Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:digestion
go back to main search page
Accession:GO:0007586 term browser browse the term
Definition:The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
Synonyms:xref: Wikipedia:Digestion


show annotations for term's descendants           Sort by:
digestion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1810009J06Rikl RIKEN cDNA 1810009J06 gene like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:69,815,107...69,826,206
Ensembl chr 4:69,815,108...69,818,851 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO (PMID:8486699) RGD PMID:8486699 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 involved_in ISO (PMID:8573067) RGD PMID:8573067 NCBI chr17:65,759,778...65,808,013
Ensembl chr17:65,759,788...65,775,764 		JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IEA		 (PMID:7508385)
GO_REF:0000107		 RGD
Ensembl		 PMID:7508385 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372 		JBrowse link
G Cck cholecystokinin involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:121,153,499...121,160,194
Ensembl chr 8:121,153,500...121,160,084 		JBrowse link
G Clps colipase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:6,620,529...6,622,709
Ensembl chr20:6,620,529...6,622,689 		JBrowse link
G Clpsl2 colipase-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:6,608,128...6,610,951
Ensembl chr20:6,608,128...6,610,951 		JBrowse link
G Ctrb1 chymotrypsinogen B1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:39,652,931...39,657,689
Ensembl chr19:39,652,933...39,657,688 		JBrowse link
G Dao D-amino-acid oxidase involved_in ISS
ISO		 GO_REF:0000024
(PMID:6147398)		 UniProt
RGD		 PMID:6147398 GO_REF:0000024 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Lrcol1 leucine rich colipase-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:46,326,049...46,339,475
Ensembl chr12:46,326,077...46,337,953 		JBrowse link
G Pgc progastricsin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:13,257,462...13,265,682
Ensembl chr 9:13,257,462...13,265,682 		JBrowse link
G Prss1 serine protease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:70,364,586...70,367,792 		JBrowse link
G Prss2 protease, serine, 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:70,278,304...70,283,385
Ensembl chr 4:70,278,304...70,283,385 		JBrowse link
G Prss3b protease, serine, 3B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:69,871,810...69,875,518
Ensembl chr 4:69,871,797...69,875,549 		JBrowse link
G Prss3bl1 protease, serine, 3B like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:69,797,661...69,803,606
Ensembl chr 4:69,797,661...69,803,606 		JBrowse link
G Ucn2 urocortin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172 		JBrowse link
G Ucn3 urocortin 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:66,309,748...66,315,996
Ensembl chr17:66,309,371...66,315,990 		JBrowse link
defecation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2451080 (PMID:25147230)		 Ensembl
RGD		 PMID:25147230 GO_REF:0000107 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Mdk midkine involved_in IEA
ISO		 GO_REF:0000107
(PMID:10096022)		 Ensembl
RGD		 PMID:10096022 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
digestive system process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 acts_upstream_of_or_within ISO MGI:2680653 (PMID:23975432) RGD PMID:23975432 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp4a ATPase H+/K+ transporting subunit alpha TAS RGD PMID:3023364 RGD:631722 NCBI chr 1:85,961,607...85,974,972
Ensembl chr 1:85,961,708...85,974,844 		JBrowse link
G Cartpt CART prepropeptide TAS RGD PMID:10919272 RGD:1302914 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Cckar cholecystokinin A receptor IDA RGD PMID:9773935 RGD:2313338 NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747 		JBrowse link
G Cckbr cholecystokinin B receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108482|MGI:2384535 (PMID:15476751)		 Ensembl
RGD		 PMID:15476751 GO_REF:0000107 NCBI chr 1:159,771,733...159,781,738
Ensembl chr 1:159,771,733...159,814,881 		JBrowse link
G Chrm5 cholinergic receptor, muscarinic 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:99,284,846...99,337,252
Ensembl chr 3:99,284,846...99,337,252 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IDA
IBA		 PMID:17705669
GO_REF:0000033		 GO_Central PMID:17705669 GO_REF:0000033, RGD:8553549 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of ISO MGI:3723512 (PMID:17030183) RGD PMID:17030183 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267 		JBrowse link
G Hrh2 histamine receptor H 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:99479 (PMID:15476751)		 InterPro
RGD		 PMID:15476751 GO_REF:0000002 NCBI chr17:10,366,004...10,407,791
Ensembl chr17:10,368,298...10,407,631 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO MGI:2389447|MGI:2680653 (PMID:15385447), (PMID:16314573), (PMID:19491250) RGD PMID:15385447 PMID:16314573 PMID:19491250 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Nmu neuromedin U IMP RGD PMID:12584108 RGD:1642125 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
