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ONTOLOGY REPORT - ANNOTATIONS


Term:Colorectal Neoplasms
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Accession:DOID:9008443 term browser browse the term
Definition:Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.
Synonyms:exact_synonym: COLORECTAL ADENOMA AND CANCER, SUSCEPTIBILITY TO;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 1;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 11;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 12;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 2;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 3;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 5;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 6;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 7;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 8;   COLORECTAL CANCER, SUSCEPTIBILITY TO, 9;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 11;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 14q;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 16q;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 18;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 20p;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 8q23;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 8q24;   COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 9;   CRC;   CRCS1;   CRCS11;   CRCS12;   CRCS2;   CRCS3;   CRCS5;   CRCS6;   CRCS7;   CRCS8;   CRCS9;   Colorectal Cancer, Susceptibility To;   Colorectal Tumors;   colorectal neoplasm;   colorectal tumor
 narrow_synonym: COLORECTAL CANCER 1;   COLORECTAL CANCER WITH CHROMOSOMAL INSTABILITY
 related_synonym: Colorectal cancer, increased risk, assoc. with
 primary_id: MESH:D015179
 alt_id: OMIM:114500;   OMIM:608812;   OMIM:611469;   OMIM:612229;   OMIM:612230;   OMIM:612231;   OMIM:612232;   OMIM:612589;   OMIM:612590;   OMIM:612592;   OMIM:615083;   RDO:0002658
For additional species annotation, visit the Alliance of Genome Resources.


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Colorectal Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCA1 ATP binding cassette subfamily A member 1 JBrowse link 9 104,781,006 104,928,232 RGD:11554173
G ABCA10 ATP binding cassette subfamily A member 10 JBrowse link 17 69,148,007 69,244,815 RGD:11554173
G ABCA12 ATP binding cassette subfamily A member 12 JBrowse link 2 214,931,542 215,138,626 RGD:11554173
G ABCA13 ATP binding cassette subfamily A member 13 JBrowse link 7 48,171,424 48,647,497 RGD:11554173
G ABCA3 ATP binding cassette subfamily A member 3 JBrowse link 16 2,275,881 2,340,728 RGD:11554173
G ABCA4 ATP binding cassette subfamily A member 4 JBrowse link 1 93,992,834 94,121,148 RGD:11554173
G ABCA5 ATP binding cassette subfamily A member 5 JBrowse link 17 69,244,311 69,327,133 RGD:11554173
G ABCA6 ATP binding cassette subfamily A member 6 JBrowse link 17 69,062,044 69,141,927 RGD:11554173
G ABCA8 ATP binding cassette subfamily A member 8 JBrowse link 17 68,867,285 68,955,426 RGD:11554173
G ABCA9 ATP binding cassette subfamily A member 9 JBrowse link 17 68,974,488 69,078,978 RGD:11554173
G ABCB1 ATP binding cassette subfamily B member 1 JBrowse link 7 87,503,017 87,713,323 RGD:11554173
G ABCB10 ATP binding cassette subfamily B member 10 JBrowse link 1 229,516,582 229,558,988 RGD:11554173
G ABCB11 ATP binding cassette subfamily B member 11 JBrowse link 2 168,915,468 169,031,396 RGD:11554173
G ABCB4 ATP binding cassette subfamily B member 4 JBrowse link 7 87,398,988 87,476,722 RGD:11554173
G ABCB5 ATP binding cassette subfamily B member 5 JBrowse link 7 20,615,667 20,757,008 RGD:11554173
G ABCB6 ATP binding cassette subfamily B member 6 (Langereis blood group) JBrowse link 2 219,209,772 219,218,958 RGD:11554173
G ABCC1 ATP binding cassette subfamily C member 1 JBrowse link 16 15,949,616 16,143,062 RGD:11554173
G ABCC13 ATP binding cassette subfamily C member 13 (pseudogene) JBrowse link 21 14,273,799 14,301,386 RGD:11554173
G ABCC2 ATP binding cassette subfamily C member 2 JBrowse link 10 99,782,602 99,853,741 RGD:11554173
G ABCC3 ATP binding cassette subfamily C member 3 JBrowse link 17 50,634,881 50,692,253 RGD:11554173
G ABCC4 ATP binding cassette subfamily C member 4 JBrowse link 13 95,019,829 95,301,451 RGD:11554173
G ABCC5 ATP binding cassette subfamily C member 5 JBrowse link 3 183,919,934 184,018,010 RGD:11554173
G ABCC6 ATP binding cassette subfamily C member 6 JBrowse link 16 16,149,565 16,223,617 RGD:11554173
G ABCC8 ATP binding cassette subfamily C member 8 JBrowse link 11 17,392,498 17,476,849 RGD:11554173
G ABCD2 ATP binding cassette subfamily D member 2 JBrowse link 12 39,530,965 39,651,333 RGD:11554173
G ABCD3 ATP binding cassette subfamily D member 3 JBrowse link 1 94,418,086 94,518,663 RGD:11554173
G ABCD4 ATP binding cassette subfamily D member 4 JBrowse link 14 74,285,269 74,303,062 RGD:11554173
G ABCE1 ATP binding cassette subfamily E member 1 JBrowse link 4 145,098,311 145,129,524 RGD:11041887
RGD:11554173
G ABCG1 ATP binding cassette subfamily G member 1 JBrowse link 21 42,199,689 42,304,387 RGD:11554173
G ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) JBrowse link 4 88,090,264 88,231,626 RGD:11554173
G ACKR3 atypical chemokine receptor 3 JBrowse link 2 236,537,131 236,582,358 RGD:11554173
G ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide JBrowse link 4 99,304,971 99,321,401 RGD:11554173
G AKAP9 A-kinase anchoring protein 9 JBrowse link 7 91,940,862 92,112,908 RGD:8554872
G AKR1B10 aldo-keto reductase family 1 member B10 JBrowse link 7 134,527,567 134,541,412 RGD:11554173
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:2313763
RGD:8554872
RGD:7240710
G AKT2 AKT serine/threonine kinase 2 JBrowse link 19 40,230,317 40,285,531 RGD:8554872
G ALB albumin JBrowse link 4 73,404,287 73,421,482 RGD:11035272
G ALDH2 aldehyde dehydrogenase 2 family member JBrowse link 12 111,766,933 111,817,532 RGD:11554173
G AMACR alpha-methylacyl-CoA racemase JBrowse link 5 33,986,165 34,008,050 RGD:11554173
G AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1 JBrowse link 17 64,966,550 64,975,585 RGD:11554173
G ANP32A acidic nuclear phosphoprotein 32 family member A JBrowse link 15 68,778,535 68,820,895 RGD:11554173
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:2293188
RGD:8554872
RGD:11554173
RGD:7240710
RGD:1331525
G APC2 APC regulator of WNT signaling pathway 2 JBrowse link 19 1,446,268 1,473,244 RGD:11554173
G ARID1A AT-rich interaction domain 1A JBrowse link 1 26,696,015 26,782,104 RGD:11554173
G ARNT aryl hydrocarbon receptor nuclear translocator JBrowse link 1 150,809,713 150,876,737 RGD:11554173
G ATP7B ATPase copper transporting beta JBrowse link 13 51,932,669 52,012,130 RGD:11554173
G AURKA aurora kinase A JBrowse link 20 56,369,389 56,392,337 RGD:7240710
RGD:11554173
G AXIN1 axin 1 JBrowse link 16 287,440 355,226 RGD:2293188
G AXIN2 axin 2 JBrowse link 17 65,528,563 65,561,648 RGD:2293188
RGD:7240710
G B2M beta-2-microglobulin JBrowse link 15 44,711,492 44,718,877 RGD:8554872
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:7240710
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:11554173
G BIRC5 baculoviral IAP repeat containing 5 JBrowse link 17 78,214,253 78,225,635 RGD:11554173
