Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:sperm midpiece
go back to main search page
Accession:GO:0097225 term browser browse the term
Definition:The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
sperm midpiece term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme ISO RGD PMID:12444051 RGD:1298874 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521 		JBrowse link
G Adcy3 adenylate cyclase 3 ISO MMO:0000538 RGD PMID:32603211 RGD:407550220 NCBI chrNW_004624738:7,163,189...7,249,249
Ensembl chrNW_004624738:7,163,354...7,249,190 		JBrowse link
G Adgb androglobin located_in ISO (PMID:35700329) UniProt PMID:35700329 NCBI chrNW_004624785:11,338,341...11,470,748
Ensembl chrNW_004624785:11,338,069...11,470,955 		JBrowse link
G Akap3 A-kinase anchoring protein 3 located_in ISO (PMID:30745215) UniProt PMID:30745215 NCBI chrNW_004624860:1,684,474...1,701,307
Ensembl chrNW_004624860:1,684,433...1,701,736 		JBrowse link
G Akap4 A-kinase anchoring protein 4 located_in ISO (PMID:30745215) UniProt PMID:30745215 NCBI chrNW_004624893:1,759,148...1,767,831
Ensembl chrNW_004624893:1,759,045...1,767,918 		JBrowse link
G Atg16l1 autophagy related 16 like 1 located_in ISO (PMID:33087875) UniProt PMID:33087875 NCBI chrNW_004624843:5,797,725...5,838,768
Ensembl chrNW_004624843:5,805,069...5,838,741 		JBrowse link
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO (PMID:16861705) ARUK-UCL PMID:16861705 NCBI chrNW_004624794:1,068,056...1,108,303 JBrowse link
G Calm1 calmodulin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Ccdc172 coiled-coil domain containing 172 located_in ISO PMID:24394471 UniProt PMID:24394471 RGD:12903238 NCBI chrNW_004624737:30,200,723...30,274,559
Ensembl chrNW_004624737:30,200,650...30,274,521 		JBrowse link
G Ccdc34 coiled-coil domain containing 34 located_in ISO (PMID:34348960) UniProt PMID:34348960 NCBI chrNW_004624766:17,047,144...17,106,729
Ensembl chrNW_004624766:17,094,157...17,106,683 		JBrowse link
G Ccr6 C-C motif chemokine receptor 6 located_in ISO (PMID:23765988) UniProt PMID:23765988 NCBI chrNW_004624785:12,190,802...12,203,924 JBrowse link
G Cd55 CD55 molecule (Cromer blood group) located_in ISO (PMID:24377861) AgBase PMID:24377861 NCBI chrNW_004624807:4,252,676...4,274,828 JBrowse link
G Cfap52 cilia and flagella associated protein 52 is_active_in
located_in		 ISO
IEA		 (PMID:37236356) MGI
Ensembl		 PMID:37236356 GO_REF:0000107 NCBI chrNW_004624786:11,992,545...12,050,112
Ensembl chrNW_004624786:11,992,553...12,050,220 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624831:3,418,104...3,509,769
Ensembl chrNW_004624831:3,418,036...3,508,971 		JBrowse link
G Cfap65 cilia and flagella associated protein 65 located_in ISO (PMID:31413122), (PMID:33472045) UniProt PMID:31413122 PMID:33472045 NCBI chrNW_004624823:5,977,592...6,015,786
Ensembl chrNW_004624823:5,977,554...6,015,868 		JBrowse link
G Cfap69 cilia and flagella associated protein 69 located_in ISO (PMID:29606301), (PMID:30415212) MGI PMID:29606301 PMID:30415212 NCBI chrNW_004624809:2,916,614...2,947,817
Ensembl chrNW_004624809:2,917,122...2,981,123 		JBrowse link
G Defb1 defensin beta 1 located_in ISO (PMID:25122636) UniProt PMID:25122636 NCBI chrNW_004624861:4,710,687...4,718,867 JBrowse link
G Gabarap GABA type A receptor-associated protein located_in ISO (PMID:22033522) MGI PMID:22033522 NCBI chrNW_004624786:9,857,370...9,859,675
Ensembl chrNW_004624786:9,857,370...9,860,063 		JBrowse link
G Garin2 golgi associated RAB2 interactor family member 2 located_in ISO (PMID:29025071) UniProt PMID:29025071 NCBI chrNW_004624734:33,780,215...33,846,638
Ensembl chrNW_004624734:33,804,462...33,834,540 		JBrowse link
G Gk2 glycerol kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:11,726,648...11,728,674 JBrowse link
G Gnal G protein subunit alpha L ISO MMO:0000538 RGD PMID:32603211 RGD:407550220 NCBI chrNW_004624770:19,433,614...19,504,759