G Slc26a7 solute carrier family 26 member 7 involved_in ISO (PMID:12736153) RGD PMID:12736153 NCBI chr 5:27,884,400...28,021,865
Ensembl chr 5:27,887,042...28,021,658 		JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3579458 (PMID:15684419)		 Ensembl
RGD		 PMID:15684419 GO_REF:0000107 NCBI chr 9:42,825,334...42,879,729
Ensembl chr 9:42,825,064...42,879,422 		JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within ISO MGI:5690193 (PMID:25811986) RGD PMID:25811986 NCBI chr 4:80,612,648...80,677,005
Ensembl chr 4:80,612,669...80,676,996 		JBrowse link
G Tff2 trefoil factor 2 acts_upstream_of ISO MGI:2179101 (PMID:11805131) RGD PMID:11805131 NCBI chr20:9,215,750...9,219,619
Ensembl chr20:9,215,761...9,219,619 		JBrowse link
gastric emptying term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO MGI:3723512 (PMID:17030183) RGD PMID:17030183 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267 		JBrowse link
G Nppc natriuretic peptide C involved_in ISO (PMID:23127564) RGD PMID:23127564 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3774275 (PMID:23127564)		 Ensembl
RGD		 PMID:23127564 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
gastric motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16012930 RGD:5131268 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
gastrin-induced gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949|MGI:3607154 (PMID:10862789), (PMID:15476751) RGD PMID:10862789 PMID:15476751 NCBI chr17:10,366,004...10,407,791
Ensembl chr17:10,368,298...10,407,631 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2389447 (PMID:17660684)		 Ensembl
RGD		 PMID:17660684 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
histamine-induced gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949|MGI:3607154 (PMID:10862789), (PMID:15476751) RGD PMID:10862789 PMID:15476751 NCBI chr17:10,366,004...10,407,791
Ensembl chr17:10,368,298...10,407,631 		JBrowse link
intestinal absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:24839994 RGD:11073681 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Aco1 aconitase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928268 (PMID:18177727)		 Ensembl
RGD		 PMID:18177727 GO_REF:0000107 NCBI chr 5:55,259,841...55,315,872
Ensembl chr 5:55,259,827...55,316,391 		JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:17507371)		 UniProt
RGD		 PMID:17507371 GO_REF:0000024 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903 		JBrowse link
G F11r F11 receptor involved_in ISO
IBA		 (PMID:23885123)
GO_REF:0000033		 RGD
GO_Central		 PMID:23885123 GO_REF:0000033 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402 		JBrowse link
G Fabp1 fatty acid binding protein 1 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788 		JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089 		JBrowse link
G Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type acts_upstream_of_or_within ISO MGI:3849681 (PMID:19349303) RGD PMID:19349303 NCBI chr 8:70,689,173...70,696,476
Ensembl chr 8:70,686,844...70,699,562 		JBrowse link
G Ireb2 iron responsive element binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:87879 (PMID:18177727)		 Ensembl
RGD		 PMID:18177727 GO_REF:0000107 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IMP PMID:16314573 UniProt PMID:16314573 RGD:10412292 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Lep leptin involved_in ISO
ISS		 (PMID:24340098)
GO_REF:0000024		 RGD
UniProt		 PMID:24340098 GO_REF:0000024 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 acts_upstream_of_or_within ISO (PMID:14966132) RGD PMID:14966132 NCBI chr 1:153,521,813...153,545,756
Ensembl chr 1:153,521,815...153,545,756 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:22021714) RGD PMID:22021714 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778 		JBrowse link
G Slc5a1 solute carrier family 5 member 1 acts_upstream_of_or_within TAS
ISO		 (PMID:15601832) RGD PMID:15601832 PMID:16204409 RGD:1624259 NCBI chr14:77,553,990...77,618,589
Ensembl chr14:77,553,843...77,618,547 		JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IMP RGD PMID:16946558 RGD:2303071 NCBI chr 4:175,172,390...175,254,598
Ensembl chr 4:174,710,004...175,254,573 		JBrowse link
G Tjp2 tight junction protein 2 involved_in ISO (PMID:23885123) RGD PMID:23885123 NCBI chr 1:221,709,745...221,838,291
Ensembl chr 1:221,709,745...221,838,295 		JBrowse link
G Vdr vitamin D receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2183409 (PMID:11687634)		 Ensembl
RGD		 PMID:11687634 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17507371)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17507371 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903 		JBrowse link
G Cel carboxyl ester lipase involved_in ISO
IEA		 (PMID:12031288)
GO_REF:0000107		 RGD
Ensembl		 PMID:12031288 GO_REF:0000107 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA		 (PMID:17142622)