G BMP2 bone morphogenetic protein 2 JBrowse link 20 6,767,686 6,780,246 RGD:11554173
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:11554173
G BOC BOC cell adhesion associated, oncogene regulated JBrowse link 3 113,211,003 113,287,463 RGD:11554173
G BOLL boule homolog, RNA binding protein JBrowse link 2 197,726,879 197,786,312 RGD:11554173
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:2298531
RGD:8554872
RGD:11554173
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 2 110,637,528 110,678,107 RGD:8554872
RGD:7240710
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 15 40,161,009 40,221,136 RGD:7240710
G CABLES1 Cdk5 and Abl enzyme substrate 1 JBrowse link 18 23,134,564 23,260,470 RGD:11554173
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 18 24,138,956 24,161,600 RGD:11554173
G CACUL1 CDK2 associated cullin domain 1 JBrowse link 10 118,676,411 118,754,970 RGD:11554173
G CALCOCO2 calcium binding and coiled-coil domain 2 JBrowse link 17 48,831,035 48,865,245 RGD:11554173
G CALR calreticulin JBrowse link 19 12,938,600 12,944,490 RGD:11554173
G CASP8 caspase 8 JBrowse link 2 201,233,443 201,287,711 RGD:11554173
G CBX5 chromobox 5 JBrowse link 12 54,230,942 54,280,122 RGD:11554173
G CCL20 C-C motif chemokine ligand 20 JBrowse link 2 227,813,842 227,817,556 RGD:7483600
G CCND1 cyclin D1 JBrowse link 11 69,641,156 69,654,474 RGD:7240710
RGD:8554872
G CCND2 cyclin D2 JBrowse link 12 4,273,762 4,305,353 RGD:11554173
G CD109 CD109 molecule JBrowse link 6 73,696,085 73,828,317 RGD:11554173
G CD226 CD226 molecule JBrowse link 18 69,853,274 69,962,086 RGD:11554173
G CD9 CD9 molecule JBrowse link 12 6,199,946 6,238,266 RGD:11554173
G CDH1 cadherin 1 JBrowse link 16 68,737,292 68,835,537 RGD:11554173
G CDH22 cadherin 22 JBrowse link 20 46,173,733 46,308,498 RGD:11554173
G CDH5 cadherin 5 JBrowse link 16 66,366,657 66,404,784 RGD:11554173
G CDH7 cadherin 7 JBrowse link 18 65,750,252 65,890,337 RGD:11554173
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,967,752 21,995,324 RGD:8554872
G CEBPA-DT CEBPA divergent transcript JBrowse link 19 33,302,821 33,305,057 RGD:11554173
G CFTR CF transmembrane conductance regulator JBrowse link 7 117,480,025 117,668,665 RGD:11554173
G CHD1 chromodomain helicase DNA binding protein 1 JBrowse link 5 98,855,204 98,929,772 RGD:11554173
G CHD5 chromodomain helicase DNA binding protein 5 JBrowse link 1 6,101,787 6,180,321 RGD:11554173
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:11554173
RGD:8554872
G CNPPD1 cyclin Pas1/PHO80 domain containing 1 JBrowse link 2 219,171,897 219,179,272 RGD:11554173
G COL7A1 collagen type VII alpha 1 chain JBrowse link 3 48,564,073 48,595,302 RGD:11554173
G CPAMD8 C3 and PZP like alpha-2-macroglobulin domain containing 8 JBrowse link 19 16,892,951 17,026,818 RGD:11554173
G CREBBP CREB binding protein JBrowse link 16 3,725,054 3,880,727 RGD:8554872
G CSF2 colony stimulating factor 2 JBrowse link 5 132,073,789 132,076,170 RGD:11554173
G CTBP1 C-terminal binding protein 1 JBrowse link 4 1,211,444 1,253,919 RGD:11554173
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:2293188
RGD:11554173
RGD:7240710
RGD:8554872
G CXCL8 C-X-C motif chemokine ligand 8 JBrowse link 4 73,740,569 73,743,716 RGD:11554173
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 JBrowse link 15 74,748,845 74,756,607 RGD:11554173
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 JBrowse link 2 38,067,603 38,076,181 RGD:11554173
G CYP2A6 cytochrome P450 family 2 subfamily A member 6 JBrowse link 19 40,843,541 40,850,447 RGD:11554173
G DACT1 dishevelled binding antagonist of beta catenin 1 JBrowse link 14 58,634,061 58,648,321 RGD:11554173
G DCC DCC netrin 1 receptor JBrowse link 18 52,340,172 53,535,899 RGD:7240710
RGD:11554173
G DCLK1 doublecortin like kinase 1 JBrowse link 13 35,768,652 36,131,939 RGD:11554173
G DHFR dihydrofolate reductase JBrowse link 5 80,626,226 80,654,983 RGD:11554173
G DLC1 DLC1 Rho GTPase activating protein JBrowse link 8 13,083,361 13,604,620 RGD:7240710
G DNMT1 DNA methyltransferase 1 JBrowse link 19 10,133,346 10,194,953 RGD:9588299
G DNMT3B DNA methyltransferase 3 beta JBrowse link 20 32,762,385 32,809,356 RGD:9589079
RGD:9589147
G DONSON downstream neighbor of SON JBrowse link 21 33,577,551 33,588,684 RGD:11554173
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 JBrowse link 11 119,096,505 119,101,884 RGD:11554173
G DPYD dihydropyrimidine dehydrogenase JBrowse link 1 97,077,743 97,921,059 RGD:11554173
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 JBrowse link 2 55,865,967 55,924,163 RGD:11554173
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:8554872
RGD:11554173
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,879,759 31,897,698 RGD:9589147
G EIF3H eukaryotic translation initiation factor 3 subunit H JBrowse link 8 116,642,130 116,755,823 RGD:11554173
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:7240710
G EPHA1 EPH receptor A1 JBrowse link 7 143,390,813 143,408,865 RGD:11554173
G EPHB2 EPH receptor B2 JBrowse link 1 22,710,770 22,921,500 RGD:8554872
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 17 39,688,084 39,728,662 RGD:8554872
G ERBB3 erb-b2 receptor tyrosine kinase 3 JBrowse link 12 56,080,025 56,103,507 RGD:8554872
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 45,407,334 45,451,547 RGD:13207315
RGD:13207423
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 19 45,349,837 45,370,647 RGD:11554173
G ESR2 estrogen receptor 2 JBrowse link 14 64,226,707 64,338,631 RGD:11554173
G ETV1 ETS variant transcription factor 1 JBrowse link 7 13,891,229 13,991,425 RGD:11554173
G EVL Enah/Vasp-like JBrowse link 14 99,971,422 100,144,236 RGD:11554173
G EXO1 exonuclease 1 JBrowse link 1 241,847,967 241,889,939 RGD:11554173
G EYA4 EYA transcriptional coactivator and phosphatase 4 JBrowse link 6 133,240,340 133,532,128 RGD:11554173
G F7 coagulation factor VII JBrowse link 13 113,105,773 113,120,685 RGD:11049522
G FADS1 fatty acid desaturase 1 JBrowse link 11 61,799,627 61,817,003 RGD:11554173
G FADS2 fatty acid desaturase 2 JBrowse link 11 61,816,203 61,867,354 RGD:11554173
G FAT1 FAT atypical cadherin 1 JBrowse link 4 186,587,789 186,726,696 RGD:11554173
G FBLN2 fibulin 2 JBrowse link 3 13,549,125 13,638,408 RGD:11554173
G FBN2 fibrillin 2 JBrowse link 5 128,257,909 128,538,245 RGD:11554173
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:8554872
G FEN1 flap structure-specific endonuclease 1 JBrowse link 11 61,792,911 61,797,238 RGD:11554173
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:7240710
G FHL3 four and a half LIM domains 3 JBrowse link 1 37,996,765 38,005,691 RGD:11554173
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:7240710
G FLNC filamin C JBrowse link 7 128,830,406 128,859,274 RGD:11554173
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:13210756
RGD:13210758
G FOXL2 forkhead box L2 JBrowse link 3 138,944,224 138,947,137 RGD:11554173
G FPGS folylpolyglutamate synthase JBrowse link 9 127,802,858 127,814,520 RGD:11554173
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 9 98,807,670 98,850,081 RGD:8554872
RGD:11554173
RGD:7240710
G GAPDH glyceraldehyde-3-phosphate dehydrogenase JBrowse link 12 6,534,517 6,538,371 RGD:11554173
