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ONTOLOGY REPORT - ANNOTATIONS


Term:systemic lupus erythematosus
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Accession:DOID:9074 term browser browse the term
Definition:A chronic, relapsing, inflammatory, and often febrile multisystemic disorder of connective tissue, characterized principally by involvement of the skin, joints, kidneys, and serosal membranes. It is of unknown etiology, but is thought to represent a failure of the regulatory mechanisms of the autoimmune system. The disease is marked by a wide range of system dysfunctions, an elevated erythrocyte sedimentation rate, and the formation of LE cells in the blood or bone marrow.
Synonyms:exact_synonym: Libman Sacks Disease;   Lupus Erythematosus Disseminatus;   SLE;   SLE - Lupus Erythematosus, systemic;   SLEH1;   SYSTEMIC LUPUS ERYTHEMATOSUS, HEMOLYTIC ANEMIA-RELATED;   disseminated lupus erythematosus
 narrow_synonym: EXCESS LYMPHOCYTE LOW MOLECULAR WEIGHT DNA;   excess LMW-DNA
 related_synonym: SLEB1;   SLEB10;   SLEB11;   SLEB12;   SLEB13;   SLEB14;   SLEB15;   SLEB2;   SLEB3;   SLEB4;   SLEB5;   SLEB6;   SLEB7;   SLEB8;   SLEB9;   SYSTEMIC LUPUS ERYTHEMATOSUS, ASSOCIATION WITH;   SYSTEMIC LUPUS ERYTHEMATOSUS, RESISTANCE TO, 1;   Systemic Lupus Erythematosus, Association With 2;   systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1;   systemic lupus erythematosus, susceptibility to;   systemic lupus erythematosus, susceptibility to, 1;   systemic lupus erythematosus, susceptibility to, 10;   systemic lupus erythematosus, susceptibility to, 11;   systemic lupus erythematosus, susceptibility to, 12;   systemic lupus erythematosus, susceptibility to, 13;   systemic lupus erythematosus, susceptibility to, 14;   systemic lupus erythematosus, susceptibility to, 15;   systemic lupus erythematosus, susceptibility to, 2;   systemic lupus erythematosus, susceptibility to, 3;   systemic lupus erythematosus, susceptibility to, 4;   systemic lupus erythematosus, susceptibility to, 5;   systemic lupus erythematosus, susceptibility to, 6;   systemic lupus erythematosus, susceptibility to, 7;   systemic lupus erythematosus, susceptibility to, 8;   systemic lupus erythematosus, susceptibility to, 9
 primary_id: MESH:D008180
 alt_id: OMIM:152700;   OMIM:300809;   OMIM:601744;   OMIM:605218;   OMIM:605480;   OMIM:607279;   OMIM:608437;   OMIM:609903;   OMIM:609939;   OMIM:610065;   OMIM:610066;   OMIM:610927;   OMIM:612251;   OMIM:612253;   OMIM:612254;   OMIM:612378;   OMIM:613145
 xref: GARD:10253;   ICD10CM:M32;   ICD10CM:M32.9;   ICD9CM:710.0;   NCI:C3201;   ORDO:536
For additional species annotation, visit the Alliance of Genome Resources.


