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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Breast Neoplasms
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Accession:DOID:9008939 term browser browse the term
Definition:Tumors or cancer of the human BREAST.
Synonyms:exact_synonym: breast neoplasm;   breast tumor;   breast tumors;   human mammary neoplasm;   human mammary neoplasms
 narrow_synonym: BRIP1-related disorder
 primary_id: MESH:D001943
 xref: EFO:0003869


show annotations for term's descendants           Sort by:
Breast Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA8 ATP binding cassette subfamily A member 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35191604 NCBI chr12:11,366,734...11,447,297
Ensembl chr12:11,373,238...11,447,295 		JBrowse link
G ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 ISO CTD Direct Evidence: marker/mechanism
DNA:polymorphism: :3435C>T (human)		 CTD
RGD		 PMID:19752884 PMID:22311042 RGD:2315550 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G ABCC1 ATP binding cassette subfamily C member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25078270 NCBI chr 3:28,360,868...28,472,940
Ensembl chr 3:28,360,873...28,473,456 		JBrowse link
G ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10930538 NCBI chr 8:130,853,414...130,945,388
Ensembl chr 8:130,889,684...130,945,393 		JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:20234815 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G ACACB acetyl-CoA carboxylase beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:35191604 NCBI chr14:41,621,574...41,739,916
Ensembl chr14:41,621,574...41,739,916 		JBrowse link
G ACHE acetylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23063927 NCBI chr 3:8,732,451...8,738,274
Ensembl chr 3:8,732,441...8,738,605 		JBrowse link
G ACTA2 actin alpha 2, smooth muscle ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr14:100,868,145...100,886,732
Ensembl chr14:100,867,733...100,886,713 		JBrowse link
G ACVR1 activin A receptor type 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23180569 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16583263 NCBI chr 1:113,289,480...113,407,940
Ensembl chr 1:113,289,209...113,412,798 		JBrowse link
G ADAM33 ADAM metallopeptidase domain 33 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30226539 NCBI chr17:32,023,102...32,038,464
Ensembl chr17:32,023,091...32,037,880 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23289900 NCBI chr13:190,277,175...190,285,957
Ensembl chr13:190,276,430...190,286,214 		JBrowse link
G ADAR adenosine deaminase RNA specific ISO CTD Direct Evidence: marker/mechanism CTD PMID:28188287 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,304 		JBrowse link
G AFP alpha fetoprotein ISO CTD Direct Evidence: therapeutic CTD PMID:18497072 NCBI chr 8:69,677,690...69,698,864
Ensembl chr 8:69,677,690...69,698,864 		JBrowse link
G AGER advanced glycosylation end-product specific receptor no_association ISO DNA:SNPs, insertion/deletion:promoter, :-374T>A, -429T/C (human)
DNA:SNP, haplotype: :rs184003 (human)		 RGD PMID:18058469 PMID:22497255 PMID:24619131 RGD:8695964 RGD:8695984 RGD:8695989 NCBI chr 7:24,218,116...24,221,162
Ensembl chr 7:24,218,120...24,221,162 		JBrowse link
G AGR2 anterior gradient 2, protein disulphide isomerase family member ISO CTD Direct Evidence: marker/mechanism CTD PMID:20531310 NCBI chr 9:86,042,070...86,053,893
Ensembl chr 9:86,041,369...86,053,857 		JBrowse link
G AHR aryl hydrocarbon receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21515334 PMID:22296396 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943 		JBrowse link
G AKAP12 A-kinase anchoring protein 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 1:14,904,109...15,017,016
Ensembl chr 1:14,908,115...15,016,997 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 susceptibility ISO DNA:point mutation:cds:p.E17K (human)
ClinVar Annotator: match by term: Breast Neoplasms		 RGD
ClinVar		 PMID:17611497 PMID:18256540 PMID:18392055 PMID:18504432 PMID:18611285 More... RGD:1643334
G AKT2 AKT serine/threonine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19075277 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,795...48,587,919 		JBrowse link
G ALDOA aldolase, fructose-bisphosphate A ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr 3:18,246,036...18,260,167
Ensembl chr 3:18,253,384...18,260,163 		JBrowse link
G ALK ALK receptor tyrosine kinase ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:18724359 PMID:18923523 PMID:18923524 PMID:18923525 PMID:21242967 More... NCBI chr 3:109,411,146...110,105,755 JBrowse link
G ALKBH8 alkB homolog 8, tRNA methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 9:36,077,004...36,119,936
Ensembl chr 9:36,077,192...36,119,920 		JBrowse link
G ANG angiogenin disease_progression ISO protein:increased expression:breast RGD PMID:9539780 PMID:9748135 PMID:15776477 RGD:2325702 RGD:2325712 RGD:2325714 NCBI chr 7:78,249,479...78,262,846
Ensembl chr 7:78,249,487...78,250,138 		JBrowse link
G ANGPTL4 angiopoietin like 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21489049 NCBI chr 2:70,905,767...70,912,892
Ensembl chr 2:70,904,531...70,912,974 		JBrowse link
G ANKRD34A ankyrin repeat domain 34A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 4:99,377,555...99,382,322
Ensembl chr 4:99,378,714...99,382,810 		JBrowse link
G ANXA1 annexin A1 disease_progression ISO RGD PMID:20353277 RGD:7421540 NCBI chr 1:226,414,200...226,431,963
Ensembl chr 1:226,414,306...226,432,279 		JBrowse link
G APC2 APC regulator of WNT signaling pathway 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 2:77,005,706...77,034,583
Ensembl chr 2:77,005,706...77,034,561 		JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B ISO CTD Direct Evidence: marker/mechanism CTD PMID:23389445 PMID:23852168 PMID:24728294 PMID:27643540 NCBI chr 5:9,098,676...9,115,965
Ensembl chr 5:9,097,719...9,116,369 		JBrowse link
G APRT adenine phosphoribosyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 6:890,272...893,278
Ensembl chr 6:890,831...893,276 		JBrowse link
G AR androgen receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21633166 PMID:22174584 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,800,677 		JBrowse link
G ARAF A-Raf proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: therapeutic CTD PMID:12432273 NCBI chr  X:42,078,202...42,090,250
Ensembl chr  X:42,078,206...42,090,250 		JBrowse link
G AREG amphiregulin ISO CTD Direct Evidence: therapeutic CTD PMID:11237771 NCBI chr 8:70,417,935...70,428,106
Ensembl chr 8:70,417,923...70,428,102 		JBrowse link
G ARF1 ADP ribosylation factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27517156 NCBI chr 2:51,219,597...51,237,640
Ensembl chr 2:51,219,667...51,237,639 		JBrowse link
G ARHGDIA Rho GDP dissociation inhibitor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr12:1,113,358...1,117,319
Ensembl chr12:1,113,379...1,119,315 		JBrowse link
G ARID1A AT-rich interaction domain 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:31932695 NCBI chr 6:84,049,729...84,124,302
Ensembl chr 6:84,049,087...84,123,349 		JBrowse link
G ARRDC3 arrestin domain containing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25038754 NCBI chr 2:98,430,451...98,444,835
Ensembl chr 2:98,430,465...98,444,647 		JBrowse link
G ARTN artemin ISO CTD Direct Evidence: marker/mechanism CTD PMID:20305694 NCBI chr 6:167,356,363...167,361,370
Ensembl chr 6:167,357,662...167,360,729 		JBrowse link
G ATG10 autophagy related 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:90,436,795...90,665,383
Ensembl chr 2:90,437,027...90,666,196 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:6504056 PMID:7792600 PMID:8755918 PMID:8797579 PMID:8808599 More... NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552 		JBrowse link
G ATP6AP1L ATPase H+ transporting accessory protein 1 like ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:90,680,982...90,741,469 JBrowse link
G ATP7B ATPase copper transporting beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:11802810 NCBI chr11:15,892,549...15,942,070
Ensembl chr11:15,876,612...15,942,064 		JBrowse link
G AURKA aurora kinase A ISO CTD Direct Evidence: marker/mechanism CTD PMID:18497064 NCBI chr17:56,954,838...56,972,435 JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:6,043,594...6,045,220
Ensembl chr 2:6,043,508...6,045,817 		JBrowse link
G BAG1 BAG cochaperone 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19066611 NCBI chr10:33,227,530...33,240,731
Ensembl chr10:33,227,338...33,240,724 		JBrowse link
G BAP1 BRCA1 associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25231345 PMID:26719535 NCBI chr13:34,544,570...34,553,538
Ensembl chr13:34,544,581...34,553,483 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:20077502 PMID:21344236 PMID:25741868 PMID:26315354 PMID:26467025 More... NCBI chr15:117,049,483...117,135,889
Ensembl chr15:117,047,845...117,175,851 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO CTD Direct Evidence: therapeutic CTD PMID:22572619 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,140 		JBrowse link
G BCAR3 BCAR3 adaptor protein, NSP family member ISO CTD Direct Evidence: marker/mechanism CTD PMID:19075277 NCBI chr 4:123,440,571...123,666,603
Ensembl chr 4:123,440,571...123,666,598 		JBrowse link
G BCHE butyrylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23063927 NCBI chr13:104,946,732...105,007,568 JBrowse link
G BCL2A1 BCL2 related protein A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 PMID:17659439 NCBI chr 7:48,887,227...48,897,667
Ensembl chr 7:48,887,094...48,897,870 		JBrowse link
G BCL2L1 BCL2 like 1 ISO RGD PMID:17675586 RGD:1643478 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,143...35,414,694 		JBrowse link
G BGN biglycan ISO CTD Direct Evidence: marker/mechanism CTD PMID:35234341 NCBI chr  X:124,282,048...124,295,450
Ensembl chr  X:124,275,305...124,295,445 		JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:blood
protein:increased expression:breast		 CTD
RGD		 PMID:16322251 PMID:16818634 PMID:17086357 PMID:17240580 PMID:18227733 More... RGD:2293090 RGD:2293092 RGD:2293104 RGD:2293105 NCBI chr12:3,747,276...3,755,214
Ensembl chr12:3,747,279...3,755,215 		JBrowse link
G BMP2 bone morphogenetic protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23180569 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23180569 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:2102266 PMID:12068308 PMID:15035987 PMID:17314276 PMID:18039235 More... NCBI chr18:8,957,963...9,132,558
Ensembl chr18:8,957,991...9,132,553 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:824983 PMID:2152385 PMID:2504116 PMID:3175448 PMID:6455195 More... NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668 		JBrowse link
G BRCA2 BRCA2 DNA repair associated susceptibility ISO DNA:mutation
ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm
ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor		 RGD
ClinVar		 PMID:8075631 PMID:8524414 PMID:8665505 PMID:8673091 PMID:8673092 More... RGD:1599503 NCBI chr11:8,805,950...8,858,128
Ensembl chr11:8,805,953...8,858,418 		JBrowse link
G BRF1 BRF1 RNA polymerase III transcription initiation factor subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:32198086
G BRIP1 BRCA1 interacting helicase 1 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:2455662 PMID:16116421 PMID:16116423 PMID:16116424 PMID:16153896 More... NCBI chr12:36,498,138...36,639,847
Ensembl chr12:36,498,205...36,635,973 		JBrowse link
G BTK Bruton tyrosine kinase ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:24869598 PMID:25082755 PMID:25189416 PMID:25741868 PMID:27199251 More... NCBI chr  X:82,981,512...83,014,475
Ensembl chr  X:82,981,515...83,014,573 		JBrowse link
G C1QBP complement C1q binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr12:51,548,361...51,553,076
Ensembl chr12:51,548,415...51,555,689 		JBrowse link
G C9H11orf65 chromosome 9 C11orf65 homolog ISO ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:6504056 PMID:7792600 PMID:8755918 PMID:8797579 PMID:8808599 More... NCBI chr 9:36,768,819...36,855,318
Ensembl chr 9:36,776,897...36,849,710 		JBrowse link
G CADM1 cell adhesion molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17260099 NCBI chr 9:42,644,487...42,984,934
Ensembl chr 9:42,644,429...42,985,017 		JBrowse link