G GATA4 GATA binding protein 4 JBrowse link 8 11,676,931 11,760,002 RGD:11554173
G GATA5 GATA binding protein 5 JBrowse link 20 62,463,497 62,475,995 RGD:11554173
G GGH gamma-glutamyl hydrolase JBrowse link 8 63,015,079 63,038,806 RGD:11554173
G GNAS GNAS complex locus JBrowse link 20 58,839,681 58,911,196 RGD:8554872
G GNB4 G protein subunit beta 4 JBrowse link 3 179,396,088 179,451,470 RGD:11554173
G GNB5 G protein subunit beta 5 JBrowse link 15 52,115,100 52,191,392 RGD:11554173
G GPNMB glycoprotein nmb JBrowse link 7 23,246,766 23,275,110 RGD:11554173
G GPX4 glutathione peroxidase 4 JBrowse link 19 1,103,994 1,106,779 RGD:11554173
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 32,718,004 32,745,106 RGD:11554173
G GRID1 glutamate ionotropic receptor delta type subunit 1 JBrowse link 10 85,599,552 86,366,795 RGD:11554173
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 16 9,753,404 10,182,928 RGD:11554173
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:12798517
RGD:11554173
RGD:12798518
G GSTM3 glutathione S-transferase mu 3 JBrowse link 1 109,733,932 109,741,038 RGD:11554173
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:8554872
G GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 JBrowse link 11 106,674,019 107,018,476 RGD:11554173
G GUCY2C guanylate cyclase 2C JBrowse link 12 14,612,632 14,696,625 RGD:11554173
G HAPLN1 hyaluronan and proteoglycan link protein 1 JBrowse link 5 83,637,805 83,721,210 RGD:11554173
G HHIP hedgehog interacting protein JBrowse link 4 144,646,154 144,745,271 RGD:11554173
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 12 54,280,726 54,287,087 RGD:9999439
G HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 JBrowse link 5 179,614,178 179,634,784 RGD:9999439
G HOXD1 homeobox D1 JBrowse link 2 176,188,668 176,190,907 RGD:11554173
G HOXD9 homeobox D9 JBrowse link 2 176,122,719 176,124,937 RGD:11554173
G HRAS HRas proto-oncogene, GTPase JBrowse link 11 532,242 535,576 RGD:8554872
G ICAM5 intercellular adhesion molecule 5 JBrowse link 19 10,289,351 10,296,778 RGD:11554173
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 2 208,236,227 208,255,143 RGD:8554872
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 15 90,083,045 90,102,554 RGD:8554872
G IFNA1 interferon alpha 1 JBrowse link 9 21,440,439 21,441,316 RGD:11554173
G IFNA2 interferon alpha 2 JBrowse link 9 21,384,255 21,385,398 RGD:11554173
G IGF2 insulin like growth factor 2 JBrowse link 11 2,129,112 2,149,603 RGD:11554173
G IGFBP3 insulin like growth factor binding protein 3 JBrowse link 7 45,912,245 45,921,272 RGD:11554173
G IL6ST interleukin 6 signal transducer JBrowse link 5 55,935,095 55,994,963 RGD:11554173
G ING4 inhibitor of growth family member 4 JBrowse link 12 6,650,301 6,663,143 RGD:11554173
G IPP intracisternal A particle-promoted polypeptide JBrowse link 1 45,694,324 45,750,813 RGD:11554173
G JPH3 junctophilin 3 JBrowse link 16 87,601,835 87,698,156 RGD:11554173
G KDM2A lysine demethylase 2A JBrowse link 11 67,119,263 67,258,082 RGD:11554173
G KDM4B lysine demethylase 4B JBrowse link 19 4,969,087 5,153,603 RGD:9586735
G KDM5B lysine demethylase 5B JBrowse link 1 202,724,495 202,809,470 RGD:9587777
G KDR kinase insert domain receptor JBrowse link 4 55,078,481 55,125,595 RGD:11554173
G KLF2 Kruppel like factor 2 JBrowse link 19 16,324,826 16,328,685 RGD:11554173
G KLF5 Kruppel like factor 5 JBrowse link 13 73,054,976 73,077,542 RGD:11554173
G KRAS KRAS proto-oncogene, GTPase JBrowse link 12 25,205,246 25,250,929 RGD:11060146
RGD:8554872
RGD:11554173
RGD:11568690
G LAMA1 laminin subunit alpha 1 JBrowse link 18 6,941,742 7,117,797 RGD:11554173
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 JBrowse link 12 71,439,798 71,586,310 RGD:11554173
G LGR6 leucine rich repeat containing G protein-coupled receptor 6 JBrowse link 1 202,193,990 202,319,761 RGD:11554173
G LINC00673 long intergenic non-protein coding RNA 673 JBrowse link 17 72,403,322 72,592,804 RGD:11554173
G LPAR1 lysophosphatidic acid receptor 1 JBrowse link 9 110,873,252 111,038,998 RGD:11554173
G LRRC3B leucine rich repeat containing 3B JBrowse link 3 26,622,806 26,717,301 RGD:11554173
G LRRC56 leucine rich repeat containing 56 JBrowse link 11 518,967 554,916 RGD:8554872
G LY96 lymphocyte antigen 96 JBrowse link 8 73,991,275 74,099,807 RGD:11554173
G MAF MAF bZIP transcription factor JBrowse link 16 79,202,624 79,601,952 RGD:11554173
G MAP2K1 mitogen-activated protein kinase kinase 1 JBrowse link 15 66,386,873 66,491,544 RGD:8554872
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:13210794
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:13210794
G MBD4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link 3 129,430,944 129,440,179 RGD:2316846
RGD:9588979
G MCC MCC regulator of WNT signaling pathway JBrowse link 5 113,022,101 113,488,453 RGD:7240710
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 7 116,672,196 116,798,386 RGD:2317534
G MIR106B microRNA 106b JBrowse link 7 100,093,993 100,094,074 RGD:11554173
G MIR1271 microRNA 1271 JBrowse link 5 176,367,946 176,368,031 RGD:11554173
G MIR1273C microRNA 1273c JBrowse link 6 154,853,360 154,853,436 RGD:11554173
G MIR130B microRNA 130b JBrowse link 22 21,653,304 21,653,385 RGD:11554173
G MIR26B microRNA 26b JBrowse link 2 218,402,646 218,402,722 RGD:11554173
G MIR93 microRNA 93 JBrowse link 7 100,093,768 100,093,847 RGD:11554173
G MKI67 marker of proliferation Ki-67 JBrowse link 10 128,096,659 128,126,423 RGD:11554173
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:2306714
RGD:11554173
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,532 RGD:7240710
RGD:11554173
G MMP1 matrix metallopeptidase 1 JBrowse link 11 102,789,919 102,798,160 RGD:7207022
RGD:11554173
G MMP2 matrix metallopeptidase 2 JBrowse link 16 55,478,830 55,506,691 RGD:8657112
RGD:11554173
G MMP3 matrix metallopeptidase 3 JBrowse link 11 102,835,801 102,843,609 RGD:7207065
G MMP9 matrix metallopeptidase 9 JBrowse link 20 46,008,908 46,016,561 RGD:8657112
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:2306714
RGD:11554173
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:2306714
G MTDH metadherin JBrowse link 8 97,643,972 97,730,260 RGD:11554173
G MTHFR methylenetetrahydrofolate reductase JBrowse link 1 11,785,723 11,806,103 RGD:11554173
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:8554872
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 5 7,851,186 7,901,124 RGD:11554173
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:11554173
G NAMPT nicotinamide phosphoribosyltransferase JBrowse link 7 106,248,298 106,284,983 RGD:11554173
G NAP1L1 nucleosome assembly protein 1 like 1 JBrowse link 12 76,036,585 76,084,687 RGD:9590076
G NEURL1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 10 103,493,705 103,592,546 RGD:11554173
G NME1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 17 51,153,559 51,162,089 RGD:11554173
G NME2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 17 51,165,536 51,171,744 RGD:11554173
G NQO1 NAD(P)H quinone dehydrogenase 1 JBrowse link 16 69,709,401 69,726,560 RGD:11554173
G NR4A2 nuclear receptor subfamily 4 group A member 2 JBrowse link 2 156,324,432 156,332,724 RGD:11554173