Ensembl chrNW_004624770:19,433,660...19,504,698 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO sperm cell midpiece RGD PMID:8529092 RGD:5685625 NCBI chrNW_004624747:1,567,540...1,758,251
Ensembl chrNW_004624747:1,576,681...1,758,201 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 located_in ISO (PMID:32791035) GO_Central PMID:32791035 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Hyal3 hyaluronidase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:4,154,862...4,160,635
Ensembl chrNW_004624730:4,151,688...4,160,614 		JBrowse link
G Ift172 intraflagellar transport 172 located_in ISO (PMID:23055941), (PMID:24339785) MGI PMID:23055941 PMID:24339785 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933 		JBrowse link
G Ift27 intraflagellar transport 27 located_in ISO (PMID:23055941) MGI PMID:23055941 NCBI chrNW_004624752:11,005,101...11,020,493
Ensembl chrNW_004624752:11,004,841...11,021,250 		JBrowse link
G Ift81 intraflagellar transport 81 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:21,624,322...21,698,195
Ensembl chrNW_004624747:21,624,862...21,698,202 		JBrowse link
G Il4i1 interleukin 4 induced 1 located_in ISO (PMID:25767141) UniProt PMID:25767141 NCBI chrNW_004624832:4,404,818...4,444,551
Ensembl chrNW_004624832:4,431,903...4,444,651 		JBrowse link
G Lyzl6 lysozyme like 6 located_in ISO (PMID:24013621) UniProt PMID:24013621 NCBI chrNW_004624786:5,758,321...5,762,276
Ensembl chrNW_004624786:5,758,451...5,760,610 		JBrowse link
G Mroh2b maestro heat like repeat family member 2B located_in ISO (PMID:27105888) UniProt PMID:27105888 NCBI chrNW_004624759:13,906,288...13,981,645
Ensembl chrNW_004624759:13,924,050...13,981,645 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624801:4,612,890...4,630,454
Ensembl chrNW_004624801:4,612,849...4,630,451 		JBrowse link
G Nme8 NME/NM23 family member 8 located_in ISO (PMID:11737268) ARUK-UCL PMID:11737268 NCBI chrNW_004624740:23,351,832...23,396,905
Ensembl chrNW_004624740:23,349,858...23,396,888 		JBrowse link
G Odf2 outer dense fiber of sperm tails 2 located_in ISO (PMID:38038747) UniProt PMID:38038747 NCBI chrNW_004624760:6,430,584...6,462,584
Ensembl chrNW_004624760:6,430,604...6,462,671 		JBrowse link
G Omp olfactory marker protein ISO MMO:0000538 RGD PMID:32603211 RGD:407550220 NCBI chrNW_004624863:179,301...189,441 JBrowse link
G Pacrg parkin coregulated located_in ISO (PMID:15148410) MGI PMID:15148410 NCBI chrNW_004624855:99,475...430,105 JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma located_in ISO (PMID:34446558) UniProt PMID:34446558 NCBI chrNW_004624758:17,969,777...18,048,476
Ensembl chrNW_004624758:17,969,705...18,049,904 		JBrowse link
G Ppp3r2 protein phosphatase 3 regulatory subunit B, beta located_in ISO (PMID:34446558) UniProt PMID:34446558 NCBI chrNW_004624758:9,737,002...9,737,978
Ensembl chrNW_004624758:9,736,936...9,739,266 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha located_in ISO (PMID:10906071) UniProt PMID:10906071 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744 		JBrowse link
G Rabl2b RAB, member of RAS oncogene family like 2B located_in ISO (PMID:23055941) MGI PMID:23055941 NCBI chrNW_004624752:12,782...33,152 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938 		JBrowse link
G Rho rhodopsin located_in ISO (PMID:31924821) MGI PMID:31924821 NCBI chrNW_004624872:523,892...528,278
Ensembl chrNW_004624872:523,912...527,615 		JBrowse link
G Slc26a3 solute carrier family 26 member 3 located_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624739:21,979,164...22,004,794
Ensembl chrNW_004624739:21,979,172...22,004,716 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 located_in ISO (PMID:21976599) UniProt PMID:21976599 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203 		JBrowse link
G Spata19 spermatogenesis associated 19 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:8,430,604...8,435,215
Ensembl chrNW_004624812:8,430,242...8,435,112 		JBrowse link
