,669,553...65,683,445
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MTM1
myotubularin 1
involved_in acts_upstream_of
IEA ISO
(PMID:23695157)
Ensembl MGI
PMID:23695157
GO_REF:0000107
NCBI chr X:118,820,644...118,917,166
Ensembl chr X:118,820,494...118,916,368
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PACS2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chr 8:72,672,861...72,721,655
Ensembl chr 8:72,673,472...72,721,215
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PIK3C3
phosphatidylinositol 3-kinase catalytic subunit type 3
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:24098492)
RGD Ensembl MGI
PMID:12453151 PMID:24098492
GO_REF:0000107 RGD:2303129
NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437
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PSEN1
presenilin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15452145)
Ensembl MGI
PMID:15452145
GO_REF:0000107
NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
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RAB1A
RAB1A, member RAS oncogene family
involved_in
ISS IBA IEA
UniProt GO_Central Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:64,564,351...64,590,654
Ensembl chr10:64,564,298...64,590,705
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RAB23
RAB23, member RAS oncogene family
involved_in
ISO
(PMID:22452336)
UniProt
PMID:22452336
NCBI chr12:24,388,530...24,438,956
Ensembl chr12:24,387,643...24,421,869
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RAB33B
RAB33B, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:3,256,790...3,273,198
Ensembl chr19:3,259,119...3,274,153
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RAB7A
RAB7A, member RAS oncogene family
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:2,704,716...2,776,518
Ensembl chr20:2,704,752...2,826,636
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RB1CC1
RB1 inducible coiled-coil 1
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr29:4,445,668...4,544,223
Ensembl chr29:4,375,785...4,517,168
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RUFY4
RUN and FYVE domain containing 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr37:24,809,365...24,830,254
Ensembl chr37:24,809,359...24,829,724
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STING1
stimulator of interferon response cGAMP interactor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:34,783,947...34,792,204
Ensembl chr 2:34,784,232...34,789,072
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STX12
syntaxin 12
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:72,546,178...72,582,706
Ensembl chr 2:72,547,608...72,582,660
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SYNPO2
synaptopodin 2
involved_in
ISO
PMID:23434281
UniProt
PMID:23434281
RGD:12793031
NCBI chr32:37,844,844...38,026,755
Ensembl chr32:37,812,903...38,024,489
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TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23908015)
Ensembl MGI
PMID:23908015
GO_REF:0000107
NCBI chr18:49,784,480...49,794,361
Ensembl chr18:49,784,490...49,794,317
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TMEM41B
transmembrane protein 41B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr21:32,598,075...32,632,614
Ensembl chr21:32,599,425...32,621,761
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TP53INP2
tumor protein p53 inducible nuclear protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr24:23,768,208...23,801,268
Ensembl chr24:23,792,687...23,799,331
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TRAF6
TNF receptor associated factor 6
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641
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TRIM32
tripartite motif containing 32
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974
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UBQLN1
ubiquilin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:75,767,345...75,812,278
Ensembl chr 1:75,767,188...75,838,051
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ULK1
unc-51 like autophagy activating kinase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
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VMP1
vacuole membrane protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:34,197,045...34,340,401
Ensembl chr 9:34,197,133...34,339,597
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WDR45
WD repeat domain 45
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:42,221,261...42,237,535
Ensembl chr X:42,218,046...42,226,422
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WDR45B
WD repeat domain 45B
involved_in
IEA
Ensembl
GO_REF:0000107
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WIPI1
WD repeat domain, phosphoinositide interacting 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147
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WIPI2
WD repeat domain, phosphoinositide interacting 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:12,656,469...12,698,623
Ensembl chr 6:12,658,239...12,698,734
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SMURF1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:10,385,781...10,498,071
Ensembl chr 6:10,385,779...10,494,922
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BECN1
beclin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27994061)
Ensembl MGI
PMID:27994061
GO_REF:0000107
NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
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EHMT2
euchromatic histone lysine methyltransferase 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23918802)
Ensembl MGI
PMID:23918802
GO_REF:0000107
NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584
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FEZ1
fasciculation and elongation protein zeta 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:9,001,927...9,044,330
Ensembl chr 5:9,001,989...9,044,332