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
RGD:7240710
G NRCAM neuronal cell adhesion molecule JBrowse link 7 108,147,626 108,456,720 RGD:11554173
G NT5C 5', 3'-nucleotidase, cytosolic JBrowse link 17 75,130,225 75,131,965 RGD:11554173
G NTNG1 netrin G1 JBrowse link 1 107,140,017 107,484,923 RGD:11554173
G NUSAP1 nucleolar and spindle associated protein 1 JBrowse link 15 41,332,841 41,381,050 RGD:11554173
G NXN nucleoredoxin JBrowse link 17 799,310 979,776 RGD:11554173
G ODC1 ornithine decarboxylase 1 JBrowse link 2 10,439,968 10,448,327 RGD:7240710
RGD:11554173
G PAIP2 poly(A) binding protein interacting protein 2 JBrowse link 5 139,341,832 139,369,720 RGD:11554173
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:11554173
G PAX8 paired box 8 JBrowse link 2 113,215,997 113,278,921 RGD:11554173
G PDCD1 programmed cell death 1 JBrowse link 2 241,849,881 241,858,908 RGD:9589083
G PDGFRL platelet derived growth factor receptor like JBrowse link 8 17,576,433 17,643,144 RGD:7240710
G PECAM1 platelet and endothelial cell adhesion molecule 1 JBrowse link 17 64,319,415 64,413,844 RGD:6771214
G PGM1 phosphoglucomutase 1 JBrowse link 1 63,593,411 63,660,245 RGD:11554173
G PHETA1 PH domain containing endocytic trafficking adaptor 1 JBrowse link 12 111,360,651 111,369,095 RGD:11554173
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
RGD:7240710
G PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma JBrowse link 7 106,865,282 106,908,980 RGD:6482694
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 5 68,215,737 68,301,821 RGD:8554872
G PIK3R3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 1 46,040,140 46,174,901 RGD:13432046
G PLA2G2A phospholipase A2 group IIA JBrowse link 1 19,975,431 19,980,434 RGD:619597
RGD:7240710
G PMM2 phosphomannomutase 2 JBrowse link 16 8,797,813 8,849,326 RGD:11554173
G PMS1 PMS1 homolog 1, mismatch repair system component JBrowse link 2 189,784,085 189,877,629 RGD:2306714
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:2306714
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:11554173
G POLD3 DNA polymerase delta 3, accessory subunit JBrowse link 11 74,592,582 74,669,341 RGD:11554173
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:8554872
RGD:7240710
RGD:11554173
G POSTN periostin JBrowse link 13 37,562,582 37,598,844 RGD:11554173
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,485 12,434,356 RGD:11554173
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E JBrowse link 17 58,755,854 58,985,617 RGD:11554173
G PPOX protoporphyrinogen oxidase JBrowse link 1 161,165,824 161,178,277 RGD:11554173
G PPP1R14A protein phosphatase 1 regulatory inhibitor subunit 14A JBrowse link 19 38,251,237 38,256,374 RGD:11554173
G PPP1R9B protein phosphatase 1 regulatory subunit 9B JBrowse link 17 50,133,737 50,150,677 RGD:9999401
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 52,190,052 52,229,518 RGD:8554872
G PRKCB protein kinase C beta JBrowse link 16 23,835,983 24,220,611 RGD:11554173
G PRKCE protein kinase C epsilon JBrowse link 2 45,651,315 46,187,990 RGD:11554173
G PRKD1 protein kinase D1 JBrowse link 14 29,576,479 29,927,847 RGD:11554173
G PROM1 prominin 1 JBrowse link 4 15,968,226 16,084,059 RGD:11554173
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:8554872
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:11554173
G PTPN11 protein tyrosine phosphatase non-receptor type 11 JBrowse link 12 112,418,898 112,509,918 RGD:8554872
G PTPN12 protein tyrosine phosphatase non-receptor type 12 JBrowse link 7 77,537,190 77,640,069 RGD:7240710
G PTPRD protein tyrosine phosphatase receptor type D JBrowse link 9 8,314,246 10,613,002 RGD:11554173
G PTPRJ protein tyrosine phosphatase receptor type J JBrowse link 11 47,980,504 48,170,839 RGD:7240710
G PYCARD PYD and CARD domain containing JBrowse link 16 31,201,486 31,202,776 RGD:11554173
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:7240710
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 3 12,583,601 12,664,201 RGD:8554872
G RASL11A RAS like family 11 member A JBrowse link 13 27,270,830 27,275,192 RGD:11554173
G RET ret proto-oncogene JBrowse link 10 43,077,027 43,130,351 RGD:11554173
G RHOA ras homolog family member A JBrowse link 3 49,359,145 49,411,976 RGD:8554872
G RHPN2 rhophilin Rho GTPase binding protein 2 JBrowse link 19 32,978,592 33,064,888 RGD:11554173
G RNF182 ring finger protein 182 JBrowse link 6 13,924,446 13,980,310 RGD:11554173
G RNF43 ring finger protein 43 JBrowse link 17 58,352,500 58,418,894 RGD:11554173
G RRM2 ribonucleotide reductase regulatory subunit M2 JBrowse link 2 10,122,568 10,211,010 RGD:11554173
G RUNX3 RUNX family transcription factor 3 JBrowse link 1 24,899,511 24,965,158 RGD:2302552
G SATB2 SATB homeobox 2 JBrowse link 2 199,269,500 199,471,266 RGD:11554173
G SCG5 secretogranin V JBrowse link 15 32,641,613 32,697,098 RGD:11554173
G SELENBP1 selenium binding protein 1 JBrowse link 1 151,364,304 151,372,725 RGD:11554173
G SELENOP selenoprotein P JBrowse link 5 42,799,880 42,812,076 RGD:11554173
G SERPINB5 serpin family B member 5 JBrowse link 18 63,476,958 63,505,085 RGD:11554173
G SESN2 sestrin 2 JBrowse link 1 28,259,452 28,282,491 RGD:11554173
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 41,261,962 41,309,473 RGD:11554173
G SFRP2 secreted frizzled related protein 2 JBrowse link 4 153,780,591 153,789,083 RGD:11554173
G SFRP4 secreted frizzled related protein 4 JBrowse link 7 37,905,932 37,916,817 RGD:11554173
G SFRP5 secreted frizzled related protein 5 JBrowse link 10 97,766,751 97,771,999 RGD:11554173
G SFXN1 sideroflexin 1 JBrowse link 5 175,478,560 175,529,742 RGD:11554173
G SH3TC1 SH3 domain and tetratricopeptide repeats 1 JBrowse link 4 8,182,072 8,241,103 RGD:11554173
G SLC19A1 solute carrier family 19 member 1 JBrowse link 21 45,502,517 45,563,140 RGD:11554173
G SLC22A15 solute carrier family 22 member 15 JBrowse link 1 115,976,513 116,070,054 RGD:11554173
G SLCO1B3 solute carrier organic anion transporter family member 1B3 JBrowse link 12 20,810,705 20,916,911 RGD:11554173
G SLCO2A1 solute carrier organic anion transporter family member 2A1 JBrowse link 3 133,932,701 134,029,955 RGD:11554173
G SMAD3 SMAD family member 3 JBrowse link 15 67,065,602 67,195,195 RGD:11554173
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:8554872
RGD:11554173
G SMAD7 SMAD family member 7 JBrowse link 18 48,919,853 48,950,711 RGD:8554872
RGD:7240710
RGD:11554173
G SMAD9 SMAD family member 9 JBrowse link 13 36,844,831 36,920,721 RGD:11554173
G SNRPF small nuclear ribonucleoprotein polypeptide F JBrowse link 12 95,858,952 95,867,053 RGD:10768838
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:1581258
RGD:11554173
G SOX17 SRY-box transcription factor 17 JBrowse link 8 54,457,935 54,460,892 RGD:11554173
G SPARC secreted protein acidic and cysteine rich JBrowse link 5 151,661,096 151,686,915 RGD:11554173
G SPINT1 serine peptidase inhibitor, Kunitz type 1 JBrowse link 15 40,844,043 40,858,207 RGD:1581311
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 37,344,685 37,405,432 RGD:7240710
G STARD8 StAR related lipid transfer domain containing 8 JBrowse link X 68,647,669 68,725,842 RGD:11554173
