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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
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Accession:GO:0060213 term browser browse the term
Definition:Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.
Synonyms:related_synonym: positive regulation of 3' to 5' mRNA deadenylation;   positive regulation of mRNA deadenylation;   positive regulation of nuclear mRNA poly(A) tail shortening

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positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955461:14,194,268...14,260,949
Ensembl chrNW_004955461:14,205,748...14,253,861 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:18337750) MGI PMID:18337750 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778 		JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:23644599)
(PMID:21278420)		 BHF-UCL
UniProt		 PMID:21278420 PMID:23644599 NCBI chrNW_004955433:15,938,791...16,027,547
Ensembl chrNW_004955433:15,938,791...16,027,545 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:19716330)
(PMID:21278420)		 UniProt PMID:19716330 PMID:21278420 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955425:1,032,446...1,224,300
Ensembl chrNW_004955425:1,057,575...1,224,300 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004955455:5,612,087...5,660,543
Ensembl chrNW_004955455:5,611,093...5,660,104 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004955413:25,820,428...26,060,681
Ensembl chrNW_004955413:25,886,077...26,048,546 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chrNW_004955506:4,440,555...4,579,642
Ensembl chrNW_004955506:4,440,555...4,559,070 		JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004955451:10,950,270...10,963,183 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:21278420)
(PMID:10330172)
(PMID:20595389)		 UniProt PMID:10330172 PMID:20595389 PMID:21278420 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12600
    cellular process 12034
      metabolic process 7955
        catabolic process 1985
          positive regulation of catabolic process 495
            positive regulation of mRNA catabolic process 83
              positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 11
Path 2
Term Annotations click to browse term
  biological_process 12600
    biological regulation 9088
      regulation of biological process 8781
        regulation of cellular process 8493
          regulation of metabolic process 5013
            regulation of biosynthetic process 3907
              regulation of macromolecule biosynthetic process 3718
                regulation of gene expression 3611
                  negative regulation of gene expression 976
                    mRNA catabolic process 201
                      regulation of mRNA catabolic process 155
                        regulation of mRNA stability 140
                          mRNA destabilization 78
                            nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 36
                              nuclear-transcribed mRNA poly(A) tail shortening 17
                                regulation of nuclear-transcribed mRNA poly(A) tail shortening 13
                                  positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 11
paths to the root