G CASP6 caspase 6 ISO protein:increased expression:breast RGD PMID:10574243 PMID:15210759 RGD:2301338 RGD:2301339 NCBI chr 8:112,519,450...112,534,315
Ensembl chr 8:112,520,629...112,537,045 		JBrowse link
G CASP7 caspase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16583263 NCBI chr14:124,017,776...124,050,369
Ensembl chr14:124,019,164...124,050,365 		JBrowse link
G CASP8 caspase 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15601643 PMID:17293864 PMID:17450141 PMID:29915430 NCBI chr15:104,923,659...104,948,470
Ensembl chr15:104,923,953...104,948,468 		JBrowse link
G CAT catalase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25322848 NCBI chr 2:26,493,664...26,533,881
Ensembl chr 2:26,487,653...26,581,452 		JBrowse link
G CAV1 caveolin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19234134 PMID:19288272 PMID:20562527 PMID:21501481 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465 		JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr15:129,172,743...129,176,069 JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:18708360 RGD:4891915 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118 		JBrowse link
G CCND1 cyclin D1 disease_progression
susceptibility		 ISO protein:increased expression:breast
DNA:polymorphism
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:12839951 PMID:15647071 PMID:17255770 PMID:18194538 PMID:19636701 More... RGD:2289126 RGD:2289131 NCBI chr 2:3,621,242...3,633,380
Ensembl chr 2:3,621,246...3,633,296 		JBrowse link
G CCND2 cyclin D2 ISO DNA:hypermethylation:breast
DNA, mRNA, protein:hypermethylation, decreased expression:promoter, breast		 RGD PMID:11289162 PMID:17549626 RGD:2289149 RGD:2289158 NCBI chr 5:66,092,483...66,114,575
Ensembl chr 5:66,087,379...66,114,571 		JBrowse link
G CCND3 cyclin D3 ISO DNA:polymorphism:promoter:-677C>T (human) RGD PMID:19142864 RGD:2316005 NCBI chr 7:37,087,336...37,182,462
Ensembl chr 7:37,082,097...37,181,366 		JBrowse link
G CCNE1 cyclin E1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19385967 PMID:23624423 NCBI chr 6:39,919,541...39,933,224
Ensembl chr 6:39,919,624...39,933,366 		JBrowse link
G CCNH cyclin H ISO CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 2:94,980,938...95,019,053
Ensembl chr 2:94,980,941...95,018,634 		JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr16:72,211,452...72,223,202
Ensembl chr16:72,208,012...72,223,114 		JBrowse link
G CD109 CD109 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 1:92,081,675...92,241,079
Ensembl chr 1:92,054,821...92,286,730 		JBrowse link
G CD40 CD40 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:17043144 NCBI chr17:48,286,116...48,298,188
Ensembl chr17:48,286,029...48,298,528 		JBrowse link
G CD44 CD44 molecule ISO mRNA:splice variants:breast RGD PMID:18091389 RGD:2289345 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153 		JBrowse link
G CD74 CD74 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:19602265 NCBI chr 2:151,402,210...151,409,924
Ensembl chr 2:151,402,211...151,409,833 		JBrowse link
G CDA cytidine deaminase ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:10811482 PMID:25330770 NCBI chr 6:78,824,248...78,849,154
Ensembl chr 6:78,824,270...78,849,547 		JBrowse link
G CDH1 cadherin 1 ISO ClinVar Annotator: match by term: Breast tumor ClinVar PMID:11305955 PMID:22703879 PMID:24728327 PMID:25741868 PMID:28492532 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986 		JBrowse link
G CDH2 cadherin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432 		JBrowse link
G CDH5 cadherin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A disease_progression ISO DNA:snp: :rs3176336 RGD PMID:16537179 PMID:18174243 RGD:2289652 RGD:2289656 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761 		JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:17092400 NCBI chr 5:59,731,224...59,735,831
Ensembl chr 5:59,731,206...59,735,831 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A susceptibility ISO protein:decreased expression:breast
DNA:missense mutation: :p.A148T
DNA:hypermethylation:promoter
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:8686738 PMID:15879498 PMID:20948315 PMID:23712779 RGD:2289688 RGD:2289690 RGD:8552384 NCBI chr 1:200,774,496...200,799,149
Ensembl chr 1:200,792,469...200,798,854 		JBrowse link
G CENPF centromere protein F ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 9:128,948,386...129,012,241
Ensembl chr 9:128,948,498...129,012,218 		JBrowse link
G CFL1 cofilin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
G CFTR CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:10925568 PMID:12874665 PMID:15905293 PMID:17539902 PMID:25580864 More... NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950 		JBrowse link
G CHEK1 checkpoint kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25688741 NCBI chr 9:52,759,224...52,790,878
Ensembl chr 9:52,753,528...52,790,700 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:10617473 PMID:11053450 PMID:11479205 PMID:11719428 PMID:11967536 More... NCBI chr14:45,699,833...45,967,350
Ensembl chr14:45,929,715...45,967,290 		JBrowse link
G CKS1B CDC28 protein kinase regulatory subunit 1B ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar NCBI chr 4:94,815,769...94,819,583
Ensembl chr 4:94,815,771...94,819,597 		JBrowse link
G CLDN1 claudin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19579870 PMID:24014025 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN4 claudin 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19142967 NCBI chr 3:11,039,711...11,053,930
Ensembl chr 3:11,039,706...11,053,925 		JBrowse link
G CLIC1 chloride intracellular channel 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr 7:23,842,829...23,851,162 JBrowse link
G CLU clusterin treatment
severity		 ISO RGD PMID:17203891 PMID:22613415 RGD:8729187 RGD:8764690 NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,595...11,349,764 		JBrowse link
G CLUL1 clusterin like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 6:105,662,585...105,707,323
Ensembl chr 6:105,667,366...105,788,665 		JBrowse link
G CMC2 C-X9-C motif containing 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 6:7,254,937...7,278,714 JBrowse link
G CNR2 cannabinoid receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16818634 NCBI chr 6:81,659,162...81,692,550
Ensembl chr 6:81,659,169...81,692,550 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr13:31,262,750...31,295,112 JBrowse link
G COMT catechol-O-methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:9407957 PMID:15455371 PMID:16077979 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998 		JBrowse link
G COTL1 coactosin like F-actin binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr 6:4,099,341...4,146,281
Ensembl chr 6:4,099,414...4,147,469 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,911 		JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain disease_progression ISO RGD PMID:17651480 RGD:2298902 NCBI chr 5:89,257,603...89,480,414
Ensembl chr 5:89,267,944...89,479,712 		JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr12:17,251,361...17,306,308
Ensembl chr12:17,252,020...17,306,285 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein ISO RGD PMID:16391854 RGD:7488899 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,955...50,558,662 		JBrowse link
G CSF1 colony stimulating factor 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD		 PMID:16618760 RGD:2293640 NCBI chr 4:110,178,466...110,198,232
Ensembl chr 4:110,178,475...110,197,900 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16618760 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,147...151,147,633 		JBrowse link
G CSF2 colony stimulating factor 2 ISO CTD Direct Evidence: therapeutic CTD PMID:11325840 NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155 		JBrowse link
G CSF3 colony stimulating factor 3 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:7541186 PMID:7543699 PMID:7692001 PMID:9018096 PMID:12926135 More... NCBI chr12:22,333,445...22,335,949
Ensembl chr12:22,333,449...22,338,753 		JBrowse link
G CST6 cystatin E/M ISO CTD Direct Evidence: marker/mechanism CTD PMID:17043665 NCBI chr 2:6,323,737...6,325,519
Ensembl chr 2:6,323,740...6,325,415 		JBrowse link
G CTNNA1 catenin alpha 1 ISO protein:increased expression:breast
protein:decreased expression:breast		 RGD PMID:11431364 PMID:17223851 RGD:2289792 RGD:2289796 NCBI chr 2:140,682,776...140,869,828
Ensembl chr 2:140,682,371...140,871,334 		JBrowse link
G CTNNB1 catenin beta 1 disease_progression ISO protein:decreased expression:breast
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:12165863 PMID:16707478 PMID:17223851 PMID:25330770 RGD:2289792 RGD:2289831 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G CTU2 cytosolic thiouridylase subunit 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 6:964,551...976,881
Ensembl chr 6:964,566...976,832 		JBrowse link
G CUL5 cullin 5 ISO CTD Direct Evidence: therapeutic CTD PMID:20949323 NCBI chr 9:36,419,806...36,507,681
Ensembl chr 9:36,419,881...36,507,667 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18521742 NCBI chr14:91,516,383...91,543,857
Ensembl chr14:91,516,431...91,552,752 		JBrowse link
G CXCL2 chemokine (C-X-C motif) ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 8:70,157,253...70,159,145
Ensembl chr 8:70,157,214...70,159,138 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 PMID:17516992 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861 		JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 NCBI chr 8:71,665,541...71,670,236
Ensembl chr 8:71,663,501...71,670,271 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25753200 NCBI chr15:15,663,652...15,666,706
Ensembl chr15:15,663,494...15,667,232 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19913079 PMID:34426286 NCBI chr14:113,805,616...113,820,445
Ensembl chr14:113,805,611...113,812,041 		JBrowse link
G CYP19A3 cytochrome P450 19A3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11850205 PMID:19639193 PMID:23342035 PMID:28112739 PMID:29701941 More... NCBI chr 1:120,476,890...120,556,103
Ensembl chr 1:120,367,667...120,695,899 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16792888 NCBI chr 7:58,802,887...58,809,155
Ensembl chr 7:58,802,887...58,809,775 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 PMID:17297925 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,205,683 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16280049 NCBI chr17:55,110,546...55,130,328
Ensembl chr17:55,110,590...55,130,363 		JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19597703 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,642 		JBrowse link
G DAP3 death associated protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:94,256,460...94,298,492
Ensembl chr 4:94,262,332...94,297,223 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14604972 NCBI chr 5:22,785,441...22,789,867
Ensembl chr 5:22,785,445...22,789,829 		JBrowse link
G DEK DEK proto-oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 7:13,901,562...13,935,477
Ensembl chr 7:13,872,775...13,935,173 		JBrowse link
G DEPP1 DEPP autophagy regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr14:91,118,332...91,120,242
Ensembl chr14:91,114,441...91,122,191 		JBrowse link
G DES desmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr15:121,428,539...121,435,426
Ensembl chr15:121,427,642...121,435,423 		JBrowse link
G DHFR dihydrofolate reductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21501481 PMID:28188287 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DICER1 dicer 1, ribonuclease III ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:21266384 PMID:24728327 PMID:25741868 PMID:26467025 PMID:28492532 More... NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G DIO3 iodothyronine deiodinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770
G DKK1 dickkopf WNT signaling pathway inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18283316 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22520950 PMID:28544374 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844 		JBrowse link
G DNMT3A DNA methyltransferase 3 alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:22520950 NCBI chr 3:113,501,972...113,609,148
Ensembl chr 3:113,528,926...113,603,087 		JBrowse link