G STRAP serine/threonine kinase receptor associated protein JBrowse link 12 15,882,382 15,903,478 RGD:11554173
G SULT1A1 sulfotransferase family 1A member 1 JBrowse link 16 28,605,587 28,623,586 RGD:1581449
G SULT2B1 sulfotransferase family 2B member 1 JBrowse link 19 48,552,172 48,599,427 RGD:11554173
G SYNE1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 6 152,121,684 152,637,395 RGD:11554173
G TCERG1L transcription elongation regulator 1 like JBrowse link 10 131,092,391 131,311,721 RGD:11554173
G TCF7L2 transcription factor 7 like 2 JBrowse link 10 112,950,247 113,167,678 RGD:11554173
G TCN2 transcobalamin 2 JBrowse link 22 30,607,083 30,627,271 RGD:11554173
G TET2 tet methylcytosine dioxygenase 2 JBrowse link 4 105,145,875 105,279,803 RGD:11554173
G TFPI2 tissue factor pathway inhibitor 2 JBrowse link 7 93,885,396 93,890,753 RGD:11554173
G TFRC transferrin receptor JBrowse link 3 196,018,694 196,082,123 RGD:11554173
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:11554173
G TGFB2 transforming growth factor beta 2 JBrowse link 1 218,345,284 218,444,619 RGD:13432077
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 99,104,038 99,154,192 RGD:11554173
G TK1 thymidine kinase 1 JBrowse link 17 78,174,079 78,187,204 RGD:11554173
G TLR2 toll like receptor 2 JBrowse link 4 153,684,080 153,710,643 RGD:7240710
RGD:11554173
G TLR4 toll like receptor 4 JBrowse link 9 117,704,403 117,724,735 RGD:11554173
G TMEM238L transmembrane protein 238 like JBrowse link 17 10,794,913 10,804,099 RGD:11554173
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:11554173
G TNFSF10 TNF superfamily member 10 JBrowse link 3 172,505,508 172,523,430 RGD:11554173
G TNFSF13 TNF superfamily member 13 JBrowse link 17 7,558,292 7,561,608 RGD:11554173
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:1331525
RGD:8554872
RGD:11554173
RGD:7240710
G TP53TG1 TP53 target 1 JBrowse link 7 87,325,347 87,345,492 RGD:11554173
G TP63 tumor protein p63 JBrowse link 3 189,596,746 189,897,279 RGD:11554173
G TRIM28 tripartite motif containing 28 JBrowse link 19 58,544,064 58,550,722 RGD:11554173
G TRPM7 transient receptor potential cation channel subfamily M member 7 JBrowse link 15 50,557,158 50,686,797 RGD:11554173
G TXNRD1 thioredoxin reductase 1 JBrowse link 12 104,215,779 104,350,307 RGD:11554173
G TYMP thymidine phosphorylase JBrowse link 22 50,525,752 50,530,085 RGD:11554173
G TYMS thymidylate synthetase JBrowse link 18 657,653 673,578 RGD:5133433
RGD:11554173
G UMPS uridine monophosphate synthetase JBrowse link 3 124,730,366 124,749,273 RGD:11554173
G UNG uracil DNA glycosylase JBrowse link 12 109,097,597 109,110,992 RGD:11554173
G VTI1A vesicle transport through interaction with t-SNAREs 1A JBrowse link 10 112,446,988 112,855,368 RGD:11554173
G WIF1 WNT inhibitory factor 1 JBrowse link 12 65,050,626 65,121,305 RGD:11554173
G XAF1 XIAP associated factor 1 JBrowse link 17 6,755,408 6,775,647 RGD:11554173
G XPO1 exportin 1 JBrowse link 2 61,477,849 61,538,522 RGD:8554872
G YAP1 Yes associated protein 1 JBrowse link 11 102,109,957 102,233,424 RGD:11554173
G ZFP36L2 ZFP36 ring finger protein like 2 JBrowse link 2 43,222,402 43,226,606 RGD:11554173
G ZKSCAN3 zinc finger with KRAB and SCAN domains 3 JBrowse link 6 28,349,913 28,369,174 RGD:11554173
G ZMIZ1 zinc finger MIZ-type containing 1 JBrowse link 10 79,068,966 79,316,519 RGD:11554173
G ZNF292 zinc finger protein 292 JBrowse link 6 87,155,565 87,265,943 RGD:11554173
G ZNF432 zinc finger protein 432 JBrowse link 19 52,031,378 52,048,838 RGD:11554173
G ZNF569 zinc finger protein 569 JBrowse link 19 37,411,146 37,469,263 RGD:11554173
anus benign neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IFNB1 interferon beta 1 JBrowse link 9 21,077,104 21,077,942 RGD:11554173
ascending colon cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
Attenuated Adenomatous Polyposis Coli term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 9 98,807,670 98,850,081 RGD:8554872
colon adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA7 annexin A7 JBrowse link 10 73,375,101 73,414,058 RGD:2292654
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:1601201
RGD:8554872
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:734633
G CSF2 colony stimulating factor 2 JBrowse link 5 132,073,789 132,076,170 RGD:10450245
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:1599637
G DAXX death domain associated protein JBrowse link 6 33,318,558 33,323,016 RGD:9587838
G FECH ferrochelatase JBrowse link 18 57,544,377 57,586,708 RGD:14700888
G HMGB1 high mobility group box 1 JBrowse link 13 30,456,704 30,617,597 RGD:10402080
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:13210775
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:13210775
G MGMT O-6-methylguanine-DNA methyltransferase JBrowse link 10 129,467,214 129,770,983 RGD:1599637
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
G PCSK5 proprotein convertase subtilisin/kexin type 5 JBrowse link 9 75,890,644 76,362,975 RGD:11556207
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:5685670
G PIK3R3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 1 46,040,140 46,174,901 RGD:13432053
G RAC1 Rac family small GTPase 1 JBrowse link 7 6,374,527 6,403,967 RGD:13432049
RGD:13432051
G RAD54L RAD54 like JBrowse link 1 46,247,688 46,278,477 RGD:8554872
G SRSF4 serine and arginine rich splicing factor 4 JBrowse link 1 29,147,743 29,181,900 RGD:11039405
G SRSF5 serine and arginine rich splicing factor 5 JBrowse link 14 69,767,112 69,772,005 RGD:11039405
G SRSF6 serine and arginine rich splicing factor 6 JBrowse link 20 43,457,893 43,464,243 RGD:11039405
G TERT telomerase reverse transcriptase JBrowse link 5 1,253,148 1,295,068 RGD:11038656
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:13432089
G VEGFC vascular endothelial growth factor C JBrowse link 4 176,683,538 176,792,922 RGD:2315488
colon adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHKA choline kinase alpha JBrowse link 11 68,052,859 68,121,391 RGD:10401945
G F5 coagulation factor V JBrowse link 1 169,511,951 169,586,630 RGD:10449102
G RAC1 Rac family small GTPase 1 JBrowse link 7 6,374,527 6,403,967 RGD:13432048
colon cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTR1A actin related protein 1A JBrowse link 10 102,479,229 102,502,712 RGD:13831341
G ACVR2A activin A receptor type 2A JBrowse link 2 147,844,517 147,930,827 RGD:2301065
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:8554872
G AKT3 AKT serine/threonine kinase 3 JBrowse link 1 243,488,233 243,851,079 RGD:13209140
G APAF1 apoptotic peptidase activating factor 1 JBrowse link 12 98,645,141 98,735,433 RGD:13703116
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 12 7,649,400 7,670,599 RGD:625559
G BAD BCL2 associated agonist of cell death JBrowse link 11 64,269,828 64,284,704 RGD:10053668
G BCL10 BCL10 immune signaling adaptor JBrowse link 1 85,265,776 85,276,632 RGD:8554872
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:10053668
G BIK BCL2 interacting killer JBrowse link 22 43,110,750 43,129,712 RGD:14394819
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:8554872
G BRCA1 BRCA1 DNA repair associated JBrowse link 17 43,044,295 43,125,364 RGD:1599497
G BRD4 bromodomain containing 4 JBrowse link 19 15,236,836 15,332,539 RGD:9586351