GO_REF:0000107		 RGD
Ensembl		 PMID:17142622 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580 		JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:29880681)		 Ensembl
RGD		 PMID:29880681 GO_REF:0000107 NCBI chr 7:130,901,717...131,001,512
Ensembl chr 7:130,901,717...131,001,473 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO
IBA		 (PMID:17140581)
(PMID:14976318)
GO_REF:0000033		 RGD
GO_Central		 PMID:14976318 PMID:17140581 GO_REF:0000033 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113 		JBrowse link
G Pnlip pancreatic lipase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2681122 (PMID:12915407)		 Ensembl
RGD		 PMID:12915407 GO_REF:0000107 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654 		JBrowse link
intestinal D-glucose absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q3V0K9|UniProtKB:Q62468 (PMID:22114352)		 Ensembl
RGD		 PMID:22114352 GO_REF:0000107 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Pls1 plastin 1 involved_in ISO UniProtKB:P26040|UniProtKB:Q62468 (PMID:22114352) RGD PMID:22114352 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Slc5a1 solute carrier family 5 member 1 involved_in TAS
ISO
ISS		 (PMID:22124465)
GO_REF:0000024		 RGD
UniProt		 PMID:22124465 PMID:15829715 GO_REF:0000024, RGD:1624261 NCBI chr14:77,553,990...77,618,589
Ensembl chr14:77,553,843...77,618,547 		JBrowse link
G Vil1 villin 1 involved_in ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (PMID:22114352) RGD PMID:22114352 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858 		JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:29454749) RGD PMID:29454749 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061 		JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO		 GO_REF:0000107
(PMID:26431948)		 Ensembl
RGD		 PMID:26431948 GO_REF:0000107 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:29420262) RGD PMID:29420262 NCBI chr13:47,666,446...47,687,383
Ensembl chr13:47,666,447...47,686,729 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2429649 (PMID:17681175)		 UniProt
RGD		 PMID:17681175 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20051628)		 Ensembl
RGD		 PMID:20051628 GO_REF:0000107 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
G Zfp830 zinc finger protein 830 acts_upstream_of_or_within ISO MGI:4950703 (PMID:23213458) RGD PMID:23213458 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523 		JBrowse link
intestinal iron absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Heph hephaestin involved_in ISS
ISO		 GO_REF:0000024
(PMID:9988272)		 UniProt
RGD		 PMID:9988272 GO_REF:0000024 NCBI chr  X:61,151,131...61,402,980
Ensembl chr  X:61,296,345...61,402,980 		JBrowse link
intestinal lipid absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp2 fatty acid binding protein 2 involved_in ISO (PMID:7883976) RGD PMID:7883976 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1888384 (PMID:25701869)		 Ensembl
RGD		 PMID:25701869 GO_REF:0000107 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISS
ISO		 GO_REF:0000024
(PMID:22851168)		 UniProt
RGD		 PMID:22851168 GO_REF:0000024 NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393 		JBrowse link
large intestinal transit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr4 5-hydroxytryptamine receptor 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:33481771)		 Ensembl
RGD		 PMID:33481771 GO_REF:0000107 NCBI chr18:55,765,981...55,949,921
Ensembl chr18:55,766,725...55,949,321 		JBrowse link
lipid digestion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 acts_upstream_of_or_within ISO MGI:1857807 (PMID:11121384) RGD PMID:11121384 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3803178 (PMID:22387004)		 Ensembl
RGD		 PMID:22387004 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16380386)		 UniProt
RGD		 PMID:16380386 GO_REF:0000024 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21177474)		 UniProt
RGD		 PMID:21177474 GO_REF:0000024 NCBI chr10:104,242,169...104,247,185
Ensembl chr10:104,242,223...104,246,589 		JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics involved_in IBA
ISO		 GO_REF:0000033
(PMID:30361697)		 GO_Central
RGD		 PMID:30361697 GO_REF:0000033 NCBI chr14:31,284,066...31,520,103
Ensembl chr14:31,284,184...31,522,431 		JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:33299969)		 Ensembl
RGD		 PMID:33299969 GO_REF:0000107 NCBI chr18:55,765,981...55,949,921
Ensembl chr18:55,766,725...55,949,321 		JBrowse link
G Muc13 mucin 13, cell surface associated involved_in ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:66,957,208...66,980,264
Ensembl chr11:66,960,595...66,984,727 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming involved_in ISO
ISS		 (PMID:17058067)
(PMID:33093110), (PMID:35337837)
GO_REF:0000024		 RGD
UniProt		 PMID:17058067 PMID:33093110 PMID:35337837 GO_REF:0000024 NCBI chr 1:196,799,494...196,831,740
Ensembl chr 1:196,799,517...196,831,756 		JBrowse link
