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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase III type 2 promoter sequence-specific DNA binding
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Accession:GO:0001003 term browser browse the term
Definition:Binding to a sequence of DNA that is a part of a type 2 promoter that controls transcription by RNA polymerase III. Type 2 promoters consist of an A box and a B box downstream of the transcription start site within the sequence within the sequence of the mature RNA. Type 2 promoters are found in many tRNA genes as well as in other small RNAs.
Synonyms:related_synonym: RNA polymerase III type 2 promoter DNA binding
 alt_id: GO:0001031


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RNA polymerase III type 2 promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf3c5 general transcription factor IIIC subunit 5 contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:11,893,867...11,914,187
Ensembl chr 3:11,893,875...11,914,180 		JBrowse link
G Maf1 MAF1 homolog, negative regulator of RNA polymerase III enables ISO
IEA		 (PMID:20233713)
GO_REF:0000107		 RGD
Ensembl		 PMID:20233713 GO_REF:0000107 NCBI chr 7:108,075,173...108,078,252
Ensembl chr 7:108,075,189...108,078,249 		JBrowse link
G Mtor mechanistic target of rapamycin kinase enables ISO
IEA		 (PMID:20233713)
GO_REF:0000107		 RGD
Ensembl		 PMID:20233713 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20807
    binding 17844
      organic cyclic compound binding 6225
        nucleic acid binding 3866
          transcription regulatory region nucleic acid binding 1303
            transcription cis-regulatory region binding 1298
              cis-regulatory region sequence-specific DNA binding 1051
                RNA polymerase III cis-regulatory region sequence-specific DNA binding 7
                  RNA polymerase III type 2 promoter sequence-specific DNA binding 3
Path 2
Term Annotations click to browse term
  molecular_function 20807
    binding 17844
      organic cyclic compound binding 6225
        nucleic acid binding 3866
          DNA binding 2286
            sequence-specific DNA binding 1472
              sequence-specific double-stranded DNA binding 1361
                transcription cis-regulatory region binding 1298
                  cis-regulatory region sequence-specific DNA binding 1051
                    RNA polymerase III cis-regulatory region sequence-specific DNA binding 7
                      RNA polymerase III type 2 promoter sequence-specific DNA binding 3
paths to the root