G DNMT3B DNA methyltransferase 3 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:18221536 PMID:22520950 NCBI chr17:36,345,715...36,386,076
Ensembl chr17:36,345,816...36,386,072 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19020767 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,414...120,712,459 		JBrowse link
G DSC3 desmocollin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16799634 NCBI chr 6:114,916,759...114,963,688
Ensembl chr 6:114,916,767...114,963,609 		JBrowse link
G DTX3 deltex E3 ubiquitin ligase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr 5:22,867,691...22,873,413
Ensembl chr 5:22,867,711...22,873,393 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr 9:33,720,920...34,039,954
Ensembl chr 9:33,720,877...34,040,188 		JBrowse link
G E2F1 E2F transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14672398 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,599...37,189,883 		JBrowse link
G EDNRB endothelin receptor type B ISO CTD Direct Evidence: therapeutic CTD PMID:16244791 NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884 		JBrowse link
G EEF1B2 eukaryotic translation elongation factor 1 beta 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr15:109,451,901...109,455,529
Ensembl chr15:109,451,514...109,455,525 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527 NCBI chr 2:74,746,541...74,756,687
Ensembl chr 2:74,747,080...74,756,680 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19115204 NCBI chr 3:85,407,677...85,473,251
Ensembl chr 3:85,407,677...85,473,252 		JBrowse link
G EFNA1 ephrin A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20154726 NCBI chr 4:94,666,457...94,673,442
Ensembl chr 4:94,666,460...94,674,071 		JBrowse link
G EGF epidermal growth factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16175315 PMID:21942447 PMID:23064031 NCBI chr 8:112,235,607...112,330,062
Ensembl chr 8:112,234,386...112,330,046 		JBrowse link
G EGFR epidermal growth factor receptor disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:lung, tumor (mouse)		 CTD
RGD		 PMID:16950593 PMID:18768436 PMID:19075277 PMID:20135347 PMID:20941507 More... RGD:5037225 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589 		JBrowse link
G EIF2S2 eukaryotic translation initiation factor 2 subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr17:37,551,182...37,570,269
Ensembl chr17:37,538,321...37,570,224 		JBrowse link
G EIF6 eukaryotic translation initiation factor 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr17:38,638,295...38,643,918
Ensembl chr17:38,638,298...38,643,973 		JBrowse link
G ELK3 ETS transcription factor ELK3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16583263 NCBI chr 5:87,285,237...87,355,201
Ensembl chr 5:87,285,238...87,354,208 		JBrowse link
G ELP1 elongator acetyltransferase complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 1:249,905,550...249,980,570
Ensembl chr 1:249,905,351...249,981,641 		JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr14:11,832,947...11,940,080
Ensembl chr14:11,832,962...11,940,070 		JBrowse link
G EMSY EMSY transcriptional repressor, BRCA2 interacting ISO CTD Direct Evidence: marker/mechanism CTD PMID:19636701 NCBI chr 9:10,628,053...10,715,814
Ensembl chr 9:10,628,053...10,716,396 		JBrowse link
G ENG endoglin treatment ISO RGD PMID:21431419 RGD:7257526 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G ENO1 enolase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19655245 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,879...69,401,151 		JBrowse link
G EP300 E1A binding protein p300 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26229107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760 		JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17260099 NCBI chr 6:101,420,376...101,671,177
Ensembl chr 6:101,420,396...101,671,169 		JBrowse link
G EPHB4 EPH receptor B4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23063927 NCBI chr 3:8,671,052...8,689,778
Ensembl chr 3:8,668,859...8,689,783 		JBrowse link
G EPOR erythropoietin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:19706814 NCBI chr 2:70,063,601...70,068,821
Ensembl chr 2:70,063,519...70,068,821 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 treatment
disease_progression		 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm
mRNA:increased expression:blood		 RGD
ClinVar		 PMID:15753357 PMID:16397024 PMID:16609042 PMID:16863509 PMID:16988931 More... RGD:10401078 RGD:2289921 NCBI chr12:22,591,621...22,621,384
Ensembl chr12:22,590,725...22,621,351 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 disease_progression ISO DNA:amplification
ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm		 RGD
ClinVar		 PMID:18182100 PMID:26619011 RGD:2289942 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,474,475...21,495,038 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 disease_progression
susceptibility		 ISO mRNA:increased expression:breast
DNA:amplification
DNA:polymorphism:promoter:-782G>T (human)		 RGD PMID:17465220 PMID:18094435 PMID:18182100 RGD:2289942 RGD:2289949 RGD:2289977 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit disease_progression ISO DNA:SNP:exon:p.K751Q (rs13181) (human) RGD PMID:19307510 RGD:11340203 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,320...51,757,553 		JBrowse link
G ESR1 estrogen receptor 1 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:24185510 PMID:24185512 PMID:24398047 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363 		JBrowse link
G ESR2 estrogen receptor 2 disease_progression
treatment		 ISO mRNA, protein:increased expression:breast
CTD Direct Evidence: marker/mechanism|therapeutic		 RGD
CTD		 PMID:17132221 PMID:18234277 PMID:19434490 PMID:19548127 PMID:24047421 RGD:2290017 RGD:8552984 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,829,560...193,906,565 		JBrowse link
G ESRRA estrogen related receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:20961995 NCBI chr 2:7,803,504...7,812,868
Ensembl chr 2:7,803,510...7,813,098 		JBrowse link
G ETS2 ETS proto-oncogene 2, transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr13:202,464,341...202,483,534
Ensembl chr13:202,468,405...202,484,608 		JBrowse link
G ETV4 ETS variant transcription factor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21679465 NCBI chr12:19,531,507...19,548,303
Ensembl chr12:19,531,603...19,548,301 		JBrowse link
G EVL Enah/Vasp-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 7:120,911,814...121,056,556
Ensembl chr 7:120,911,648...121,056,555 		JBrowse link
G EXO1 exonuclease 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25751625 NCBI chr10:15,317,555...15,360,593
Ensembl chr10:15,317,581...15,359,839 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:21903722 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,385,015...109,450,941 		JBrowse link
G F3 coagulation factor III, tissue factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:15562024 NCBI chr 4:122,827,018...122,837,673
Ensembl chr 4:122,826,644...122,837,666 		JBrowse link
G FABP7 fatty acid binding protein 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22322885 NCBI chr 1:39,872,198...39,876,272
Ensembl chr 1:39,871,537...39,876,397 		JBrowse link
G FASLG Fas ligand susceptibility ISO protein:increased expression:breast
DNA:polymorphism:promoter:-844T>C		 RGD PMID:10640988 PMID:17183065 RGD:2290054 RGD:2290134 NCBI chr 9:115,068,314...115,075,147
Ensembl chr 9:115,068,090...115,076,464 		JBrowse link
G FASN fatty acid synthase ISO CTD Direct Evidence: marker/mechanism CTD PMID:17089011 PMID:18281512 NCBI chr12:922,405...937,560
Ensembl chr12:920,509...937,561 		JBrowse link
G FBL fibrillarin ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 6:48,314,782...48,326,433
Ensembl chr 6:48,314,783...48,326,436 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:26619011 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,844...76,699,348 		JBrowse link
G FGD5 FYVE, RhoGEF and PH domain containing 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr13:69,594,225...69,724,051
Ensembl chr13:69,594,223...69,724,056 		JBrowse link
G FGF10 fibroblast growth factor 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18438407 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGF3 fibroblast growth factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21936542 NCBI chr 2:3,489,208...3,496,532
Ensembl chr 2:3,489,009...3,497,533 		JBrowse link
G FGF4 fibroblast growth factor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21936542 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20179196 PMID:21936542 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:17525745 PMID:18552176 PMID:22238366 PMID:23002168 PMID:23908597 More... NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:19946327 NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796 		JBrowse link
G FHIT fragile histidine triad diadenosine triphosphatase severity ISO lobular breast cancer; DNA:loss of heterozygosity::LOH within the FHIT gene in 16% of cases, significant association between LOH and reduced or negative expression
protein:decreased expression:breast:frequency increases from 0% in nonproliferative benign breast disease to 41% in invasive carcinoma		 RGD PMID:10930803 PMID:17164758 RGD:2289872 RGD:2289898 NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,392,817 		JBrowse link
G FHL2 four and a half LIM domains 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17682292 NCBI chr 3:49,389,900...49,448,459
Ensembl chr 3:49,363,555...49,467,527 		JBrowse link
G FKBPL FKBP prolyl isomerase like ISO CTD Direct Evidence: therapeutic CTD PMID:20103631 NCBI chr 7:24,172,227...24,174,553
Ensembl chr 7:24,172,238...24,173,405 		JBrowse link
G FLACC1 flagellum associated containing coiled-coil domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr15:104,950,504...104,986,350
Ensembl chr15:104,942,349...104,985,722 		JBrowse link
G FLNA filamin A ISO CTD Direct Evidence: marker/mechanism CTD PMID:26437033 NCBI chr  X:124,889,934...124,915,000
Ensembl chr  X:124,890,162...124,914,992 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 severity ISO protein:increased expression, alternative form:tumor:increased expression of soluble form, significantly correlated with VEGF expression
CTD Direct Evidence: marker/mechanism
protein:altered expression:tumor:positive expression improves survival rate after neoadjuvant chemotherapy, negative expression associated with poor prognosis		 RGD
CTD		 PMID:11857378 PMID:12910290 PMID:23146280 PMID:26124351 RGD:2289961 RGD:2289962 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,621,212...5,795,264 		JBrowse link
G FN1 fibronectin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24014025 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit ISO mRNA, protein:increased expression:breast RGD PMID:17254320 RGD:2293756 NCBI chr 2:6,430,158...6,436,173
Ensembl chr 2:6,430,153...6,436,173 		JBrowse link
G FOXA1 forkhead box A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23001124 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,249...62,479,220 		JBrowse link
G FOXC1 forkhead box C1 disease_progression ISO DNA:increased methylation:promoter
DNA, mRNA:increased methylation, decreased expression:breast		 RGD PMID:20056007 PMID:20338046 RGD:8662367 RGD:8662370 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G FOXM1 forkhead box M1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208560 NCBI chr 5:67,246,219...67,263,215
Ensembl chr 5:67,245,694...67,263,211
Ensembl chr 5:67,245,694...67,263,211 		JBrowse link
G FOXP3 forkhead box P3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17570480 NCBI chr  X:43,303,777...43,328,164
Ensembl chr  X:43,303,785...43,322,968 		JBrowse link
G FOXQ1 forkhead box Q1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27129776 NCBI chr 7:664,360...666,401
Ensembl chr 7:664,373...665,563 		JBrowse link
G FST follistatin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr16:32,806,341...32,811,382
Ensembl chr16:32,805,932...32,811,421 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23535733 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,718 		JBrowse link
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:25741868 PMID:28492532 PMID:29546405 NCBI chr 1:240,595,423...240,639,625
Ensembl chr 1:240,595,394...240,640,563 		JBrowse link
G GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:92,928,834...93,041,446