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FEZ2
fasciculation and elongation protein zeta 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:29,043,449...29,086,104
Ensembl chr17:29,044,355...29,086,100
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LOC119877912
beclin-1
involved_in
IEA
Ensembl
GO_REF:0000107
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LRRK2
leucine rich repeat kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
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MTM1
myotubularin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23695157)
Ensembl MGI
PMID:23695157
GO_REF:0000107
NCBI chr X:118,820,644...118,917,166
Ensembl chr X:118,820,494...118,916,368
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NUPR1
nuclear protein 1, transcriptional regulator
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:18,222,367...18,224,015
Ensembl chr 6:18,222,515...18,224,014
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PHF23
PHD finger protein 23
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:32,202,636...32,207,738
Ensembl chr 5:32,202,825...32,207,000
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PINK1
PTEN induced kinase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
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SCFD1
sec1 family domain containing 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:9,970,724...10,077,123
Ensembl chr 8:9,970,790...10,077,122
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SEC22B
SEC22 homolog B, vesicle trafficking protein
involved_in
ISO
(PMID:21242315)
UniProt
PMID:21242315
NCBI chr17:57,094,038...57,115,891
Ensembl chr17:57,053,218...57,115,886
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SMCR8
SMCR8-C9orf72 complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
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TMEM39A
transmembrane protein 39A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr33:23,083,979...23,121,269
Ensembl chr33:23,084,919...23,116,210
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ATG2A
autophagy related 2A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:52,258,070...52,277,953
Ensembl chr18:52,258,187...52,277,965
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ATG7
autophagy related 7
ISO
RGD
PMID:33372336
RGD:407571673
NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
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BECN1
beclin 1
ISO
RGD
PMID:25561470
RGD:11561937
NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
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ELAPOR1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:42,612,130...42,681,161
Ensembl chr 6:42,613,546...42,681,015
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LRSAM1
leucine rich repeat and sterile alpha motif containing 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:55,855,576...55,894,915
Ensembl chr 9:55,856,091...55,894,488
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MOAP1
modulator of apoptosis 1
involved_in
ISO
(PMID:33783314)
UniProt
PMID:33783314
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PIP4K2A
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:10,464,019...10,642,365
Ensembl chr 2:10,463,010...10,640,327
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PIP4K2B
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:23,445,350...23,473,195
Ensembl chr 9:23,445,482...23,470,184
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PIP4K2C
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:1,670,076...1,680,975
Ensembl chr10:1,672,380...1,680,840
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RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501
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RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr38:14,927,670...15,025,554
Ensembl chr38:14,928,628...15,025,865
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RALB
RAS like proto-oncogene B
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:29,820,006...29,868,345
Ensembl chr19:29,768,359...29,868,335
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SH3GLB1
SH3 domain containing GRB2 like, endophilin B1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:61,439,414...61,471,414
Ensembl chr 6:61,439,415...61,462,087
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SNX18
sorting nexin 18
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:60,803,245...60,945,317
Ensembl chr 4:60,835,783...60,945,828
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SNX30
sorting nexin family member 30
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:67,233,469...67,294,159
Ensembl chr11:67,233,256...67,289,224
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SNX4
sorting nexin 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr33:28,413,586...28,468,546
Ensembl chr33:28,419,128...28,469,488
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SNX7
sorting nexin 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:51,004,307...51,388,283
Ensembl chr 6:51,025,203...51,094,539
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TRIM32
tripartite motif containing 32
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974
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ULK1
unc-51 like autophagy activating kinase 1
ISO
RGD
PMID:23448468
RGD:13208863
NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
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WDR45
WD repeat domain 45
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:42,221,261...42,237,535
Ensembl chr X:42,218,046...42,226,422
G
WIPI1
WD repeat domain, phosphoinositide interacting 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147
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ATG16L1
autophagy related 16 like 1
acts_upstream_of_or_within
ISO
(PMID:24954904)
MGI
PMID:24954904
NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672