G Spata33 spermatogenesis associated 33 located_in ISO (PMID:33087875), (PMID:34446558) UniProt PMID:33087875 PMID:34446558 NCBI chrNW_004624746:294,427...302,393
Ensembl chrNW_004624746:294,432...302,349 		JBrowse link
G Spef2 sperm flagellar 2 located_in ISO (PMID:19889948) MGI PMID:19889948 NCBI chrNW_004624759:19,135,629...19,298,966 JBrowse link
G Spmip6 sperm microtubule inner protein 6 located_in ISO (PMID:31504408) UniProt PMID:31504408 NCBI chrNW_004624736:38,784,071...38,800,097
Ensembl chrNW_004624736:38,784,128...38,799,912 		JBrowse link
G Sqstm1 sequestosome 1 located_in ISO (PMID:22033522) MGI PMID:22033522 NCBI chrNW_004624733:42,689,454...42,700,916
Ensembl chrNW_004624733:42,691,841...42,700,916 		JBrowse link
G Tacr1 tachykinin receptor 1 located_in ISO (PMID:17437961) UniProt PMID:17437961 NCBI chrNW_004624749:28,243,667...28,455,012
Ensembl chrNW_004624749:28,243,640...28,455,086 		JBrowse link
G Tacr2 tachykinin receptor 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:3,658,128...3,670,432
Ensembl chrNW_004624754:3,656,319...3,670,432 		JBrowse link
G Tacr3 tachykinin receptor 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624830:4,635,987...4,704,251 JBrowse link
G Tbc1d21 TBC1 domain family member 21 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:558,478...567,407
Ensembl chrNW_004624781:558,560...567,249 		JBrowse link
G Tcp11 t-complex 11 located_in ISO (PMID:27105888) UniProt PMID:27105888 NCBI chrNW_004624754:22,258,418...22,284,562
Ensembl chrNW_004624754:22,264,830...22,282,795 		JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 located_in ISO (PMID:32976492) UniProt PMID:32976492 NCBI chrNW_004624775:15,331,214...15,355,206
Ensembl chrNW_004624775:15,331,047...15,355,206 		JBrowse link
G Vdac2 voltage dependent anion channel 2 located_in ISO (PMID:33087875) UniProt PMID:33087875 NCBI chrNW_004624754:8,587,698...8,601,757
Ensembl chrNW_004624754:8,587,920...8,602,761 		JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A located_in ISO (PMID:29928881) MGI PMID:29928881 NCBI chrNW_004624811:4,639,926...4,902,749
Ensembl chrNW_004624811:4,640,090...4,901,510 		JBrowse link
sperm mitochondrial sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 located_in ISO (PMID:16790685) MGI PMID:16790685 NCBI chrNW_004624764:16,089,357...16,113,275 JBrowse link
G Gk2 glycerol kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:11,726,648...11,728,674 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:24478030 RGD:10445831 NCBI chrNW_004624734:2,233,932...2,239,687
Ensembl chrNW_004624734:2,233,547...2,241,436 		JBrowse link
G Irgc immunity related GTPase cinema located_in ISO (PMID:37195149) UniProt PMID:37195149 NCBI chrNW_004624907:1,229,630...1,231,778
Ensembl chrNW_004624907:1,229,663...1,231,450 		JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma located_in ISO (PMID:34446558) MGI PMID:34446558 NCBI chrNW_004624758:17,969,777...18,048,476
Ensembl chrNW_004624758:17,969,705...18,049,904 		JBrowse link
G Ppp3r2 protein phosphatase 3 regulatory subunit B, beta located_in ISO (PMID:34446558) MGI PMID:34446558 NCBI chrNW_004624758:9,737,002...9,737,978
Ensembl chrNW_004624758:9,736,936...9,739,266 		JBrowse link
G Spata33 spermatogenesis associated 33 located_in ISO (PMID:33087875), (PMID:34446558) UniProt PMID:33087875 PMID:34446558 NCBI chrNW_004624746:294,427...302,393
Ensembl chrNW_004624746:294,432...302,349 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15721
    cellular anatomical structure 15626
      sperm midpiece 61
        sperm mitochondrial sheath 7
Path 2
Term Annotations click to browse term
  cellular_component 15721
    cellular anatomical structure 15626
      organelle 11394
        membrane-bounded organelle 10400
          cilium 734
            motile cilium 301
              9+2 motile cilium 237
                sperm flagellum 224
                  sperm midpiece 61
                    sperm mitochondrial sheath 7
paths to the root