G Muc4 mucin 4, cell surface associated involved_in ISO (PMID:17058067) RGD PMID:17058067 NCBI chr11:68,008,245...68,053,242 JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:17058067) RGD PMID:17058067 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177 		JBrowse link
G Pbld1 phenazine biosynthesis-like protein domain containing 1 involved_in ISO (PMID:17929853) RGD PMID:17929853 NCBI chr20:25,551,274...25,566,543
Ensembl chr20:25,551,275...25,565,614 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO
IEA		 (PMID:10944490)
GO_REF:0000107		 RGD
Ensembl		 PMID:10944490 GO_REF:0000107 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO (PMID:17929853) RGD PMID:17929853 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828 		JBrowse link
G Tff1 trefoil factor 1 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8836141 GO_REF:0000033, RGD:625375 NCBI chr20:9,235,736...9,239,597
Ensembl chr20:9,235,736...9,239,597 		JBrowse link
G Tff2 trefoil factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:9,215,750...9,219,619
Ensembl chr20:9,215,761...9,219,619 		JBrowse link
G Tff3 trefoil factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:9,193,259...9,197,969
Ensembl chr20:9,193,262...9,198,054 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:17128265) RGD PMID:17128265 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796 		JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:5297726 (PMID:21991385)
GO_REF:0000033		 InterPro
RGD
GO_Central		 PMID:21991385 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:104,607,031...104,640,128
Ensembl chr  X:104,607,031...104,639,249 		JBrowse link
mastication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:17707921) RGD PMID:17707921 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
negative regulation of defecation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:21277852 RGD:5491003 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Npsr1 neuropeptide S receptor 1 IMP RGD PMID:21708257 RGD:9831204 NCBI chr 8:22,606,946...22,831,558
Ensembl chr 8:22,606,946...22,831,558 		JBrowse link
negative regulation of gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO MGI:3723512 (PMID:17030183) RGD PMID:17030183 NCBI chr13:37,115,258...37,327,312
Ensembl chr13:37,115,102...37,328,267 		JBrowse link
G Nmu neuromedin U involved_in IDA PMID:12584108 UniProt PMID:12584108 RGD:1642125 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
G Ptger3 prostaglandin E receptor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Tff2 trefoil factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2179101 (PMID:11805131)		 GO_Central
RGD		 PMID:11805131 GO_REF:0000033 NCBI chr20:9,215,750...9,219,619
Ensembl chr20:9,215,761...9,219,619 		JBrowse link
negative regulation of gastric emptying term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U involved_in IDA PMID:12584108 UniProt PMID:12584108 RGD:1642125 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
negative regulation of gastrin-induced gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:15961884 RGD:10043339 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Sct secretin involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11123201 GO_REF:0000033, RGD:9590235 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
negative regulation of intestinal absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 IMP RGD PMID:23333829 RGD:11099975 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO
IEA		 (PMID:12469120)
GO_REF:0000107		 RGD
Ensembl		 PMID:12469120 GO_REF:0000107 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891 		JBrowse link
G Isx intestine-specific homeobox acts_upstream_of_or_within ISO MGI:3703167 (PMID:25701869) RGD PMID:25701869 NCBI chr19:13,217,637...13,239,754
Ensembl chr19:13,218,552...13,239,760 		JBrowse link
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563 		JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912 		JBrowse link
negative regulation of intestinal phytosterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563 		JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912 		JBrowse link
negative regulation of pancreatic amylase secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Madd MAP-kinase activating death domain IMP RGD PMID:23702376 RGD:9588639 NCBI chr 3:77,114,330...77,157,865
Ensembl chr 3:77,114,314...77,157,701 		JBrowse link
negative regulation of pancreatic juice secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA		 (PMID:18806227)
GO_REF:0000107		 RGD
Ensembl		 PMID:18806227 GO_REF:0000107 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722 		JBrowse link
G Stk39 serine threonine kinase 39 involved_in ISO (PMID:21317537) RGD PMID:21317537 NCBI chr 3:52,913,583...53,179,060
Ensembl chr 3:52,913,585...53,179,060 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21317537)		 Ensembl
RGD		 PMID:21317537 GO_REF:0000107 NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905 		JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 involved_in ISO (PMID:21317537) RGD PMID:21317537 NCBI chr  X:20,156,260...20,299,252
