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ONTOLOGY REPORT - ANNOTATIONS


Term:mitochondrial genome maintenance
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Accession:GO:0000002 term browser browse the term
Definition:The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome.


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mitochondrial genome maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt3 AKT serine/threonine kinase 3 involved_in ISO
IEA
(PMID:18524868)
GO_REF:0000107
RGD
Ensembl
PMID:18524868 GO_REF:0000107 NCBI chr13:95,076,308...95,348,913
Ensembl chr13:95,081,390...95,348,913
JBrowse link
G Mef2a myocyte enhancer factor 2a involved_in IEA
ISO
GO_REF:0000107
(MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107 MGI:2429350 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in ISO (PMID:23313956) RGD PMID:23313956 NCBI chr 3:138,397,925...138,406,672
Ensembl chr 3:138,398,011...138,406,666
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO
IEA
(PMID:16582910)
GO_REF:0000107
RGD
Ensembl
PMID:16582910 GO_REF:0000107 NCBI chr 6:26,585,713...26,600,265
Ensembl chr 6:26,587,443...26,599,511
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase involved_in ISS
ISO
GO_REF:0000024
(PMID:18158317)
UniProt
RGD
PMID:18158317 GO_REF:0000024 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Slc25a33 solute carrier family 25 member 33 involved_in ISO (PMID:25320081) RGD PMID:25320081 NCBI chr 5:166,701,463...166,726,794
Ensembl chr 5:166,701,465...166,726,794
JBrowse link
G Slc25a36 solute carrier family 25 member 36 involved_in ISO (PMID:25320081) RGD PMID:25320081 NCBI chr 8:104,962,569...104,995,935
Ensembl chr 8:104,966,124...104,995,725
JBrowse link
G Tymp thymidine phosphorylase involved_in ISO (PMID:9924029) RGD PMID:9924029 NCBI chr 7:130,342,481...130,347,845
Ensembl chr 7:130,342,483...130,347,587
JBrowse link
mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H acts_upstream_of_or_within ISO (MGI:6304909|PMID:30705315) RGD PMID:30705315 MGI:6304909 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within ISO MGI:5470227 (MGI:5465384|PMID:23197651) RGD PMID:23197651 MGI:5465384 NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:3587950 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Tk2 thymidine kinase 2 acts_upstream_of_or_within ISO MGI:3808750 (MGI:3807446|PMID:18467430) RGD PMID:18467430 MGI:3807446 NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221
JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO (PMID:29290614) RGD PMID:29290614 NCBI chr10:46,980,646...47,018,728
Ensembl chr10:46,981,958...47,018,537
JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (MGI:5516376|PMID:24101517) RGD PMID:24101517 MGI:5516376 NCBI chr 4:123,108,924...123,118,186
Ensembl chr 4:123,108,925...123,118,186
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO
IEA
(PMID:19487465)
GO_REF:0000107
RGD
Ensembl
PMID:19487465 GO_REF:0000107
G Lig3 DNA ligase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4943977|PMID:21390132), (MGI:4943978|PMID:21390131)
(PMID:21390132)
RGD PMID:21390131 PMID:21390132, PMID:21873635 MGI:4943977 MGI:4943978, RGD:13792537 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (MGI:6393030|PMID:29073063) RGD PMID:29073063 MGI:6393030 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:3528279 (MGI:5516376|PMID:24101517) RGD PMID:24101517 MGI:5516376 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO
IEA
ISS
(PMID:26760297)
GO_REF:0000107
(MGI:5776643|PMID:26760297)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26760297 GO_REF:0000024 GO_REF:0000107 MGI:5776643 NCBI chr 6:26,585,713...26,600,265
Ensembl chr 6:26,587,443...26,599,511
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:24738702) RGD PMID:24738702 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 19491
    cellular process 18343
      cellular component organization or biogenesis 6721
        cellular component organization 6481
          organelle organization 4060
            mitochondrion organization 547
              mitochondrial genome maintenance 24
                mitochondrial DNA metabolic process + 16
paths to the root