Ensembl chr 7:92,929,069...93,041,442 		JBrowse link
G GDF10 growth differentiation factor 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23180569 NCBI chr14:88,522,956...88,534,719
Ensembl chr14:88,522,948...88,534,709 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:120,067,792...120,097,305
Ensembl chr 3:120,065,973...120,097,056 		JBrowse link
G GJA1 gap junction protein alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29180066 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G GNAI2 G protein subunit alpha i2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 NCBI chr13:32,705,326...32,733,804
Ensembl chr13:32,705,321...32,733,794 		JBrowse link
G GNAS GNAS complex locus ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:1517386 PMID:1594625 PMID:1944469 PMID:2549426 PMID:3720010 More... NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021 		JBrowse link
G GPER1 G protein-coupled estrogen receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24440569 NCBI chr 3:711,427...715,982
Ensembl chr 3:712,160...715,980 		JBrowse link
G GPI glucose-6-phosphate isomerase ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 6:44,038,374...44,069,331
Ensembl chr 6:44,038,357...44,069,328 		JBrowse link
G GPNMB glycoprotein nmb ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 9:92,037,428...92,071,501
Ensembl chr 9:92,037,509...92,071,499 		JBrowse link
G GPX1 glutathione peroxidase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12810669 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,916,246...31,917,433 		JBrowse link
G GPX2 glutathione peroxidase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18056462 NCBI chr 7:89,007,636...89,011,620
Ensembl chr 7:89,007,375...89,011,620 		JBrowse link
G GPX4 glutathione peroxidase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17634480 NCBI chr 2:77,321,568...77,323,931
Ensembl chr 2:77,320,464...77,323,931 		JBrowse link
G GRB7 growth factor receptor bound protein 7 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:17426702 PMID:19075277 NCBI chr12:22,574,579...22,583,386
Ensembl chr12:22,574,584...22,582,345 		JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 1:68,052,086...68,680,448
Ensembl chr 1:68,057,538...68,679,256 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:35639300 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569 		JBrowse link
G GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 9:62,101,581...62,510,803
Ensembl chr 9:62,101,613...62,499,581 		JBrowse link
G GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) ISO CTD Direct Evidence: marker/mechanism CTD PMID:19446661 NCBI chr 7:74,705,499...74,708,781
Ensembl chr 7:74,705,409...74,708,790
Ensembl chr 7:74,705,409...74,708,790 		JBrowse link
G H1-2 H1.2 linker histone, cluster member ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 7:20,743,716...20,744,356
Ensembl chr 7:20,743,716...20,744,356 		JBrowse link
G H2AX H2A.X variant histone ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 PMID:21463514 NCBI chr 9:46,308,824...46,310,494
Ensembl chr 9:46,309,653...46,310,084 		JBrowse link
G H2BC12 H2B clustered histone 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 7:21,225,807...21,226,322 JBrowse link
G H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:29295867 NCBI chr 6:69,666,348...69,700,303
Ensembl chr 6:69,666,601...69,700,298 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,024...112,753,086 		JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:58,627,709...58,634,461
Ensembl chr 2:58,627,699...58,634,450 		JBrowse link
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:16397024 PMID:23220880 NCBI chr15:56,438,117...56,649,805
Ensembl chr15:56,438,148...56,649,792 		JBrowse link
G HES1 hes family bHLH transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20197467 PMID:21036696 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,788 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 6:95,442,655...95,459,597
Ensembl chr 6:95,442,661...95,459,575 		JBrowse link
G HHEX hematopoietically expressed homeobox ISO CTD Direct Evidence: marker/mechanism CTD PMID:16854221 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G HIC1 HIC ZBTB transcriptional repressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20154726 NCBI chr12:48,167,861...48,172,540
Ensembl chr12:48,168,900...48,172,636 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha disease_progression ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:17245699 PMID:19064988 PMID:24349381 RGD:2293195 RGD:2306224 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G HMMR hyaluronan mediated motility receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:17922014 NCBI chr16:60,290,684...60,332,411
Ensembl chr16:60,290,001...60,331,936 		JBrowse link
G HMOX1 heme oxygenase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr10:30,975,639...30,987,955
Ensembl chr10:30,975,702...30,987,956 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 6:47,643,561...47,655,856
Ensembl chr 6:47,643,566...47,657,833 		JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,196,062...81,239,406 		JBrowse link
G HOXB13 homeobox B13 disease_progression ISO CTD Direct Evidence: marker/mechanism
DNA:hypermethylation		 CTD
RGD		 PMID:17453342 PMID:19250546 PMID:24239177 RGD:2314726 RGD:2314727 NCBI chr12:24,948,307...24,950,661
Ensembl chr12:24,947,687...24,950,714 		JBrowse link
G HOXD11 homeobox D11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15818620 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HP haptoglobin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16597321 NCBI chr 6:14,980,382...14,985,245 JBrowse link
G HPSE heparanase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16391819 NCBI chr 8:135,082,199...135,120,887
Ensembl chr 8:135,097,725...135,120,887 		JBrowse link
G HRAS HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:1904555 PMID:2105486 PMID:3510078 PMID:11150980 PMID:12727991 More... NCBI chr 2:299,662...302,539
Ensembl chr 2:299,660...302,501 		JBrowse link
G HRG histidine rich glycoprotein ISO CTD Direct Evidence: marker/mechanism CTD PMID:19552798 NCBI chr13:124,505,305...124,516,387
Ensembl chr13:124,505,312...124,516,705 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20562527
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO protein:increased expression RGD PMID:20957756 RGD:5686342 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,894 		JBrowse link
G IBSP integrin binding sialoprotein ISO CTD Direct Evidence: marker/mechanism CTD PMID:24980816 NCBI chr 8:131,208,281...131,222,048
Ensembl chr 8:131,208,282...131,241,266 		JBrowse link
G ICAM5 intercellular adhesion molecule 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 2:69,111,223...69,118,170
Ensembl chr 2:69,111,309...69,118,164 		JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:18772396 PMID:19657110 PMID:19798509 PMID:19818334 PMID:20946881 More... NCBI chr15:111,341,153...111,362,330
Ensembl chr15:111,341,153...111,362,296 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,473 		JBrowse link
G IFNB1 interferon beta 1 ISO CTD Direct Evidence: therapeutic CTD PMID:18608205 NCBI chr 1:201,850,935...201,851,495
Ensembl chr 1:201,850,935...201,851,495 		JBrowse link
G IFNG interferon gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:19446661 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670 		JBrowse link
G IGBP1 immunoglobulin binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21339737 NCBI chr  X:56,173,773...56,206,121 JBrowse link
G IGF1 insulin like growth factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17520698 PMID:18398872 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21057462 NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,825...137,691,058 		JBrowse link
G IGFBP5 insulin like growth factor binding protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20354179 NCBI chr15:118,861,816...118,877,787
Ensembl chr15:118,857,625...118,878,120 		JBrowse link
G IGFBP7 insulin like growth factor binding protein 7 ISO CTD Direct Evidence: therapeutic CTD PMID:12592389 NCBI chr 8:56,283,089...56,357,822
Ensembl chr 8:56,279,895...56,357,822 		JBrowse link
G IL10 interleukin 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29582634 NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378 		JBrowse link
G IL13 interleukin 13 treatment
susceptibility		 ISO DNA:SNPs, haplotypes:promoter, exon:-1512A>C, -1055C>T, 2044G>A (human) RGD PMID:17438063 PMID:18989750 RGD:8549503 RGD:8549557 NCBI chr 2:134,972,099...134,976,672
Ensembl chr 2:134,972,623...134,975,093 		JBrowse link
G IL17A interleukin 17A treatment ISO associated with Arthritis, Experimental RGD PMID:24674692 RGD:9068440 NCBI chr 7:46,013,584...46,017,161
Ensembl chr 7:46,013,584...46,017,153 		JBrowse link
G IL2 interleukin 2 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar NCBI chr 8:101,640,938...101,645,683
Ensembl chr 8:101,640,944...101,645,609 		JBrowse link
G IL24 interleukin 24 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:16298037 PMID:21671747 NCBI chr 9:67,525,246...67,532,407
Ensembl chr 9:67,525,557...67,530,738 		JBrowse link
G IL6 interleukin 6 susceptibility ISO associated with obesity;DNA:polymorphism:promoter:-174G>C(human)
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:11426023 PMID:16298037 PMID:17516992 PMID:19435922 PMID:19446661 RGD:7829718 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G IL7R interleukin 7 receptor ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar NCBI chr16:21,300,141...21,330,156
Ensembl chr16:21,300,111...21,329,585 		JBrowse link
G ITSN2 intersectin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 NCBI chr 3:114,363,319...114,508,447
Ensembl chr 3:114,363,529...114,508,444 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr17:19,591,248...19,629,659
Ensembl chr17:19,591,259...19,629,641 		JBrowse link
G JAG2 jagged canonical Notch ligand 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO CTD Direct Evidence: marker/mechanism CTD PMID:30619488 NCBI chr12:4,809,014...4,819,853
Ensembl chr12:4,809,118...4,818,043 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636 		JBrowse link
G JUP junction plakoglobin severity
no_association		 ISO protein:increased expression:tumor, cell membrane:significantly associated with relapse-free and overall survival (p=0.029 and 0.020, respectively)
Protein::tumor:normal expression in both T1 and T2 tumors
DNA:loss of heterozygosity:tumor:in individuals carrying the BRCA1 predisposition		 RGD PMID:7604000 PMID:11276001 PMID:17008277 RGD:2291873 RGD:2291881 RGD:2291883 NCBI chr12:20,902,395...20,931,208
Ensembl chr12:20,901,396...20,931,210 		JBrowse link
G KAT6A lysine acetyltransferase 6A severity ISO mRNA:increased expression:breast (human) RGD PMID:25220592 RGD:9590335 NCBI chr17:11,002,818...11,109,974 JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17520698 NCBI chr 9:131,960,566...132,336,029
Ensembl chr 9:131,960,480...132,334,953 		JBrowse link
G KDM4C lysine demethylase 4C severity ISO human gene in a mouse model
mRNA:increased expression:breast (human)		 RGD PMID:19784073 PMID:23129632 RGD:9587479 RGD:9587482 NCBI chr 1:215,071,335...215,507,778
Ensembl chr 1:215,071,419...215,507,800 		JBrowse link
G KDM5B lysine demethylase 5B severity ISO mRNA:increased expression:breast (human) RGD PMID:10336460 RGD:9587743 NCBI chr10:24,739,115...24,831,537
Ensembl chr10:24,736,838...24,831,447 		JBrowse link
G KDR kinase insert domain receptor treatment ISO CTD Direct Evidence: marker/mechanism RGD
CTD		 PMID:14511401 PMID:20135347 PMID:35917945 RGD:8551844 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G KDSR 3-ketodihydrosphingosine reductase disease_progression ISO associated with Papillomavirus Infections;protein:increased expression:breast
CTD Direct Evidence: marker/mechanism
DNA:polymorphism:promoter:-938C>A		 RGD
CTD		 PMID:12517783 PMID:16954440 PMID:17908970 PMID:18427947 PMID:18430249 More... RGD:2292908 RGD:2292909 RGD:2293016 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase severity
disease_progression		 ISO protein:decreased expression:tumor:mean immunoreactive score = 5.90 in normal breast, 0.90 in malignant tissue (p=0.001)
protein:increased expression:tumor:significantly increased vs fibroadenoma (p=0.035)