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systemic lupus erythematosus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1331525
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 JBrowse link 3 5,519,921 5,558,390 RGD:10449040
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686827
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:6767309
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 119,389,480 119,393,845 RGD:6892717
G Anxa3 annexin A3 JBrowse link 14 14,371,921 14,426,503 RGD:11554173
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:7241863
RGD:7241864
G Atg5 autophagy related 5 JBrowse link 20 49,301,783 49,393,147 RGD:13592920
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:13592920
G Atrip ATR interacting protein JBrowse link 8 117,797,954 117,811,989 RGD:8554872
G Bank1 B-cell scaffold protein with ankyrin repeats 1 JBrowse link 2 241,273,763 241,545,527 RGD:9684976
RGD:8554872
RGD:11554173
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:13592920
G Blk BLK proto-oncogene, Src family tyrosine kinase JBrowse link 15 46,555,552 46,593,778 RGD:2316189
RGD:8554872
RGD:11554173
G C1qa complement C1q A chain JBrowse link 5 155,261,254 155,264,101 RGD:11554173
G C2 complement C2 JBrowse link 20 4,542,340 4,561,152 RGD:7421516
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:11040772
G C3ar1 complement C3a receptor 1 JBrowse link 4 155,681,767 155,691,240 RGD:5129560
G C4a complement C4A JBrowse link 20 2,651,599 2,678,183 RGD:5688260
G C4b complement C4B (Chido blood group) JBrowse link 20 4,302,344 4,316,752 RGD:5688260
RGD:13592920
G C5ar1 complement C5a receptor 1 JBrowse link 1 78,186,777 78,195,132 RGD:5129560
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5683623
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:11554173
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:11528535
RGD:11528536
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:5683895
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:6893428
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:6893428
G Cd226 CD226 molecule JBrowse link 18 86,299,392 86,394,772 RGD:11554173
G Cd4 Cd4 molecule JBrowse link 4 157,381,862 157,408,357 RGD:10058961
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5490522
RGD:7248721
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:7248426
RGD:13592920
RGD:11352248
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:6483457
G Cd80 Cd80 molecule JBrowse link 11 64,815,201 64,855,293 RGD:6902898
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:13592920
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:11554173
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:5684554
G Chaf1a chromatin assembly factor 1 subunit A JBrowse link 9 11,000,869 11,027,631 RGD:9587742
G Ciita class II, major histocompatibility complex, transactivator JBrowse link 10 5,212,621 5,260,641 RGD:5491190
RGD:5491204
RGD:5491203
G Clec16a C-type lectin domain containing 16A JBrowse link 10 5,002,196 5,196,914 RGD:11554173
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:8696021
RGD:11554173
G Cr2 complement C3d receptor 2 JBrowse link 13 113,890,274 113,927,824 RGD:7240710
RGD:11554173
RGD:8554872
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6907402
RGD:11554173
RGD:6909146
RGD:6909144
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:7257578
G Csk C-terminal Src kinase JBrowse link 8 62,405,714 62,424,707 RGD:11554173
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:7204684
RGD:8554872
RGD:7240710
RGD:7204691
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:6893428
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:7257684
G Cybb cytochrome b-245 beta chain JBrowse link X 14,578,330 14,610,049 RGD:13592920
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:5147672
RGD:1581249
RGD:5147680
G Def6 DEF6 guanine nucleotide exchange factor JBrowse link 20 7,788,120 7,809,011 RGD:11554173
G Dnase1 deoxyribonuclease 1 JBrowse link 10 11,757,681 11,760,672 RGD:7240710
G Dnase1l3 deoxyribonuclease 1-like 3 JBrowse link 15 18,710,492 18,736,476 RGD:11554173
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:9588656
RGD:9588670
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:9585739
G Eng endoglin JBrowse link 3 11,679,530 11,717,486 RGD:8554872
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:13592920
G Epor erythropoietin receptor JBrowse link 8 22,969,737 22,974,468 RGD:11041604
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508738
RGD:5508844
RGD:5508843
RGD:5508817
RGD:5508813
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link 8 33,756,634 33,879,625 RGD:11554173
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147772
RGD:5147776
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:8662433
RGD:13592920
RGD:11049450
RGD:8662437
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:5147916
RGD:11554173
RGD:7240710
RGD:5147984
RGD:5147979
RGD:5147976
RGD:5147973
RGD:5147972
RGD:5147926
G Fcgr2b Fc fragment of IgG receptor IIb JBrowse link 13 89,329,298 89,343,916 RGD:1547879