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:13209142
RGD:13209143
G CASP7 caspase 7 JBrowse link 10 113,679,162 113,730,909 RGD:13209143
G CCL2 C-C motif chemokine ligand 2 JBrowse link 17 34,255,285 34,257,203 RGD:5135051
G CCL3 C-C motif chemokine ligand 3 JBrowse link 17 36,088,256 36,090,143 RGD:5135051
G CCND2 cyclin D2 JBrowse link 12 4,273,762 4,305,353 RGD:2289181
G CDH1 cadherin 1 JBrowse link 16 68,737,292 68,835,537 RGD:8554872
G CHAF1A chromatin assembly factor 1 subunit A JBrowse link 19 4,402,596 4,448,322 RGD:9587457
G CHKA choline kinase alpha JBrowse link 11 68,052,859 68,121,391 RGD:10401869
G CRP C-reactive protein JBrowse link 1 159,712,289 159,714,589 RGD:6903278
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:8554872
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 JBrowse link 10 133,527,363 133,539,123 RGD:14700924
G ESR2 estrogen receptor 2 JBrowse link 14 64,226,707 64,338,631 RGD:8694174
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:8554872
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:8554872
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 32,718,004 32,745,106 RGD:8554872
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:10045586
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 JBrowse link 16 22,814,162 22,916,338 RGD:2317633
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 8 42,270,727 42,332,653 RGD:7495781
G IL10 interleukin 10 JBrowse link 1 206,767,602 206,772,494 RGD:11534627
G KDM3A lysine demethylase 3A JBrowse link 2 86,440,647 86,492,716 RGD:9590225
G LCN2 lipocalin 2 JBrowse link 9 128,149,453 128,153,453 RGD:2316492
G MAP2K3 mitogen-activated protein kinase kinase 3 JBrowse link 17 21,284,679 21,315,240 RGD:7495808
G MIR126 microRNA 126 JBrowse link 9 136,670,602 136,670,686 RGD:13432043
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
G MMP3 matrix metallopeptidase 3 JBrowse link 11 102,835,801 102,843,609 RGD:2316492
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
G MT-CO1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,904 7,445 RGD:8554872
G MT-CO2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,586 8,269 RGD:8554872
G MT-CYB mitochondrially encoded cytochrome b JBrowse link MT 14,747 15,887 RGD:8554872
G MT-ND4L mitochondrially encoded NADH 4L dehydrogenase JBrowse link MT 10,470 10,766 RGD:8554872
G MTUS1 microtubule associated scaffold protein 1 JBrowse link 8 17,643,794 17,801,579 RGD:2317016
G MUC2 mucin 2, oligomeric mucus/gel-forming JBrowse link 11 1,074,875 1,110,508 RGD:7349368
RGD:7349371
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:8554872
G NANOG Nanog homeobox JBrowse link 12 7,789,402 7,799,146 RGD:7240527
G NCOA6 nuclear receptor coactivator 6 JBrowse link 20 34,714,774 34,825,651 RGD:9590137
G NQO1 NAD(P)H quinone dehydrogenase 1 JBrowse link 16 69,709,401 69,726,560 RGD:5133247
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link 19 18,153,163 18,170,532 RGD:13432043
G PIK3R5 phosphoinositide-3-kinase regulatory subunit 5 JBrowse link 17 8,878,916 8,965,712 RGD:13432047
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:8554872
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:8554872
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:8554872
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,485 12,434,356 RGD:1601444
RGD:8554872
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 5 40,759,379 40,798,195 RGD:5685669
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:12859043
G PTGER3 prostaglandin E receptor 3 JBrowse link 1 70,852,358 71,047,816 RGD:9850265
G PTPN12 protein tyrosine phosphatase non-receptor type 12 JBrowse link 7 77,537,190 77,640,069 RGD:8554872
G PTPRJ protein tyrosine phosphatase receptor type J JBrowse link 11 47,980,504 48,170,839 RGD:8554872
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:8554872
G REG1A regenerating family member 1 alpha JBrowse link 2 79,120,488 79,123,409 RGD:9850131
G SCG5 secretogranin V JBrowse link 15 32,641,613 32,697,098 RGD:8554872
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 37,344,685 37,405,432 RGD:1601371
RGD:8554872
G SRSF1 serine and arginine rich splicing factor 1 JBrowse link 17 58,000,919 58,007,346 RGD:11038730
G TDGF1 teratocarcinoma-derived growth factor 1 JBrowse link 3 46,574,535 46,582,457 RGD:11561894
G TFF3 trefoil factor 3 JBrowse link 21 42,311,667 42,315,596 RGD:7349371
G TGFB3 transforming growth factor beta 3 JBrowse link 14 75,958,061 75,983,011 RGD:13432091
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,606,472 30,694,142 RGD:2301065
RGD:8554872
G TNFRSF10A TNF receptor superfamily member 10a JBrowse link 8 23,190,452 23,225,102 RGD:2325778
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:8554872
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,770,209 43,786,487 RGD:5135051
G XRCC2 X-ray repair cross complementing 2 JBrowse link 7 152,644,776 152,676,141 RGD:8554872
colon carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:8554872
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G AXIN2 axin 2 JBrowse link 17 65,528,563 65,561,648 RGD:8554872
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:8554872
G BCL10 BCL10 immune signaling adaptor JBrowse link 1 85,265,776 85,276,632 RGD:8554872
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:11567267
RGD:8554872
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,480 32,399,672 RGD:8554872
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:8554872
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 2 110,637,528 110,678,107 RGD:8554872
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 15 40,161,009 40,221,136 RGD:8554872
G CRKL CRK like proto-oncogene, adaptor protein JBrowse link 22 20,917,407 20,953,747 RGD:7488899
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:8554872
G DCC DCC netrin 1 receptor JBrowse link 18 52,340,172 53,535,899 RGD:8554872
G DLC1 DLC1 Rho GTPase activating protein JBrowse link 8 13,083,361 13,604,620 RGD:8554872
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:8554872
G FANCC FA complementation group C JBrowse link 9 95,099,054 95,317,730 RGD:8554872
G FANCE FA complementation group E JBrowse link 6 35,452,338 35,467,106 RGD:8554872
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:8554872
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:8554872
G FLT1 fms related tyrosine kinase 1 JBrowse link 13 28,300,346 28,495,128 RGD:8554872
G FLT3LG fms related tyrosine kinase 3 ligand JBrowse link 19 49,474,172 49,487,037 RGD:11049504
G FLT4 fms related tyrosine kinase 4 JBrowse link 5 180,601,506 180,650,298 RGD:8554872
G HPGD 15-hydroxyprostaglandin dehydrogenase JBrowse link 4 174,490,175 174,522,898 RGD:5688759
G IGF2R insulin like growth factor 2 receptor JBrowse link 6 159,969,099 160,111,504 RGD:14985218
G KDR kinase insert domain receptor JBrowse link 4 55,078,481 55,125,595 RGD:8554872
G MCC MCC regulator of WNT signaling pathway JBrowse link 5 113,022,101 113,488,453 RGD:8554872
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,532 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
G MT-ND1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 3,307 4,262 RGD:8554872