protein:expression:tumor:expression correlated with poor overall survival (p=0.051) and with high grade (p=0.019)
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:14669790 PMID:17848740 PMID:17867595 PMID:20941507 PMID:21388062 RGD:12910741 RGD:2292423 RGD:2292424 RGD:2292425 NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,734 		JBrowse link
G KLHDC10 kelch domain containing 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr18:18,667,377...18,723,090
Ensembl chr18:18,667,365...18,723,067 		JBrowse link
G KLHDC7A kelch domain containing 7A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 6:77,022,168...77,030,776
Ensembl chr 6:77,023,865...77,026,255 		JBrowse link
G KLK10 kallikrein related peptidase 10 severity ISO CTD Direct Evidence: marker/mechanism
DNA:hypermethylation:exon (human)		 RGD
CTD		 PMID:12087468 PMID:16800735 PMID:17585892 PMID:19150938 RGD:2314845 RGD:2314847 RGD:2314850 NCBI chr 6:55,673,508...55,677,725
Ensembl chr 6:55,673,439...55,677,725 		JBrowse link
G KMT2D lysine methyltransferase 2D ISO CTD Direct Evidence: marker/mechanism CTD PMID:26437033 NCBI chr 5:15,049,827...15,091,622 JBrowse link
G KRAS KRAS proto-oncogene, GTPase ISO breast adenocarcinoma cell line, OMIM:114480 DNA:point_mutation:CDS:amino acid G13D
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:3627975 RGD:1600466 NCBI chr 5:48,508,774...48,546,260
Ensembl chr 5:48,508,811...48,549,358 		JBrowse link
G KRT18 keratin 18 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20061804 PMID:25330770 NCBI chr 5:18,217,686...18,221,432
Ensembl chr 5:18,217,691...18,221,429 		JBrowse link
G KRT5 keratin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr 5:17,862,047...17,868,397
Ensembl chr 5:17,862,051...17,868,402 		JBrowse link
G KRT8 keratin 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20061804 NCBI chr 5:18,172,423...18,180,277
Ensembl chr 5:18,167,553...18,180,404 		JBrowse link
G L3MBTL3 L3MBTL histone methyl-lysine binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 1:33,198,295...33,319,477
Ensembl chr 1:33,198,301...33,319,399 		JBrowse link
G LAMTOR5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26229107 NCBI chr 4:109,722,664...109,728,278
Ensembl chr 4:109,722,913...109,728,257 		JBrowse link
G LBX1 ladybird homeobox 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19651985 NCBI chr14:112,283,479...112,287,631
Ensembl chr14:112,284,261...112,286,216 		JBrowse link
G LDHB lactate dehydrogenase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:23437403 NCBI chr 5:51,810,932...51,831,218 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,825,161...113,944,070 		JBrowse link
G LEP leptin ISO CTD Direct Evidence: marker/mechanism CTD PMID:21353530 PMID:35191604 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323 		JBrowse link
G LGR6 leucine rich repeat containing G protein-coupled receptor 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 PMID:23535733 NCBI chr10:24,358,946...24,454,430
Ensembl chr10:24,359,774...24,454,428 		JBrowse link
G LIMD2 LIM domain containing 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18925433 NCBI chr12:15,223,798...15,229,634
Ensembl chr12:15,222,973...15,227,700 		JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr12:60,487,337...60,500,423
Ensembl chr12:60,487,343...60,500,447 		JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28114269 NCBI chr12:5,809,066...5,846,165
Ensembl chr12:5,809,069...5,846,162 		JBrowse link
G LOC100512174 butyrophilin-like protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:24,271,839...24,290,750 JBrowse link
G LOC100516084 cytoplasmic tRNA 2-thiolation protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27811057 NCBI chr 6:58,388,646...58,396,509 JBrowse link
G LOC100524391 putative methyltransferase NSUN6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28114269 NCBI chr10:44,884,179...44,958,024
Ensembl chr10:44,891,257...44,958,004 		JBrowse link
G LOC100622859 baculoviral IAP repeat-containing protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr 9:33,041,592...33,062,865
Ensembl chr 9:33,041,663...33,062,854 		JBrowse link
G LOC100737977 tumor necrosis factor receptor superfamily member 10B-like disease_progression ISO protein:increased expression:breast RGD PMID:16033835 RGD:2290494 NCBI chr14:7,344,788...7,371,086 JBrowse link
G LOC100739508 glutathione S-transferase P-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:25322848 NCBI chr 2:5,005,498...5,009,247 JBrowse link
G LOC110255312 keratin, type I cytoskeletal 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr12:21,074,965...21,079,393
Ensembl chr12:21,024,314...21,119,396 		JBrowse link
G LOC110258578 interleukin-1 beta-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 PMID:17516992 PMID:28212736
G LOXL2 lysyl oxidase like 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19330836 PMID:24014025 NCBI chr14:7,435,861...7,540,699
Ensembl chr14:7,435,867...7,540,704 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 1:251,811,583...251,979,828
Ensembl chr 1:251,811,584...251,979,159 		JBrowse link
G LRRC3B leucine rich repeat containing 3B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr13:13,327,030...13,420,216
Ensembl chr13:13,327,220...13,420,223 		JBrowse link
G LRRC56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:1904555 PMID:2105486 PMID:3510078 PMID:11150980 PMID:12727991 More... NCBI chr 2:303,836...323,701
Ensembl chr 2:304,430...323,699 		JBrowse link
G LSP1 lymphocyte specific protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17529967 PMID:20453838 NCBI chr 2:1,261,957...1,295,891
Ensembl chr 2:1,262,079...1,295,887 		JBrowse link
G MACIR macrophage immunometabolism regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 2:108,733,347...108,753,276
Ensembl chr 2:108,733,357...108,753,275 		JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 ISO RGD PMID:11423979 RGD:1599865 NCBI chr 3:1,236,066...1,559,346
Ensembl chr 3:1,236,076...1,559,041 		JBrowse link
G MAL mal, T cell differentiation protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:19208741 NCBI chr 3:46,223,610...46,242,306
Ensembl chr 3:46,181,555...46,242,047 		JBrowse link
G MAN2C1 mannosidase alpha class 2C member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:58,247,264...58,261,204
Ensembl chr 7:58,248,384...58,261,203 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 susceptibility ISO DNA:SNP, haplotype RGD PMID:19404734 RGD:7495825 NCBI chr12:56,402,029...56,516,217
Ensembl chr12:56,402,075...56,516,238 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21317887 NCBI chr 2:71,299,010...71,308,432
Ensembl chr 2:71,298,325...71,308,124 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17529967 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,872,131...35,946,987 		JBrowse link
G MCPH1 microcephalin 1 severity ISO protein:decreased expression:breast (human) RGD PMID:20632086 RGD:9589027 NCBI chr15:37,455,186...37,674,971
Ensembl chr15:37,455,551...37,673,633 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO CTD Direct Evidence: marker/mechanism CTD PMID:26229107 NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,105,759...33,137,739 		JBrowse link
G MDM4 MDM4 regulator of p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23535733 NCBI chr 9:65,175,488...65,219,747
Ensembl chr 9:65,175,377...65,219,742 		JBrowse link
G MECOM MDS1 and EVI1 complex locus ISO CTD Direct Evidence: marker/mechanism CTD PMID:23770046 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,482...108,335,702 		JBrowse link
G MED12 mediator complex subunit 12 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:26619011 NCBI chr  X:57,150,884...57,174,367
Ensembl chr  X:57,150,919...57,175,333 		JBrowse link
G MED28 mediator complex subunit 28 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21942447 NCBI chr 8:12,624,096...12,633,251
Ensembl chr 8:12,624,109...12,635,334 		JBrowse link
G MEIS1 Meis homeobox 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19776672 NCBI chr 3:75,485,024...75,625,855
Ensembl chr 3:75,485,022...75,625,040 		JBrowse link
G METTL6 methyltransferase 6, tRNA N3-cytidine ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr13:2,638,972...2,654,845
Ensembl chr13:2,638,389...2,654,836 		JBrowse link
G MFGE8 milk fat globule EGF and factor V/VIII domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:21127199 NCBI chr 7:54,539,970...54,554,885
Ensembl chr 7:54,539,970...54,571,747 		JBrowse link
G MIF macrophage migration inhibitory factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:19602265 NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,841,068 		JBrowse link
G MIR101-1 microRNA mir-101-1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24475105 NCBI chr 1:217,152,783...217,152,873
Ensembl chr 1:217,152,783...217,152,873 		JBrowse link
G MIR10A microRNA mir-10a ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr12:24,833,644...24,833,723
Ensembl chr12:24,833,627...24,833,730 		JBrowse link
G MIR10B microRNA mir-10b ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr15:81,951,644...81,951,723
Ensembl chr15:81,951,636...81,951,736 		JBrowse link
G MIR126 microRNA mir-126 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276
G MIR127 microRNA mir-127 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 7:121,709,636...121,709,715
Ensembl chr 7:121,709,640...121,709,720 		JBrowse link
G MIR132 microRNA mir-132 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr12:48,162,625...48,162,702
Ensembl chr12:48,162,614...48,162,714 		JBrowse link
G MIR145 microRNA mir-145 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21463514 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MIR152 microRNA mir-152 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28544374 NCBI chr12:24,292,249...24,292,328
Ensembl chr12:24,292,251...24,292,336 		JBrowse link
G MIR205 microRNA mir-205 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 9:133,517,078...133,517,146
Ensembl chr 9:133,517,078...133,517,146 		JBrowse link
G MIR206 microRNA mir-206 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 7:45,976,293...45,976,372
Ensembl chr 7:45,976,293...45,976,372 		JBrowse link
G MIR214 microRNA mir-214 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101 		JBrowse link
G MIR221 microRNA mir-221 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr  X:40,571,068...40,571,137
Ensembl chr  X:40,571,068...40,571,137 		JBrowse link
G MIR222 microRNA mir-222 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr  X:40,571,808...40,571,887
Ensembl chr  X:40,571,808...40,571,887 		JBrowse link
G MIR29A microRNA mir-29a ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr18:18,040,032...18,040,117
Ensembl chr18:18,040,032...18,040,118 		JBrowse link
G MIR342 microRNA mir-342 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840 		JBrowse link
G MIR345-1 microRNA mir-345-1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 7:121,193,720...121,193,799
Ensembl chr 7:121,193,716...121,193,799 		JBrowse link
G MIR489 microRNA mir-489 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20099276 NCBI chr 9:73,330,690...73,330,770
Ensembl chr 9:73,330,690...73,330,770 		JBrowse link
G MKI67 marker of proliferation Ki-67 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15706428 PMID:18768436 PMID:19436038 NCBI chr14:137,266,622...137,296,312 JBrowse link
G MME membrane metalloendopeptidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23063927 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045 		JBrowse link
G MMP1 matrix metallopeptidase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23548910 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076 		JBrowse link
G MMP13 matrix metallopeptidase 13 disease_progression ISO protein:increased expression:tumor:positive correlation with lymph node metastases (p<0.001), negative correlation with overall survival (p=0.0008) RGD PMID:18373849 RGD:2293603 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G MMP14 matrix metallopeptidase 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24014025 NCBI chr 7:76,174,502...76,185,931
Ensembl chr 7:76,172,971...76,185,928 		JBrowse link
G MMP2 matrix metallopeptidase 2 disease_progression ISO CTD Direct Evidence: marker/mechanism
DNA:SNP:promoter:-1306C>T (human)
protein:increased expression:breast
protein:decreased expression:serum		 CTD