RGD:11056171
RGD:9588603
RGD:9588566
RGD:8554872
RGD:7240710
RGD:7240540
RGD:1547880
G Fcgr3a Fc fragment of IgG receptor IIIa JBrowse link 13 89,385,775 89,396,047 RGD:5508389
RGD:11344974
RGD:5508444
G Gadd45a growth arrest and DNA-damage-inducible, alpha JBrowse link 4 97,782,512 97,784,814 RGD:13592920
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5490989
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:5147600
G Hspa1l heat shock protein family A (Hsp70) member 1 like JBrowse link 20 4,879,998 4,965,191 RGD:5147600
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:12910480
G Ifih1 interferon induced with helicase C domain 1 JBrowse link 3 48,557,696 48,604,097 RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6893373
RGD:14974252
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 14 91,782,281 91,867,828 RGD:11554173
G Ikzf3 IKAROS family zinc finger 3 JBrowse link 10 86,420,757 86,509,454 RGD:13592920
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:1580478
RGD:11554173
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:11554173
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:8549582
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:8698667
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7401214
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6906963
RGD:6907356
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:8662948
G Il21 interleukin 21 JBrowse link 2 123,965,021 123,972,356 RGD:11554173
G Il21r interleukin 21 receptor JBrowse link 1 196,996,405 197,024,185 RGD:6892931
RGD:11554173
RGD:6892937
RGD:6892933
G Il23r interleukin 23 receptor JBrowse link 4 98,203,788 98,306,729 RGD:8549601
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:11554173
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:7241039
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Inpp5d inositol polyphosphate-5-phosphatase D JBrowse link 9 94,745,220 94,850,778 RGD:13592920
G Irak4 interleukin-1 receptor-associated kinase 4 JBrowse link 7 135,803,723 135,831,006 RGD:11554173
G Irf5 interferon regulatory factor 5 JBrowse link 4 56,804,477 56,816,271 RGD:8554872
RGD:7240710
RGD:11554173
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:11554173
G Jak1 Janus kinase 1 JBrowse link 5 119,982,503 120,091,452 RGD:13592920
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:6483022
G Jazf1 JAZF zinc finger 1 JBrowse link 4 82,834,181 83,141,430 RGD:11554173
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 26,092,972 26,094,756 RGD:13592920
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:7327150
G Lbr lamin B receptor JBrowse link 13 100,431,390 100,450,209 RGD:13592920
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:5490253
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 5 16,526,058 16,642,648 RGD:13592920
G Man2a1 mannosidase, alpha, class 2A, member 1 JBrowse link 9 112,293,388 112,451,677 RGD:13592920
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:6903266
RGD:5147979
G Mir196a microRNA 196a JBrowse link 7 144,584,235 144,584,344 RGD:11554173
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:6483529
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7207129
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:5490259
G Mta2 metastasis associated 1 family, member 2 JBrowse link 1 225,140,863 225,149,584 RGD:13592920
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:5147680
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:11554173
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5508746
RGD:13204710
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5508848
G P2ry12 purinergic receptor P2Y12 JBrowse link 2 149,440,807 149,482,592 RGD:6480537
RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:11074797
G Pcnx3 pecanex 3 JBrowse link 1 221,019,091 221,041,959 RGD:11554173
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:7248674
RGD:11554173
RGD:7240710
RGD:7248679
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:6483612
G Phrf1 PHD and ring finger domains 1 JBrowse link 1 214,215,673 214,248,906 RGD:11554173
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma JBrowse link 6 51,465,696 51,501,234 RGD:6482698
G Pld4 phospholipase D family, member 4 JBrowse link 6 137,323,713 137,331,231 RGD:13592920
G Polb DNA polymerase beta JBrowse link 16 74,237,001 74,260,272 RGD:13592920
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:13592920
G Ppp2r2b protein phosphatase 2, regulatory subunit B, beta JBrowse link 18 36,985,709 37,421,383 RGD:5686291
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:11554173
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482798
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 JBrowse link 2 206,342,066 206,390,348 RGD:5147973
RGD:8554872
RGD:11554173
RGD:11534992
RGD:11533999
RGD:11532755
RGD:7240710
G Ptprc protein tyrosine phosphatase, receptor type, C JBrowse link 13 55,061,561 55,174,150 RGD:13592920
G Pxk PX domain containing serine/threonine kinase JBrowse link 15 18,548,209 18,616,617 RGD:11554173