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:8554872
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
G PDGFRL platelet derived growth factor receptor like JBrowse link 8 17,576,433 17,643,144 RGD:8554872
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:8554872
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,485 12,434,356 RGD:8554872
G PRF1 perforin 1 JBrowse link 10 70,597,348 70,602,788 RGD:6482822
G PTPN12 protein tyrosine phosphatase non-receptor type 12 JBrowse link 7 77,537,190 77,640,069 RGD:8554872
G PTPRJ protein tyrosine phosphatase receptor type J JBrowse link 11 47,980,504 48,170,839 RGD:8554872
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:8554872
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit JBrowse link 6 111,299,031 111,483,715 RGD:8554872
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:13432074
G TGFB2 transforming growth factor beta 2 JBrowse link 1 218,345,284 218,444,619 RGD:13432074
RGD:13432084
G TNFRSF17 TNF receptor superfamily member 17 JBrowse link 16 11,965,210 11,968,068 RGD:2317311
G TNFRSF1A TNF receptor superfamily member 1A JBrowse link 12 6,328,771 6,342,076 RGD:5131434
G TNFRSF1B TNF receptor superfamily member 1B JBrowse link 1 12,166,948 12,209,222 RGD:5131434
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:8554872
G TYMS thymidylate synthetase JBrowse link 18 657,653 673,578 RGD:5133430
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 JBrowse link 19 18,563,766 18,577,550 RGD:11352739
Colonic Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2M alpha-2-macroglobulin JBrowse link 12 9,067,708 9,116,229 RGD:11554173
G ACTA2 actin alpha 2, smooth muscle JBrowse link 10 88,935,074 88,991,397 RGD:11554173
G ACTG2 actin gamma 2, smooth muscle JBrowse link 2 73,893,008 73,919,865 RGD:11554173
G ALDH1B1 aldehyde dehydrogenase 1 family member B1 JBrowse link 9 38,392,702 38,398,665 RGD:11554173
G ALOX5 arachidonate 5-lipoxygenase JBrowse link 10 45,374,166 45,446,121 RGD:11554173
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:12792250
RGD:11554173
G ASCL2 achaete-scute family bHLH transcription factor 2 JBrowse link 11 2,268,498 2,270,952 RGD:11554173
G ATP7A ATPase copper transporting alpha JBrowse link X 77,910,656 78,050,395 RGD:11554173
G AXIN2 axin 2 JBrowse link 17 65,528,563 65,561,648 RGD:11554173
G BAK1 BCL2 antagonist/killer 1 JBrowse link 6 33,572,552 33,580,296 RGD:11554173
G BAP1 BRCA1 associated protein 1 JBrowse link 3 52,401,004 52,410,030 RGD:11554173
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:11554173
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:2293078
RGD:11554173
G BECN1 beclin 1 JBrowse link 17 42,810,132 42,824,316 RGD:11554173
G BIRC5 baculoviral IAP repeat containing 5 JBrowse link 17 78,214,253 78,225,635 RGD:11554173
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:8554872
G BRD4 bromodomain containing 4 JBrowse link 19 15,236,836 15,332,539 RGD:11554173
G C5orf30 chromosome 5 open reading frame 30 JBrowse link 5 103,258,763 103,278,660 RGD:11554173
G CA4 carbonic anhydrase 4 JBrowse link 17 60,149,942 60,179,021 RGD:11554173
G CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 JBrowse link 7 81,946,444 82,443,956 RGD:11554173
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:13209144
G CBR1 carbonyl reductase 1 JBrowse link 21 36,070,024 36,073,164 RGD:11554173
G CCAT1 colon cancer associated transcript 1 JBrowse link 8 127,207,382 127,219,268 RGD:11554173
G CCL2 C-C motif chemokine ligand 2 JBrowse link 17 34,255,285 34,257,203 RGD:8548881
G CCL20 C-C motif chemokine ligand 20 JBrowse link 2 227,813,842 227,817,556 RGD:11554173
G CCND1 cyclin D1 JBrowse link 11 69,641,156 69,654,474 RGD:11554173
G CCND2 cyclin D2 JBrowse link 12 4,273,762 4,305,353 RGD:11554173
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:2289293
G CCNH cyclin H JBrowse link 5 87,311,471 87,413,033 RGD:11554173
G CD40LG CD40 ligand JBrowse link X 136,648,158 136,660,390 RGD:5490978
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 6 36,676,250 36,687,339 RGD:11554173
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,967,752 21,995,324 RGD:1600823
G CDX2 caudal type homeobox 2 JBrowse link 13 27,960,918 27,969,368 RGD:11554173
G CKM creatine kinase, M-type JBrowse link 19 45,306,413 45,322,875 RGD:11554173
G COL18A1 collagen type XVIII alpha 1 chain JBrowse link 21 45,405,165 45,513,720 RGD:1600901
G CP ceruloplasmin JBrowse link 3 149,162,410 149,222,008 RGD:11554173
G CRYAB crystallin alpha B JBrowse link 11 111,908,564 111,923,740 RGD:11554173
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:11554173
G CXCL10 C-X-C motif chemokine ligand 10 JBrowse link 4 76,021,118 76,023,497 RGD:11554173
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 JBrowse link 10 93,073,475 93,077,885 RGD:11554173
G DEFA5 defensin alpha 5 JBrowse link 8 7,055,304 7,056,739 RGD:11554173
G DMBT1 deleted in malignant brain tumors 1 JBrowse link 10 122,560,665 122,643,736 RGD:11554173
G DNMT1 DNA methyltransferase 1 JBrowse link 19 10,133,346 10,194,953 RGD:9588972
RGD:11554173
G DPYD dihydropyrimidine dehydrogenase JBrowse link 1 97,077,743 97,921,059 RGD:11554173
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:11554173
G EIF3I eukaryotic translation initiation factor 3 subunit I JBrowse link 1 32,221,584 32,231,604 RGD:11554173
G EOMES eomesodermin JBrowse link 3 27,715,949 27,722,715 RGD:11554173
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 17 39,688,084 39,728,662 RGD:11554173
G ERBB3 erb-b2 receptor tyrosine kinase 3 JBrowse link 12 56,080,025 56,103,507 RGD:8554872
G F5 coagulation factor V JBrowse link 1 169,511,951 169,586,630 RGD:11554173
G FAS Fas cell surface death receptor JBrowse link 10 88,968,429 89,017,059 RGD:1600355
G FBP1 fructose-bisphosphatase 1 JBrowse link 9 94,603,133 94,640,258 RGD:11554173
G FOLR1 folate receptor alpha JBrowse link 11 72,189,709 72,196,323 RGD:11554173
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:13210752
G FZD2 frizzled class receptor 2 JBrowse link 17 44,557,484 44,561,262 RGD:11554173
G GAP43 growth associated protein 43 JBrowse link 3 115,623,510 115,721,485 RGD:11554173
G GAST gastrin JBrowse link 17 41,712,331 41,715,969 RGD:11554173
G GCG glucagon JBrowse link 2 162,142,882 162,152,247 RGD:11554173
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 JBrowse link 6 101,393,708 102,070,083 RGD:11554173
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:13210765
RGD:13210769
G GSTM5 glutathione S-transferase mu 5 JBrowse link 1 109,711,751 109,718,268 RGD:11554173
G GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 JBrowse link 4 155,666,710 155,737,059 RGD:11554173
G HDAC2 histone deacetylase 2 JBrowse link 6 113,933,028 113,971,148 RGD:9590193
RGD:9590331
G HES1 hes family bHLH transcription factor 1 JBrowse link 3 194,136,148 194,138,732 RGD:11554173
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:10395382
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 JBrowse link 1 119,747,996 119,768,932 RGD:11554173
G HSPA2 heat shock protein family A (Hsp70) member 2 JBrowse link 14 64,540,468 64,543,237 RGD:11554173
G HSPB1 heat shock protein family B (small) member 1 JBrowse link 7 76,302,673 76,304,292 RGD:11554173