RGD		 PMID:15538048 PMID:16949931 PMID:17642161 PMID:17851253 PMID:18398872 More... RGD:2290392 RGD:2290401 RGD:8547818 RGD:8655999 NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,595...30,086,982 		JBrowse link
G MMP3 matrix metallopeptidase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 9:33,446,969...33,453,995
Ensembl chr 9:33,446,836...33,454,000 		JBrowse link
G MMP9 matrix metallopeptidase 9 disease_progression
no_association		 ISO protein:increased expression:serum
DNA:SNPs, haplotype:rs17577, rs3787268 (human)
DNA:SNPs:promoter, CDS:rs3918241, rs2274756 (p.R668Q) (human)
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:15538048 PMID:18172859 PMID:19617202 PMID:20725776 PMID:21151179 More... RGD:2290343 RGD:8547818 RGD:8547827 RGD:8547837 RGD:8547839 RGD:8547893 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
G MRPL13 mitochondrial ribosomal protein L13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:18,608,919...18,671,523
Ensembl chr 4:18,608,883...18,671,517 		JBrowse link
G MRPL19 mitochondrial ribosomal protein L19 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 3:67,604,613...67,611,323
Ensembl chr 3:67,600,842...67,611,441 		JBrowse link
G MRPL9 mitochondrial ribosomal protein L9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:97,448,160...97,462,523
Ensembl chr 4:97,448,169...97,463,131 		JBrowse link
G MRPS22 mitochondrial ribosomal protein S22 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr13:80,006,656...80,232,107
Ensembl chr13:79,981,796...80,232,773 		JBrowse link
G MRPS23 mitochondrial ribosomal protein S23 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr12:34,123,679...34,129,574
Ensembl chr12:34,122,020...34,129,548 		JBrowse link
G MRPS28 mitochondrial ribosomal protein S28 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:56,607,666...56,706,918
Ensembl chr 4:56,607,740...56,708,823 		JBrowse link
G MRPS7 mitochondrial ribosomal protein S7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr12:6,052,109...6,055,669
Ensembl chr12:6,052,063...6,055,668 		JBrowse link
G MST1 macrophage stimulating 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28114269 NCBI chr13:32,214,934...32,220,045
Ensembl chr13:32,214,937...32,219,902 		JBrowse link
G MT3 metallothionein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21170156 NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,261...18,636,131 		JBrowse link
G MTDH metadherin ISO CTD Direct Evidence: marker/mechanism CTD PMID:19111877 NCBI chr 4:39,052,895...39,113,380
Ensembl chr 4:39,051,537...39,113,385 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16777985 PMID:17595805 PMID:28114181 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:22729223 PMID:24631838 PMID:25599672 PMID:25741868 PMID:25799227 More... NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:17595805 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor treatment ISO mRNA:increased expression:mammary gland (mouse) RGD PMID:20820192 PMID:22439659 RGD:7207428 RGD:7241009 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G MYH9 myosin heavy chain 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28650484 NCBI chr 5:11,365,603...11,456,475
Ensembl chr 5:11,360,660...11,456,472 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20332317 NCBI chr 3:113,997,214...114,251,080
Ensembl chr 3:113,999,253...114,250,298 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20332317 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,238...65,246,572 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20332317 NCBI chr17:49,528,275...49,660,471
Ensembl chr17:49,528,179...49,663,200 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19781322 NCBI chr12:59,256,868...59,392,564
Ensembl chr12:59,273,100...59,392,562 		JBrowse link
G NDRG1 N-myc downstream regulated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15341671 NCBI chr 4:8,014,445...8,069,335
Ensembl chr 4:8,014,446...8,069,335 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 2:15,031,147...15,036,880
Ensembl chr 2:15,031,149...15,036,880 		JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 ISO CTD Direct Evidence: therapeutic CTD PMID:23758976 NCBI chr 6:51,317,386...51,358,665 JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32621833 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183 		JBrowse link
G NFKBIA NFKB inhibitor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 7:64,508,119...64,510,754
Ensembl chr 7:64,507,822...64,511,277 		JBrowse link
G NISCH nischarin ISO CTD Direct Evidence: marker/mechanism CTD PMID:29912916 NCBI chr13:34,595,788...34,630,306
Ensembl chr13:34,595,782...34,630,303 		JBrowse link
G NMBR neuromedin B receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:24349381 NCBI chr 1:22,972,049...22,989,188
Ensembl chr 1:22,972,885...22,988,179 		JBrowse link
G NOP9 NOP9 nucleolar protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 7:74,985,748...74,992,108
Ensembl chr 7:74,985,753...74,992,946 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15631943 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15375496 PMID:19671875 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NOTCH1 notch receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 PMID:21679465
G NOTCH2 notch receptor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G NOTCH3 notch receptor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 NCBI chr 2:62,364,507...62,402,348
Ensembl chr 2:62,364,501...62,402,344 		JBrowse link
G NOTCH4 notch receptor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21036696 PMID:21679465 NCBI chr 7:24,231,293...24,256,281
Ensembl chr 7:24,231,293...24,256,281 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18511948 NCBI chr 6:17,292,962...17,302,593
Ensembl chr 6:17,292,770...17,302,590 		JBrowse link
G NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 7:1,792,745...1,805,916
Ensembl chr 7:1,792,876...1,806,301 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11850205 NCBI chr 2:100,447,661...100,457,510
Ensembl chr 2:100,447,705...100,457,506 		JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11850205 NCBI chr 2:60,426,116...60,438,178
Ensembl chr 2:60,426,618...60,438,177 		JBrowse link
G NRCAM neuronal cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 9:107,928,866...108,248,018
Ensembl chr 9:107,928,866...108,247,593 		JBrowse link
G NRG1 neuregulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19617202 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22267197 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,825,281...179,915,177 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24874954 NCBI chr 8:938,832...1,018,032
Ensembl chr 8:964,893...1,018,028 		JBrowse link
G NUDT17 nudix hydrolase 17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,944 		JBrowse link
G NUDT2 nudix hydrolase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20533549 NCBI chr10:32,450,986...32,466,893
Ensembl chr10:32,451,064...32,466,839 		JBrowse link
G OCLN occludin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17459053 PMID:24014025 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase severity ISO RGD PMID:24214978 RGD:9590192 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,098...57,558,515 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,209,164...36,228,073 		JBrowse link
G PAEP progestagen associated endometrial protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:22296396
G PAK1 p21 (RAC1) activated kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20179234 NCBI chr 9:11,830,095...11,973,074
Ensembl chr 9:11,830,095...12,020,415 		JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 ISO RGD PMID:22886747 RGD:7775026 NCBI chr13:133,276,122...133,383,506
Ensembl chr13:133,273,112...133,389,458 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:24033266 PMID:24136930 More... NCBI chr 3:22,586,881...22,612,837
Ensembl chr 3:22,586,856...22,612,834 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20941507 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PCBP1 poly(rC) binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35639300 NCBI chr 3:72,378,643...72,380,364
Ensembl chr 3:72,379,025...72,380,095 		JBrowse link
G PCNA proliferating cell nuclear antigen disease_progression ISO RGD PMID:8098267 RGD:2315013 NCBI chr17:14,137,746...14,142,584
Ensembl chr17:14,136,886...14,142,744 		JBrowse link
G PDE2A phosphodiesterase 2A ISO CTD Direct Evidence: marker/mechanism CTD PMID:12972520 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964 		JBrowse link
G PDGFA platelet derived growth factor subunit A ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 3:296,399...322,967
Ensembl chr 3:301,584...321,712 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO RGD PMID:17050049 RGD:2292176 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:24739482 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G PDZK1 PDZ domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25751625 NCBI chr 4:99,625,085...99,657,170
Ensembl chr 4:99,625,080...99,657,161 		JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:21890879 RGD:6771361 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293 		JBrowse link
G PER3 period circadian regulator 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20625127 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PGR progesterone receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:19436038 PMID:21501481 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221 		JBrowse link
G PHB1 prohibitin 1 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr12:25,596,520...25,609,693
Ensembl chr12:25,596,523...25,609,706 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21804546 NCBI chr 4:101,445,977...101,478,144
Ensembl chr 4:101,444,693...101,478,144 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,274,587 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 ISO mRNA:increased expression:mammary tumor (mouse) RGD PMID:17699716 RGD:4108502 NCBI chr16:46,434,757...46,523,626
Ensembl chr16:46,511,521...46,523,609 		JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 7:32,788,246...32,793,882
Ensembl chr 7:32,788,291...32,793,878 		JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19671742 PMID:19681904 PMID:32621833 NCBI chr 2:68,715,898...68,729,471
Ensembl chr 2:68,715,880...68,729,870 		JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO CTD Direct Evidence: marker/mechanism CTD PMID:21119660 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,638 		JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 ISO mRNA,protein:decreased expression:tumor:mRNA decreased and protein undetectable in HRAS transgene-induced tumors RGD PMID:9049257 RGD:2290001 NCBI chr 2:8,410,540...8,444,604
Ensembl chr 2:8,413,388...8,444,595 		JBrowse link
G PLEKHD1 pleckstrin homology and coiled-coil domain containing D1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:93,152,946...93,187,730
Ensembl chr 7:93,152,946...93,187,598 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:23709753 PMID:24033266 PMID:25741868 PMID:27146957 PMID:28466842 More... NCBI chr 3:5,118,002...5,145,634
Ensembl chr 3:5,118,018...5,145,628 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:23447401 PMID:24525744 PMID:24844595 PMID:25228659 PMID:26619011 More... NCBI chr14:22,798,146...22,852,818
Ensembl chr14:22,798,192...22,853,547 		JBrowse link
G PPARGC1B PPARG coactivator 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:20961995 NCBI chr 2:150,823,338...150,924,871
Ensembl chr 2:150,823,373...150,919,376 		JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr12:37,485,601...37,536,159
Ensembl chr12:37,485,588...37,536,146 		JBrowse link
G PPP1R12B protein phosphatase 1 regulatory subunit 12B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28650484 NCBI chr10:24,463,900...24,637,361
Ensembl chr10:24,465,041...24,637,358 		JBrowse link
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 NCBI chr 6:57,929,520...57,964,948
Ensembl chr 6:57,921,329...57,964,961 		JBrowse link
G PRC1 protein regulator of cytokinesis 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25038754 NCBI chr 7:55,869,749...55,900,640
Ensembl chr 7:55,869,821...55,900,978 		JBrowse link