G Rasgrp1 RAS guanyl releasing protein 1 JBrowse link 3 108,984,029 109,044,420 RGD:11554173
G Rasgrp3 RAS guanyl releasing protein 3 JBrowse link 6 21,072,634 21,171,619 RGD:11554173
G Rassf5 Ras association domain family member 5 JBrowse link 13 47,956,754 48,022,333 RGD:13592920
G Rc3h1 ring finger and CCCH-type domains 1 JBrowse link 13 78,723,028 78,794,663 RGD:13592920
G Retn resistin JBrowse link 12 2,201,909 2,203,649 RGD:7207148
G Ro60 Ro60, Y RNA binding protein JBrowse link 13 60,546,892 60,567,882 RGD:13592920
G Rpl12 ribosomal protein L12 JBrowse link 3 12,009,578 12,011,952 RGD:11035232
G Rpl14 ribosomal protein L14 JBrowse link 8 129,240,528 129,243,400 RGD:11036103
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:11554173
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147560
RGD:5147620
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147560
RGD:11554173
RGD:5147581
G Rubcn rubicon autophagy regulator JBrowse link 11 71,150,506 71,199,254 RGD:13592920
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:13592920
G Sell selectin L JBrowse link 13 82,369,820 82,387,774 RGD:7175284
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:4143493
G Sh2b3 SH2B adaptor protein 3 JBrowse link 12 40,261,990 40,265,757 RGD:11554173
G Siglec5 sialic acid binding Ig-like lectin 5 JBrowse link 1 98,562,351 98,570,992 RGD:11554173
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684928
G Slc15a4 solute carrier family 15 member 4 JBrowse link 12 32,753,824 32,773,277 RGD:11554173
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:10448935
RGD:10448939
G Snrpc small nuclear ribonucleoprotein polypeptide C JBrowse link 20 7,409,401 7,427,581 RGD:10766446
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide JBrowse link 18 1,866,066 1,876,613 RGD:10755713
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide JBrowse link 1 80,057,140 80,059,990 RGD:10766471
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 20 14,080,562 14,095,644 RGD:10755704
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1581249
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:7207867
RGD:7240710
RGD:11554173
RGD:8554872
RGD:7207881
RGD:7207879
RGD:7207878
RGD:7207877
RGD:7207874
RGD:7207869
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:11554173
G Tap1 transporter 1, ATP binding cassette subfamily B member JBrowse link 20 3,979,302 3,989,669 RGD:6482277
G Tap2 transporter 2, ATP binding cassette subfamily B member JBrowse link 20 3,995,544 4,009,587 RGD:6482273
RGD:6482277
G Tcf7 transcription factor 7 JBrowse link 10 37,616,033 37,646,027 RGD:11554173
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11554173
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:11060258
G Thbd thrombomodulin JBrowse link 3 142,748,673 142,752,325 RGD:5684995
G Timd4 T-cell immunoglobulin and mucin domain containing 4 JBrowse link 10 31,880,822 31,917,215 RGD:13592920
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:7241088
G Tlr5 toll-like receptor 5 JBrowse link 13 101,364,784 101,385,764 RGD:8554872
RGD:11554173
RGD:7240710
G Tlr7 toll-like receptor 7 JBrowse link X 28,486,836 28,513,004 RGD:13592920
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130767
RGD:7246894
RGD:7245988
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7245570
RGD:8554872
RGD:7245571
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:11554173
G Tnfrsf13b TNF receptor superfamily member 13B JBrowse link 10 47,399,834 47,422,907 RGD:13592920
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:7245539
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:7245539
RGD:7245571
G Tnfsf4 TNF superfamily member 4 JBrowse link 13 79,269,973 79,293,775 RGD:11554173
G Tnip1 TNFAIP3 interacting protein 1 JBrowse link 10 40,255,776 40,303,092 RGD:11554173
G Traf3ip2 Traf3 interacting protein 2 JBrowse link 20 44,679,861 44,722,874 RGD:13592920
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:7240710
RGD:8554872
RGD:11554173
G Uhrf1bp1 UHRF1 binding protein 1 JBrowse link 20 7,431,235 7,475,515 RGD:11554173
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7241211
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480476
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta JBrowse link 3 160,391,108 160,399,931 RGD:1331525
C1q Deficiency term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qa complement C1q A chain JBrowse link 5 155,261,254 155,264,101 RGD:7240710
RGD:8554872
G C1qb complement C1q B chain JBrowse link 5 155,246,444 155,251,995 RGD:7240710
RGD:8554872
G C1qc complement C1q C chain JBrowse link 5 155,255,013 155,258,631 RGD:7240710
RGD:8554872
lupus nephritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:6767309
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:7207211
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7175544
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8549732
RGD:11528534
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:7241814