Ensembl chr  X:20,157,041...20,296,821 		JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 acts_upstream_of_or_within ISO (PMID:21317537) RGD PMID:21317537 NCBI chr10:86,202,552...86,219,655
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
negative regulation of saliva secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
pancreatic juice secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO (PMID:12801959) RGD PMID:12801959 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Aqp5 aquaporin 5 involved_in ISO
IEA		 (PMID:12801959)
GO_REF:0000107		 RGD
Ensembl		 PMID:12801959 GO_REF:0000107 NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209 		JBrowse link
G Cel carboxyl ester lipase involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:1854805)		 Ensembl
GO_Central
RGD		 PMID:1854805 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Copa COPI coat complex subunit alpha acts_upstream_of_or_within ISO (PMID:1429581) RGD PMID:1429581 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874 		JBrowse link
positive regulation of digestive system process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone IDA gut paracellular permeability RGD PMID:17234701 RGD:5491013 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919 		JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19258489 RGD:2304084 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490 		JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:14724155 RGD:9835340 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028 		JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in ISO (PMID:22045928) RGD PMID:22045928 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821 		JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:12393855) RGD PMID:12393855 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24650549)		 UniProt
RGD		 PMID:24650549 GO_REF:0000024 NCBI chr10:104,242,169...104,247,185
Ensembl chr10:104,242,223...104,246,589 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26833026)		 UniProt
RGD		 PMID:26833026 GO_REF:0000024 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in ISO (PMID:18005709) RGD PMID:18005709 NCBI chr10:38,008,303...38,035,474
Ensembl chr10:38,008,311...38,035,309 		JBrowse link
positive regulation of intestinal lipid absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:33168624)		 UniProt
RGD		 PMID:33168624 GO_REF:0000024 NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872 		JBrowse link
positive regulation of pancreatic amylase secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within ISO MGI:3056083 (PMID:18535671) RGD PMID:18535671 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897 		JBrowse link
positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cck cholecystokinin IDA RGD PMID:11964411 RGD:625521 NCBI chr 8:121,153,499...121,160,194
Ensembl chr 8:121,153,500...121,160,084 		JBrowse link
positive regulation of pancreatic juice secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npr3 natriuretic peptide receptor 3 IMP RGD PMID:12829435 RGD:1581460 NCBI chr 2:60,865,483...60,933,432
Ensembl chr 2:60,870,594...60,932,955 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18806227)		 Ensembl
RGD		 PMID:18806227 GO_REF:0000107 NCBI chr 1:95,041,967...95,047,358
Ensembl chr 1:95,041,967...95,047,377 		JBrowse link
G Sct secretin involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11123201 GO_REF:0000033, RGD:9590235 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 IDA RGD PMID:2755938 RGD:10044250 NCBI chr18:35,870,723...35,882,693
Ensembl chr18:35,824,550...35,882,642 		JBrowse link
positive regulation of pancreatic trypsinogen secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp13 matrix metallopeptidase 13 IDA RGD PMID:12771515 RGD:724699 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
positive regulation of saliva secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15727941), (PMID:9096382)		 UniProt
RGD		 PMID:9096382 PMID:15727941 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:4451714 (PMID:37216094)
GO_REF:0000107		 RGD
Ensembl		 PMID:37216094 GO_REF:0000107 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:21435446)		 UniProt
RGD		 PMID:21435446 GO_REF:0000024 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974 		JBrowse link
G Tac4 tachykinin precursor 4 acts_upstream_of_or_within ISO (PMID:11062498) RGD PMID:11062498 NCBI chr10:80,207,824...80,216,156
Ensembl chr10:80,207,610...80,216,156 		JBrowse link
positive regulation of small intestinal transit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:21874246 RGD:12910732 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246 PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865 		JBrowse link
regulation of gastric acid secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hip1r huntingtin interacting protein 1 related involved_in ISO (PMID:18535670) RGD PMID:18535670 NCBI chr12:32,590,164...32,618,841