G PRKCA protein kinase C alpha ISO protein:decreased expression:breast RGD PMID:9474241 PMID:15454252 PMID:17965220 RGD:2292446 RGD:2292458 RGD:2292463 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554 		JBrowse link
G PRSS46P Putative serine protease 46 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr13:29,640,448...29,665,549 JBrowse link
G PTEN phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:1336932 PMID:1945792 PMID:9140396 PMID:9241266 PMID:9259288 More... NCBI chr14:99,929,590...100,021,619 JBrowse link
G PTGES prostaglandin E synthase ISO protein:increased expression:breast RGD PMID:16353170 RGD:2300083 NCBI chr 1:269,911,785...269,924,481
Ensembl chr 1:269,911,789...269,924,462 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18488158 NCBI chr 1:262,456,106...262,482,159
Ensembl chr 1:262,456,155...262,483,035 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 susceptibility ISO CTD Direct Evidence: marker/mechanism
mRNA:decreased expression:breast
mRNA, protein:increased expression:breast		 CTD
RGD		 PMID:14605950 PMID:16127422 PMID:16870006 PMID:17285134 PMID:18334709 More... RGD:2300120 RGD:2300129 RGD:2300210 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G PTHLH parathyroid hormone like hormone ISO CTD Direct Evidence: marker/mechanism CTD PMID:22267197 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G PTK2 protein tyrosine kinase 2 ISO protein:increased expression:breast
DNA:amplification		 RGD PMID:16136050 PMID:16457699 RGD:2292558 RGD:2292559 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 1:211,832,409...214,013,013
Ensembl chr 1:213,483,348...214,009,893 		JBrowse link
G RAD50 RAD50 double strand break repair protein treatment ISO human gene in a rat model
DNA:deletion, splicing error::687delT, increased frequency in Finnish patients (8/317, p=0.008), possibly a founder mutation		 RGD PMID:11373271 PMID:16474176 RGD:2300220 RGD:9831192 NCBI chr 2:134,844,460...134,939,188
Ensembl chr 2:134,700,817...134,939,189 		JBrowse link
G RAD51 RAD51 recombinase ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 1:130,592,414...130,640,326
Ensembl chr 1:130,586,665...130,640,136 		JBrowse link
G RAD51B RAD51 paralog B ISO CTD Direct Evidence: marker/mechanism CTD PMID:19330030 NCBI chr 7:91,592,413...92,301,383
Ensembl chr 7:91,592,424...92,345,294 		JBrowse link
G RAD51C RAD51 paralog C ISO CTD Direct Evidence: marker/mechanism CTD PMID:20400964 PMID:28825726 NCBI chr12:34,975,949...35,018,112
Ensembl chr12:34,975,957...35,019,016 		JBrowse link
G RAD54L RAD54 like ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 6:165,156,833...165,184,641
Ensembl chr 6:165,152,978...165,184,776 		JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: therapeutic CTD PMID:12432273 NCBI chr13:68,581,128...68,657,911
Ensembl chr13:68,580,812...68,657,829 		JBrowse link
G RALYL RALY RNA binding protein like ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:51,785,372...52,559,659
Ensembl chr 4:51,785,380...52,558,442 		JBrowse link
G RARA retinoic acid receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:26437033 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARB retinoic acid receptor beta ISO CTD Direct Evidence: therapeutic CTD PMID:16255778 NCBI chr13:12,336,387...12,507,688
Ensembl chr13:12,336,972...12,507,680 		JBrowse link
G RB1 RB transcriptional corepressor 1 disease_progression ISO allelic loss
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:1567185 PMID:11108660 PMID:14672398 PMID:19234134 PMID:20948315 RGD:2291991 RGD:9698451 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690 		JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,324...77,649,548 		JBrowse link
G RBM3 RNA binding motif protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19734850 NCBI chr  X:42,704,019...42,707,587
Ensembl chr  X:42,704,028...42,707,577 		JBrowse link
G RBP4 retinol binding protein 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35191604 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765 		JBrowse link
G RCCD1 RCC1 domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:53,546,666...53,557,718
Ensembl chr 7:53,547,077...53,558,076 		JBrowse link
G RECQL RecQ like helicase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25915596 NCBI chr 5:51,953,460...51,995,619
Ensembl chr 5:51,953,451...52,003,740 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:16322341 PMID:16728586 PMID:20154269 RGD:2298762 RGD:2298763 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469 		JBrowse link
G REPS2 RALBP1 associated Eps domain containing 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19776672 NCBI chr  X:13,413,362...13,658,907
Ensembl chr  X:13,412,838...13,658,902 		JBrowse link
G RGS2 regulator of G protein signaling 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr10:936,836...940,083
Ensembl chr10:936,789...940,098 		JBrowse link
G RHOA ras homolog family member A ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor ClinVar PMID:26619011 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G RIBC2 RIB43A domain with coiled-coils 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 5:3,966,339...3,976,024
Ensembl chr 5:3,966,440...3,975,830 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:32,135...37,682
Ensembl chr 2:32,215...39,360 		JBrowse link
G RMND1 required for meiotic nuclear division 1 homolog ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 1:14,795,632...14,852,026
Ensembl chr 1:14,795,674...14,855,069 		JBrowse link
G RNF115 ring finger protein 115 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25751625 NCBI chr 4:99,493,172...99,577,946
Ensembl chr 4:99,493,481...99,573,564 		JBrowse link
G RNF182 ring finger protein 182 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 7:10,191,706...10,257,769
Ensembl chr 7:10,201,803...10,255,854 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:20140017 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944 		JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28114269 NCBI chr 6:148,314,575...148,834,659
Ensembl chr 6:148,315,286...148,761,524 		JBrowse link
G RPL23A ribosomal protein L23a ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr12:44,956,851...44,960,737
Ensembl chr12:44,957,142...44,960,735 		JBrowse link
G RPL31 ribosomal protein L31 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 3:53,289,993...53,295,387
Ensembl chr 3:53,281,339...53,491,733 		JBrowse link
G RPLP2 ribosomal protein lateral stalk subunit P2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:507,891...509,818
Ensembl chr 2:507,848...510,782 		JBrowse link
G RPS4X ribosomal protein S4 X-linked ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr  X:58,149,302...58,155,179
Ensembl chr  X:58,149,318...58,155,157 		JBrowse link
G RPS6 ribosomal protein S6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20197467 NCBI chr 1:203,444,360...203,447,643
Ensembl chr 1:203,444,450...203,451,468 		JBrowse link
G RPS6KB2 ribosomal protein S6 kinase B2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20953835 NCBI chr 2:5,089,466...5,095,591
Ensembl chr 2:5,089,471...5,095,575 		JBrowse link
G RPS7 ribosomal protein S7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 3:131,258,709...131,263,285
Ensembl chr 3:131,258,722...131,263,256 		JBrowse link
G RPS8 ribosomal protein S8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 6:166,550,574...166,553,289
Ensembl chr 6:166,549,949...166,553,230 		JBrowse link
G RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:17195088 NCBI chr 6:27,601,692...27,605,127
Ensembl chr 6:27,601,695...27,605,083 		JBrowse link
G RSPO3 R-spondin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17468756 NCBI chr 1:35,985,985...36,066,432
Ensembl chr 1:35,984,950...36,067,077 		JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32198086 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G RXRB retinoid X receptor beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:22322885 NCBI chr 7:25,236,005...25,242,842
Ensembl chr 7:25,236,007...25,242,875 		JBrowse link
G SERPINB2 serpin family B member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 1:157,871,919...157,886,525
Ensembl chr 1:157,872,212...157,886,602 		JBrowse link
G SERPINB5 serpin family B member 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16799634 NCBI chr 1:158,167,756...158,195,896
Ensembl chr 1:158,167,646...158,195,796 		JBrowse link
G SETBP1 SET binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25751625 NCBI chr 1:94,295,332...94,666,560
Ensembl chr 1:94,295,851...94,663,017 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:26437033 NCBI chr13:29,884,708...29,996,285
Ensembl chr13:29,884,719...29,996,359 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:23634996 PMID:26619011 NCBI chr15:101,274,968...101,338,018
Ensembl chr15:101,276,851...101,299,105 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:26619011 NCBI chr 2:6,279,039...6,295,550
Ensembl chr 2:6,279,049...6,294,639 		JBrowse link
G SFRP1 secreted frizzled related protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18283316 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SFRP2 secreted frizzled related protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18283316 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SFRP5 secreted frizzled related protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18283316 NCBI chr14:109,120,382...109,125,655
Ensembl chr14:109,119,822...109,125,686 		JBrowse link
G SHC1 SHC adaptor protein 1 ISO ClinVar Annotator: match by term: Breast neoplasm ClinVar NCBI chr 4:94,818,226...94,831,766
Ensembl chr 4:94,810,875...94,831,765 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 no_association ISO CTD Direct Evidence: marker/mechanism
DNA:SNP:CDS:no association between SNP rs1979277, rs1979276 or rs3783 and susceptibility to breast cancer		 CTD
RGD		 PMID:17311260 PMID:17595805 RGD:2300328 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SIM1 SIM bHLH transcription factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15818620 NCBI chr 1:67,213,685...67,294,455
Ensembl chr 1:67,214,337...67,294,397 		JBrowse link
G SIRT1 sirtuin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19839049 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G SLC10A6 solute carrier family 10 member 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30186172 NCBI chr 8:131,997,359...132,023,739
Ensembl chr 8:131,997,314...132,021,981 		JBrowse link
G SLC16A3 solute carrier family 16 member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22313602 NCBI chr12:796,882...807,480
Ensembl chr12:796,883...803,555 		JBrowse link
G SLC22A18 solute carrier family 22 member 18 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 2:2,032,370...2,055,756
Ensembl chr 2:2,028,396...2,055,750 		JBrowse link
G SLC28A1 solute carrier family 28 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16837820 NCBI chr 7:52,606,428...52,652,928
Ensembl chr 7:52,605,289...52,652,876 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20197467 NCBI chr 6:168,535,398...168,561,170
Ensembl chr 6:168,535,440...168,560,867 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25151356 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201 		JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19579870 NCBI chr13:109,592,595...109,614,105
Ensembl chr13:109,587,258...109,638,510 		JBrowse link
G SLC2A5 solute carrier family 2 member 5 ISO CTD Direct Evidence: therapeutic CTD PMID:15449313 NCBI chr 6:69,507,829...69,535,794
Ensembl chr 6:69,507,830...69,535,371 		JBrowse link
G SLC39A6 solute carrier family 39 member 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12839489 NCBI chr 6:119,861,853...119,885,836
Ensembl chr 6:119,861,846...119,885,378 		JBrowse link
G SLC5A5 solute carrier family 5 member 5 ISO CTD Direct Evidence: therapeutic CTD PMID:12489024 NCBI chr 2:59,869,157...59,885,086
Ensembl chr 2:59,869,155...59,885,266 		JBrowse link
G SMAD4 SMAD family member 4 ISO ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm ClinVar PMID:8898652 PMID:9214508 PMID:9285566 PMID:9582123 PMID:9679244 More... NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11850205 PMID:24014025 NCBI chr17:51,546,446...51,552,498
Ensembl chr17:51,546,477...51,552,499 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11850205 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