G Ccr1 C-C motif chemokine receptor 1 JBrowse link 8 132,996,646 133,002,201 RGD:5688164
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:7248418
RGD:7248429
RGD:7248425
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:7248426
RGD:7248714
RGD:7248710
RGD:7248600
RGD:7248439
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7242736
RGD:7242763
RGD:7242755
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:5684551
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:8890679
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:5688301
RGD:5688333
RGD:5688332
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6907400
RGD:6909146
RGD:6909145
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:7257567
RGD:7257589
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:7204726
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:5688301
G Fcgr2a Fc fragment of IgG receptor IIa JBrowse link 13 91,146,878 91,163,691 RGD:5147975
RGD:8554872
G Fcgr2b Fc fragment of IgG receptor IIb JBrowse link 13 89,329,298 89,343,916 RGD:7240529
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6893369
RGD:14974252
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:9244623
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:6893449
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7175315
RGD:7175344
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:6907068
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:5147916
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:7327150
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:12910847
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:11554173
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:11554173
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:7174701
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:7245502
G Muc20 mucin 20, cell surface associated JBrowse link 11 71,222,602 71,236,223 RGD:7364790
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:7174713
RGD:7174734
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 1 222,451,674 222,459,952 RGD:7175260
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:7248675
RGD:7248678
RGD:7248676
G Sell selectin L JBrowse link 13 82,369,820 82,387,774 RGD:7175284
G Serping1 serpin family G member 1 JBrowse link 3 72,161,230 72,171,109 RGD:11554173
G Snrpe small nuclear ribonucleoprotein polypeptide E JBrowse link 13 50,252,707 50,258,951 RGD:10760401
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:6893449
G Stat6 signal transducer and activator of transcription 6 JBrowse link 7 70,946,228 70,963,542 RGD:7244140
G Tlr7 toll-like receptor 7 JBrowse link X 28,486,836 28,513,004 RGD:7246905
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:7245987
RGD:7246911
RGD:7246897
RGD:7246896
RGD:7245989
RGD:7246884
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7394786
G Tnfrsf11b TNF receptor superfamily member 11B JBrowse link 7 93,798,580 93,826,586 RGD:7205483
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:7245569
RGD:7245572
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:7245541
RGD:7245544
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7241032
Lupus Vasculitis, Central Nervous System term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcgr3a Fc fragment of IgG receptor IIIa JBrowse link 13 89,385,775 89,396,047 RGD:11554173
G Itgam integrin subunit alpha M JBrowse link 1 199,495,312 199,545,738 RGD:11554173
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:6478687
Systemic Lupus Erythematosus 16 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1l3 deoxyribonuclease 1-like 3 JBrowse link 15 18,710,492 18,736,476 RGD:7240710
RGD:8554872
G Eng endoglin JBrowse link 3 11,679,530 11,717,486 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15602
    disease of anatomical entity 14933
      musculoskeletal system disease 4326
        autoimmune disease of musculoskeletal system 839
          rheumatic disease 826
            systemic lupus erythematosus 197
              C1q Deficiency 3
              Lupus Vasculitis, Central Nervous System 3
              Neonatal Systemic Lupus Erythematosus 0
              Systemic Lupus Erythematosus 16 2
              Systemic Lupus Erythematosus with Nephritis 0
              lupus nephritis 46
Path 2
Term Annotations click to browse term
  disease 15602
    disease of anatomical entity 14933
      Immune & Inflammatory Diseases 3138
        immune system disease 2553
          hypersensitivity reaction disease 1506
            autoimmune hypersensitivity disease 1209
              autoimmune disease of musculoskeletal system 839
                rheumatic disease 826
                  systemic lupus erythematosus 197
                    C1q Deficiency 3
                    Lupus Vasculitis, Central Nervous System 3
                    Neonatal Systemic Lupus Erythematosus 0
                    Systemic Lupus Erythematosus 16 2
                    Systemic Lupus Erythematosus with Nephritis 0
                    lupus nephritis 46
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.