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ONTOLOGY REPORT - ANNOTATIONS


Term:single-stranded DNA endodeoxyribonuclease activity
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Accession:GO:0000014 term browser browse the term
Definition:Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks.
Synonyms:related_synonym: single-stranded DNA specific endodeoxyribonuclease activity;   ssDNA-specific endodeoxyribonuclease activity


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single-stranded DNA endodeoxyribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC117889.1 RGD:13792537
G Dclre1c DNA cross-link repair 1C JBrowse link 17 78,782,512 78,812,140 RGD:1624291
G Endog endonuclease G JBrowse link 3 8,741,833 8,744,414 RGD:13792537
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:1624291
RGD:13792537
G Exog exo/endonuclease G JBrowse link 8 128,133,398 128,153,110 RGD:13792537
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:1624291
RGD:13792537
RGD:1600115
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:633791
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:1624291
RGD:13792537
RGD:1600115
G Rbbp8 RB binding protein 8, endonuclease JBrowse link 18 3,134,630 3,227,702 RGD:1624291
RGD:13792537
G Setmar SET domain and mariner transposase fusion gene JBrowse link 4 140,092,346 140,104,495 RGD:1624291
3' overhang single-stranded DNA endodeoxyribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:1624291
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link 10 2,010,140 2,037,953 RGD:1624291
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:1624291
G Xrcc4 X-ray repair cross complementing 4 JBrowse link 2 18,674,496 18,927,463 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19619
    catalytic activity 6006
      catalytic activity, acting on DNA 203
        deoxyribonuclease activity 63
          endodeoxyribonuclease activity 44
            single-stranded DNA endodeoxyribonuclease activity 13
              3' overhang single-stranded DNA endodeoxyribonuclease activity 4
              5' overhang single-stranded DNA endodeoxyribonuclease activity 0
Path 2
Term Annotations click to browse term
  molecular_function 19619
    catalytic activity 6006
      hydrolase activity 2595
        hydrolase activity, acting on ester bonds 782
          nuclease activity 212
            endonuclease activity 121
              endodeoxyribonuclease activity 44
                single-stranded DNA endodeoxyribonuclease activity 13
                  3' overhang single-stranded DNA endodeoxyribonuclease activity 4
                  5' overhang single-stranded DNA endodeoxyribonuclease activity 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.