Ensembl chr12:32,590,165...32,618,734 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16314573), (PMID:19491250)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16314573 PMID:19491250 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
regulation of gastric motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:23525979 RGD:12907567 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:23525979 RGD:12907567 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865 		JBrowse link
G Tymp thymidine phosphorylase involved_in ISO (PMID:9924029) RGD PMID:9924029 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874 		JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:16873401 RGD:1625276 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865 		JBrowse link
regulation of intestinal absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:22049154 RGD:8657330 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 involved_in ISO (PMID:23460639) RGD PMID:23460639 NCBI chr 5:144,110,010...144,264,037
Ensembl chr 5:144,111,906...144,237,821 		JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within ISO (PMID:10073953) RGD PMID:10073953 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 acts_upstream_of_or_within ISO MGI:2157148 (PMID:8962133) RGD PMID:8962133 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2157162 (PMID:9323588)		 Ensembl
RGD		 PMID:9323588 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (PMID:12114517) RGD PMID:12114517 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
regulation of intestinal D-glucose absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn15 claudin 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20727355), (PMID:23089202)		 UniProt
RGD		 PMID:20727355 PMID:23089202 GO_REF:0000024 NCBI chr12:19,698,167...19,708,419
Ensembl chr12:19,698,337...19,706,819 		JBrowse link
G Cldn2 claudin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23089202)		 Ensembl
RGD		 PMID:23089202 GO_REF:0000107 NCBI chr  X:103,459,870...103,473,794
Ensembl chr  X:103,459,780...103,474,838 		JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9512516)		 UniProt
RGD		 PMID:9512516 GO_REF:0000024 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
regulation of intestinal lipid absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn15 claudin 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23089202)		 UniProt
RGD		 PMID:23089202 GO_REF:0000024 NCBI chr12:19,698,167...19,708,419
Ensembl chr12:19,698,337...19,706,819 		JBrowse link
G Cldn2 claudin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23089202)		 Ensembl
RGD		 PMID:23089202 GO_REF:0000107 NCBI chr  X:103,459,870...103,473,794
Ensembl chr  X:103,459,780...103,474,838 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 IMP RGD PMID:18768481 RGD:10400848 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21177474)		 UniProt
RGD		 PMID:21177474 GO_REF:0000024 NCBI chr10:104,242,169...104,247,185
Ensembl chr10:104,242,223...104,246,589 		JBrowse link
regulation of saliva secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:19102732) RGD PMID:19102732 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Oprk1 opioid receptor, kappa 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9463367)		 UniProt
RGD		 PMID:9463367 GO_REF:0000024 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823 		JBrowse link
saliva secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp5 aquaporin 5 acts_upstream_of_or_within ISO MGI:2150059 (PMID:10400615), (PMID:10795927), (PMID:15647389) RGD PMID:10400615 PMID:10795927 PMID:15647389 NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209 		JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:205,567,226...205,583,001
Ensembl chr 1:205,567,220...205,582,356 		JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 acts_upstream_of_or_within ISO MGI:1888740 (PMID:10944224) RGD PMID:10944224 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:1277957 (PMID:16873365) RGD PMID:16873365 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198 		JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99923 (PMID:16873365)		 Ensembl
RGD		 PMID:16873365 GO_REF:0000107 NCBI chr 1:79,956,380...79,974,354
Ensembl chr 1:79,959,322...79,974,340 		JBrowse link
G Nkx2-3 NK2 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:38311164)		 Ensembl
RGD		 PMID:38311164 GO_REF:0000107 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083 		JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25745107)		 Ensembl
RGD		 PMID:25745107 GO_REF:0000107 NCBI chr18:28,128,740...28,144,554
Ensembl chr18:28,128,740...28,141,543 		JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 acts_upstream_of_or_within ISO MGI:3764882 (PMID:17956991) RGD PMID:17956991 NCBI chr 8:96,263,322...96,314,220
Ensembl chr 8:96,263,329...96,314,276 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    multicellular organismal process 8904
      digestion 141
        digestive system process + 123
        lipid digestion + 20
        polysaccharide digestion 0
        protein digestion 0
paths to the root