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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:epididymitis
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Accession:DOID:9402 term browser browse the term
Definition:Inflammation of the EPIDIDYMIS. Its clinical features include enlarged epididymis, a swollen SCROTUM; PAIN; PYURIA; and FEVER. It is usually related to infections in the URINARY TRACT, which likely spread to the EPIDIDYMIS through either the VAS DEFERENS or the lymphatics of the SPERMATIC CORD.
Synonyms:exact_synonym: epididymitides
 primary_id: MESH:D004823
 xref: ICD10CM:N45.1

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epididymitis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1b interleukin 1 beta ISO RGD PMID:29311626 RGD:13792835 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il6 interleukin 6 ISO RGD PMID:29311626 RGD:13792835 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:29311626 RGD:13792835 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14337
    disease of anatomical entity 14030
      reproductive system disease 2909
        male reproductive system disease 1842
          epididymis disease 3
            epididymitis 3
              epididymis adenomatoid tumor 0
              epididymo-orchitis + 0
              tuberculous epididymitis 0
Path 2
Term Annotations click to browse term
  disease 14337
    disease of anatomical entity 14030
      Urogenital Diseases 4572
        reproductive system disease 2909
          male reproductive system disease 1842
            epididymis disease 3
              epididymitis 3
                epididymis adenomatoid tumor 0
                epididymo-orchitis + 0
                tuberculous epididymitis 0
paths to the root