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ATG5
autophagy related 5
acts_upstream_of_or_within
ISO
(PMID:23918802)
MGI
PMID:23918802
NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
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LOC481473
immunity-related GTPase family M protein
involved_in
ISO
(PMID:28389568)
UniProt
PMID:28389568
NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617
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WIPI2
WD repeat domain, phosphoinositide interacting 2
acts_upstream_of_or_within
ISO
(PMID:24954904)
MGI
PMID:24954904
NCBI chr 6:12,656,469...12,698,623
Ensembl chr 6:12,658,239...12,698,734
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ARFIP2
ADP ribosylation factor interacting protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr21:29,793,325...29,798,223
Ensembl chr21:29,791,813...29,798,172
G
ATG16L1
autophagy related 16 like 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24954904)
Ensembl MGI
PMID:24954904
GO_REF:0000107
NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672
G
ATG4B
autophagy related 4B cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr25:51,494,316...51,518,683
Ensembl chr25:51,504,537...51,517,659
G
ATG4D
autophagy related 4D cysteine peptidase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:50,618,458...50,623,703
Ensembl chr20:50,618,459...50,624,179
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LRBA
LPS responsive beige-like anchor protein
involved_in
ISO
(PMID:33773106)
UniProt
PMID:33773106
NCBI chr15:48,273,866...48,996,546
Ensembl chr15:48,274,881...48,995,697
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MFN2
mitofusin 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
G
PACS2
phosphofurin acidic cluster sorting protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chr 8:72,672,861...72,721,655
Ensembl chr 8:72,673,472...72,721,215
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PIK3C3
phosphatidylinositol 3-kinase catalytic subunit type 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24098492)
MGI Ensembl
PMID:24098492
GO_REF:0000107
NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437
G
STX17
syntaxin 17
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:23455425)
MGI Ensembl
PMID:23455425
GO_REF:0000107
NCBI chr11:56,885,874...56,951,714
Ensembl chr11:56,885,174...56,945,767
G
WIPI2
WD repeat domain, phosphoinositide interacting 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24954904)
Ensembl MGI
PMID:24954904
GO_REF:0000107
NCBI chr 6:12,656,469...12,698,623
Ensembl chr 6:12,658,239...12,698,734
G
C9orf72
C9orf72-SMCR8 complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:45,664,942...45,688,777
Ensembl chr11:45,666,293...45,688,780
G
CHEK2
checkpoint kinase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:22,052,256...22,145,675
Ensembl chr26:21,427,961...22,240,624
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EFNB1
ephrin B1
acts_upstream_of_positive_effect
ISO
(PMID:33280498)
UniProt
PMID:33280498
NCBI chr X:53,292,407...53,303,824
Ensembl chr X:53,292,565...53,304,600
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EPHB2
EPH receptor B2
involved_in acts_upstream_of_positive_effect
IEA ISO
(PMID:33280498)
Ensembl UniProt
PMID:33280498
GO_REF:0000107
NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
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IFT20
intraflagellar transport 20
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804
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IFT88
intraflagellar transport 88
involved_in
ISO
(PMID:24089209)
UniProt
PMID:24089209
NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
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MTMR3
myotubularin related protein 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:23,047,500...23,187,694
Ensembl chr26:23,047,345...23,186,262
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MTOR
mechanistic target of rapamycin kinase
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
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PIKFYVE
phosphoinositide kinase, FYVE-type zinc finger containing
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr37:16,537,095...16,620,427
Ensembl chr37:16,541,562...16,619,554
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RAB1B
RAB1B, member RAS oncogene family
involved_in
ISO
(PMID:20545908)
UniProt
PMID:20545908
NCBI chr18:51,026,975...51,034,356
Ensembl chr18:51,028,013...51,034,473
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RNF186
ring finger protein 186
involved_in acts_upstream_of_positive_effect
IEA ISO
(PMID:33280498)
Ensembl UniProt
PMID:33280498
GO_REF:0000107
NCBI chr 2:78,915,131...78,916,909
Ensembl chr 2:78,915,339...78,916,037
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RNF5
ring finger protein 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23093945)
Ensembl MGI
PMID:23093945
GO_REF:0000107
NCBI chr12:1,571,277...1,575,151
Ensembl chr12:1,571,420...1,573,506
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TBC1D14
TBC1 domain family member 14
involved_in
ISO
(PMID:22613832)
BHF-UCL
PMID:22613832
NCBI chr 3:58,992,743...59,097,581
Ensembl chr 3:58,926,237...59,097,621
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UBQLN2
ubiquilin 2
involved_in
ISO
(PMID:20529957)
UniProt
PMID:20529957
NCBI chr X:47,860,923...47,864,282
G
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:10,385,781...10,498,071
Ensembl chr 6:10,385,779...10,494,922
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STBD1
starch binding domain 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr32:932,245...953,070
Ensembl chr32:951,698...952,897
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TOM1
target of myb1 membrane trafficking protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:28,782,910...28,822,634
Ensembl chr10:28,775,300...28,822,570
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