G SNCG synuclein gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:20595634 NCBI chr14:87,916,353...87,922,111
Ensembl chr14:87,904,659...87,922,095 		JBrowse link
G SNX32 sorting nexin 32 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 2:6,474,788...6,488,738
Ensembl chr 2:6,475,024...6,488,657 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO DNA:hypermethylation RGD PMID:15361843 RGD:2298907 NCBI chr 3:31,879,143...31,883,041
Ensembl chr 3:31,881,225...31,884,967 		JBrowse link
G SOD2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism RGD
CTD		 PMID:15168344 PMID:17965603 PMID:19385967 PMID:19756960 PMID:20562527 RGD:1581248 NCBI chr 1:7,679,352...7,689,564
Ensembl chr 1:7,679,352...7,689,560 		JBrowse link
G SPATA18 spermatogenesis associated 18 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 8:39,163,001...39,206,217
Ensembl chr 8:39,163,088...39,203,956 		JBrowse link
G SPP1 secreted phosphoprotein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18949741 PMID:22531848 NCBI chr 8:131,077,786...131,085,334
Ensembl chr 8:131,077,786...131,085,340 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase disease_progression ISO protein:altered localization:cytoplasm
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:19830888 PMID:21357651 RGD:2315076 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30394316 NCBI chr 5:6,719,484...6,784,724
Ensembl chr 5:6,719,490...6,784,671 		JBrowse link
G ST14 ST14 transmembrane serine protease matriptase disease_progression ISO protein:increased expression:breast RGD PMID:17163404 RGD:2315089 NCBI chr 9:56,888,246...56,929,771
Ensembl chr 9:56,888,246...56,929,767 		JBrowse link
G STARD8 StAR related lipid transfer domain containing 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr  X:54,773,189...54,856,716
Ensembl chr  X:54,773,171...54,856,711 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14975756 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,992 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A ISO protein:altered localization:nucleus
CTD Direct Evidence: marker/mechanism
protein:decreased expression:breast		 RGD
CTD		 PMID:15609129 PMID:16133357 RGD:2291930 RGD:2291932 NCBI chr12:20,474,221...20,498,785
Ensembl chr12:20,474,227...20,499,138 		JBrowse link
G STC2 stanniocalcin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18492817 NCBI chr16:50,989,676...51,001,412
Ensembl chr16:50,989,433...51,004,481 		JBrowse link
G STMN1 stathmin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr 6:83,356,404...83,362,546
Ensembl chr 6:83,356,412...83,362,500 		JBrowse link
G STXBP4 syntaxin binding protein 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr12:31,277,116...31,478,828
Ensembl chr12:31,277,487...31,472,792 		JBrowse link
G SYNE1 spectrin repeat containing nuclear envelope protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18507500 NCBI chr 1:13,715,644...14,201,711 JBrowse link
G SYNJ2 synaptojanin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 1:9,014,206...9,109,050
Ensembl chr 1:9,014,551...9,109,103 		JBrowse link
G TAFA4 TAFA chemokine like family member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15818620 NCBI chr13:50,142,679...50,353,448
Ensembl chr13:50,142,700...50,353,424 		JBrowse link
G TANK TRAF family member associated NFKB activator ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr15:67,970,972...68,048,681
Ensembl chr15:67,952,173...68,048,963 		JBrowse link
G TBX3 T-box transcription factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21098263 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TCL1B TCL1 family AKT coactivator B ISO CTD Direct Evidence: marker/mechanism CTD PMID:20228224 NCBI chr 7:116,912,974...116,917,940
Ensembl chr 7:116,912,976...116,917,934 		JBrowse link
G TERT telomerase reverse transcriptase disease_progression
susceptibility		 ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:breast
DNA:SNPs:promoter:-1381C>T,-659G>A,-244C>T (human)
mRNA:increased expression:plasma		 CTD
RGD		 PMID:14654933 PMID:17616810 PMID:17848914 PMID:17974999 PMID:23535731 RGD:2291969 RGD:2291981 RGD:2291983 RGD:2291987 NCBI chr16:79,258,591...79,276,421
Ensembl chr16:79,258,591...79,276,421 		JBrowse link
G TFAP2A transcription factor AP-2 alpha ISO CTD Direct Evidence: therapeutic CTD PMID:16204029 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TFF1 trefoil factor 1 disease_progression ISO protein:increased expression:breast RGD PMID:16267614 RGD:2292002 NCBI chr13:205,687,558...205,691,512
Ensembl chr13:205,687,560...205,691,460 		JBrowse link
G TFPI2 tissue factor pathway inhibitor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr 9:73,684,236...73,694,663
Ensembl chr 9:73,673,535...73,689,095 		JBrowse link
G TFRC transferrin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16904380 PMID:19238537 NCBI chr13:133,976,765...133,997,554
Ensembl chr13:133,970,985...134,000,276 		JBrowse link
G TGM2 transglutaminase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19579870 NCBI chr17:41,186,765...41,221,686
Ensembl chr17:41,186,770...41,221,637 		JBrowse link
G THBS1 thrombospondin 1 ISO CTD Direct Evidence: therapeutic CTD PMID:9309585 NCBI chr 1:131,728,781...131,746,098
Ensembl chr 1:131,728,784...131,746,115 		JBrowse link
G THEMIS2 thymocyte selection associated family member 2 ISO CTD Direct Evidence: therapeutic CTD PMID:19942713 NCBI chr 6:85,010,879...85,027,934
Ensembl chr 6:85,011,035...85,027,902 		JBrowse link
G TIMP2 TIMP metallopeptidase inhibitor 2 ISO protein:decreased expression:breast
protein:decreased expression:serum		 RGD PMID:17240786 PMID:17642161 RGD:2290392 RGD:2290398 NCBI chr12:3,254,794...3,300,835
Ensembl chr12:3,254,493...3,300,834 		JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:9190892 RGD:2290455 NCBI chr13:68,179,803...68,191,199
Ensembl chr13:68,179,806...68,190,942 		JBrowse link
G TLE3 TLE family member 3, transcriptional corepressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:19075277 NCBI chr 1:167,808,508...167,855,913
Ensembl chr 1:167,808,510...167,855,911 		JBrowse link
G TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 ISO DNA:hypermethylation:promoter RGD PMID:16234815 RGD:2290489 NCBI chr15:96,594,901...96,856,848
Ensembl chr15:96,594,970...96,855,743 		JBrowse link
G TMEM25 transmembrane protein 25 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19776672 NCBI chr 9:45,834,197...45,838,978
Ensembl chr 9:45,829,196...45,838,972 		JBrowse link
G TNF tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 PMID:17516992 PMID:19446661 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
G TNFSF10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:18483385 NCBI chr13:111,021,952...111,103,060
Ensembl chr13:110,983,298...111,038,324 		JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16298037 NCBI chr16:71,926,038...71,979,969
Ensembl chr16:71,926,133...71,979,966 		JBrowse link
G TOP2A DNA topoisomerase II alpha disease_progression ISO DNA:amplification, deletion (human)
DNA:deletion (human)
CTD Direct Evidence: marker/mechanism		 RGD
CTD		 PMID:11583189 PMID:12006526 PMID:16234514 PMID:18465341 PMID:18702822 More... RGD:2315120 RGD:2315127 RGD:2315129 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,282...22,028,450 		JBrowse link
G TOX3 TOX high mobility group box family member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17529967 NCBI chr 6:32,492,686...32,609,923
Ensembl chr 6:32,494,236...32,609,926 		JBrowse link
G TP53 tumor protein p53 susceptibility ISO DNA:missense mutation: :p.R72P
ClinVar Annotator: match by term: Breast Neoplasms | ClinVar Annotator: match by term: Breast neoplasm | ClinVar Annotator: match by term: Breast tumor		 RGD
ClinVar		 PMID:1349175 PMID:1359493 PMID:1565143 PMID:1565144 PMID:1569604 More... RGD:2290534 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD		 PMID:12374701 PMID:30705370 RGD:2325153 NCBI chr 1:127,958,500...128,032,370
Ensembl chr 1:127,959,213...128,028,712 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28650484 NCBI chr10:19,823,932...19,889,883
Ensembl chr10:19,823,936...19,889,869 		JBrowse link
G TP63 tumor protein p63 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25739959 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068 		JBrowse link
G TP73 tumor protein p73 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28212736 NCBI chr 6:65,169,770...65,228,997
Ensembl chr 6:65,182,456...65,228,990 		JBrowse link
G TRERF1 transcriptional regulating factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19075277 NCBI chr 7:37,333,379...37,555,299
Ensembl chr 7:37,333,947...37,554,570 		JBrowse link
G TRIM47 tripartite motif containing 47 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31981573 NCBI chr12:5,535,259...5,539,721
Ensembl chr12:5,535,236...5,539,715 		JBrowse link
G TRMT11 tRNA methyltransferase 11 homolog ISO CTD Direct Evidence: marker/mechanism CTD PMID:30705370 NCBI chr 1:36,930,857...37,002,079
Ensembl chr 1:36,940,334...37,002,056 		JBrowse link
G TXN thioredoxin ISO CTD Direct Evidence: marker/mechanism CTD PMID:30396169 NCBI chr 1:251,264,180...251,278,000
Ensembl chr 1:251,263,175...251,277,988 		JBrowse link
G TYMS thymidylate synthetase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16723031 PMID:19020767 PMID:21501481 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578 		JBrowse link
G UBD ubiquitin D ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr 7:22,501,130...22,502,883
Ensembl chr 7:22,501,130...22,503,094 		JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17659439 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534 		JBrowse link
G UBLCP1 ubiquitin like domain containing CTD phosphatase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29915430 NCBI chr16:64,182,918...64,205,684
Ensembl chr16:64,178,941...64,205,675 		JBrowse link
G UMPS uridine monophosphate synthetase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19020767 PMID:19151563 NCBI chr13:135,611,857...135,650,656
Ensembl chr13:135,610,058...135,650,603 		JBrowse link
G UPK1B uroplakin 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:25330770 NCBI chr13:141,013,953...141,026,368
Ensembl chr13:141,013,103...141,038,902 		JBrowse link
G VDR vitamin D receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16280049 PMID:22892281 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,266,475 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO protein:increased expression:breast RGD PMID:19567820 PMID:19722158 RGD:2315457 RGD:2315461 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
G VEGFB vascular endothelial growth factor B ISO CTD Direct Evidence: marker/mechanism CTD PMID:23146280 NCBI chr 2:7,872,873...7,876,149
Ensembl chr 2:7,872,870...7,876,118 		JBrowse link
G VEGFC vascular endothelial growth factor C ISO CTD Direct Evidence: marker/mechanism CTD PMID:18509974 PMID:26124351 NCBI chr15:39,037,764...39,136,234
Ensembl chr15:39,039,311...39,132,936 		JBrowse link
G VIM vimentin ISO CTD Direct Evidence: marker/mechanism CTD PMID:21501481 PMID:24014025 PMID:25330770 PMID:27811057 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G VPS39 VPS39 subunit of HOPS complex ISO CTD Direct Evidence: marker/mechanism CTD PMID:21466612 NCBI chr 1:129,144,338...129,198,760
Ensembl chr 1:129,144,344...129,198,761 		JBrowse link
G WNT10B Wnt family member 10B ISO CTD Direct Evidence: marker/mechanism CTD PMID:12437293 NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,003,567 		JBrowse link
G WT1 WT1 transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:14961577 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
G WWOX WW domain containing oxidoreductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:17200365 NCBI chr 6:8,910,209...9,871,048
Ensembl chr 6:8,910,138...9,871,053 		JBrowse link
G XPO1 exportin 1 ISO ClinVar Annotator: match by term: Breast Neoplasms ClinVar PMID:26619011 NCBI chr 3:80,255,016...80,300,260
Ensembl chr 3:80,255,146...80,300,327 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 disease_progression
susceptibility
no_association		 ISO DNA:polymorphism
DNA:polymorphism:intron:IVS10+141G>A
DNA:polymorphisms: :p.R194W, p.R399Q
DNA:polymorphism: :p.R399Q		 RGD PMID:16596326 PMID:16963196 PMID:17381415 PMID:19051060 RGD:2302566 RGD:2302573 RGD:2302574 RGD:2302575 NCBI chr 6:50,403,691...50,425,730
Ensembl chr 6:50,403,689...50,425,729 		JBrowse link
G