G ICAM1 intercellular adhesion molecule 1 JBrowse link 19 10,271,120 10,286,615 RGD:11554173
G ID3 inhibitor of DNA binding 3, HLH protein JBrowse link 1 23,557,926 23,559,501 RGD:11554173
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:11554173
G IGF2 insulin like growth factor 2 JBrowse link 11 2,129,112 2,149,603 RGD:11554173
G IGFBP1 insulin like growth factor binding protein 1 JBrowse link 7 45,888,488 45,893,660 RGD:11554173
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:11554173
G IL1RN interleukin 1 receptor antagonist JBrowse link 2 113,099,365 113,134,016 RGD:11554173
G IL32 interleukin 32 JBrowse link 16 3,065,403 3,069,819 RGD:11554173
G ITGA7 integrin subunit alpha 7 JBrowse link 12 55,684,568 55,716,037 RGD:11554173
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 JBrowse link 3 52,812,962 52,830,701 RGD:11554173
G JAK3 Janus kinase 3 JBrowse link 19 17,824,782 17,848,071 RGD:11533940
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:11554173
G KCNH2 potassium voltage-gated channel subfamily H member 2 JBrowse link 7 150,944,956 150,978,321 RGD:11554173
G KDM1A lysine demethylase 1A JBrowse link 1 23,019,443 23,083,691 RGD:11554173
G KDM5B lysine demethylase 5B JBrowse link 1 202,724,495 202,809,470 RGD:11554173
G KDR kinase insert domain receptor JBrowse link 4 55,078,481 55,125,595 RGD:5684533
G KRAS KRAS proto-oncogene, GTPase JBrowse link 12 25,205,246 25,250,929 RGD:11554173
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 4 108,047,545 108,168,956 RGD:11554173
G LEP leptin JBrowse link 7 128,241,201 128,257,629 RGD:11554173
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 JBrowse link 12 71,439,798 71,586,310 RGD:11554173
G LPL lipoprotein lipase JBrowse link 8 19,939,253 19,967,259 RGD:11554173
G LRG1 leucine rich alpha-2-glycoprotein 1 JBrowse link 19 4,536,402 4,540,036 RGD:11554173
G LTF lactotransferrin JBrowse link 3 46,435,645 46,485,234 RGD:11554173
G MAD1L1 mitotic arrest deficient 1 like 1 JBrowse link 7 1,815,795 2,232,945 RGD:1599865
G MAOB monoamine oxidase B JBrowse link X 43,766,610 43,882,450 RGD:11554173
G MAP2K6 mitogen-activated protein kinase kinase 6 JBrowse link 17 69,414,697 69,553,865 RGD:11554173
G MAPK8 mitogen-activated protein kinase 8 JBrowse link 10 48,306,639 48,439,360 RGD:13217412
RGD:13217414
G MCM2 minichromosome maintenance complex component 2 JBrowse link 3 127,598,411 127,622,436 RGD:11554173
G MECOM MDS1 and EVI1 complex locus JBrowse link 3 169,083,499 169,663,781 RGD:11554173
G MEN1 menin 1 JBrowse link 11 64,803,514 64,811,294 RGD:1304318
G MEP1A meprin A subunit alpha JBrowse link 6 46,793,384 46,845,987 RGD:11554173
G MIR223 microRNA 223 JBrowse link X 66,018,870 66,018,979 RGD:11554173
G MIR98 microRNA 98 JBrowse link X 53,556,223 53,556,341 RGD:11554173
G MKI67 marker of proliferation Ki-67 JBrowse link 10 128,096,659 128,126,423 RGD:6483523
RGD:11554173
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:11554173
G MMP12 matrix metallopeptidase 12 JBrowse link 11 102,862,736 102,874,982 RGD:11554173
G MMP7 matrix metallopeptidase 7 JBrowse link 11 102,520,508 102,530,747 RGD:11554173
G MMP9 matrix metallopeptidase 9 JBrowse link 20 46,008,908 46,016,561 RGD:2325778
RGD:11554173
RGD:5135051
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2317740
G MTHFR methylenetetrahydrofolate reductase JBrowse link 1 11,785,723 11,806,103 RGD:11554173
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:11554173
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:11554173
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:7240527
RGD:11554173
G NDRG2 NDRG family member 2 JBrowse link 14 21,016,763 21,070,872 RGD:11554173
G NFKB1 nuclear factor kappa B subunit 1 JBrowse link 4 102,501,266 102,617,302 RGD:11554173
G NOD2 nucleotide binding oligomerization domain containing 2 JBrowse link 16 50,693,587 50,733,077 RGD:5131515
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:11554173
G NOTCH1 notch receptor 1 JBrowse link 9 136,494,433 136,546,048 RGD:11554173
G NOX1 NADPH oxidase 1 JBrowse link X 100,843,324 100,874,359 RGD:11554173
G NOX4 NADPH oxidase 4 JBrowse link 11 89,324,353 89,589,557 RGD:11554173
G ODC1 ornithine decarboxylase 1 JBrowse link 2 10,439,968 10,448,327 RGD:11554173
G OXT oxytocin/neurophysin I prepropeptide JBrowse link 20 3,068,871 3,072,517 RGD:11554173
G PARP4 poly(ADP-ribose) polymerase family member 4 JBrowse link 13 24,420,930 24,512,993 RGD:11554173
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:11554173
G PCP4 Purkinje cell protein 4 JBrowse link 21 39,867,438 39,929,392 RGD:11554173
G PDCD1 programmed cell death 1 JBrowse link 2 241,849,881 241,858,908 RGD:9589070
G PDGFRB platelet derived growth factor receptor beta JBrowse link 5 150,113,839 150,155,845 RGD:2292176
G PECAM1 platelet and endothelial cell adhesion molecule 1 JBrowse link 17 64,319,415 64,413,844 RGD:6771355
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 5 68,215,737 68,301,821 RGD:2290476
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link 19 18,153,163 18,170,532 RGD:13432042
G PLAU plasminogen activator, urokinase JBrowse link 10 73,909,182 73,917,501 RGD:7241262
RGD:7241805
G PLCB1 phospholipase C beta 1 JBrowse link 20 8,132,266 8,884,900 RGD:11554173
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:1599141
G POLB DNA polymerase beta JBrowse link 8 42,338,452 42,371,810 RGD:11554173
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,485 12,434,356 RGD:11554173
G PRF1 perforin 1 JBrowse link 10 70,597,348 70,602,788 RGD:6482812
G PRKN parkin RBR E3 ubiquitin protein ligase JBrowse link 6 161,347,417 162,727,802 RGD:11554173
G PROM1 prominin 1 JBrowse link 4 15,968,226 16,084,059 RGD:11554173
G PRR5-ARHGAP8 PRR5-ARHGAP8 readthrough JBrowse link 22 44,702,198 44,862,784 RGD:11554173
G PTGER3 prostaglandin E receptor 3 JBrowse link 1 70,852,358 71,047,816 RGD:9850265
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:5135051
RGD:11554173
G PTP4A3 protein tyrosine phosphatase 4A3 JBrowse link 8 141,391,995 141,432,454 RGD:11554173
G RCOR1 REST corepressor 1 JBrowse link 14 102,592,593 102,730,572 RGD:11554173
G RECK reversion inducing cysteine rich protein with kazal motifs JBrowse link 9 36,036,905 36,124,455 RGD:11554173
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:11554173
G RFC1 replication factor C subunit 1 JBrowse link 4 39,287,456 39,366,381 RGD:11554173
G RHOJ ras homolog family member J JBrowse link 14 63,204,412 63,293,508 RGD:11554173
G RNF34 ring finger protein 34 JBrowse link 12 121,400,083 121,424,352 RGD:11554173
G RUNX3 RUNX family transcription factor 3 JBrowse link 1 24,899,511 24,965,158 RGD:2302551
G S100A4 S100 calcium binding protein A4 JBrowse link 1 153,543,621 153,545,806 RGD:11554173
G S100A9 S100 calcium binding protein A9 JBrowse link 1 153,357,854 153,361,023 RGD:11554173
G SERPINB5 serpin family B member 5 JBrowse link 18 63,476,958 63,505,085 RGD:11554173
G SERTAD1 SERTA domain containing 1 JBrowse link 19 40,421,589 40,425,992 RGD:11554173
G SH3KBP1 SH3 domain containing kinase binding protein 1 JBrowse link X 19,533,965 19,887,600 RGD:11554173
G SLC16A1 solute carrier family 16 member 1 JBrowse link 1 112,911,847 112,956,353 RGD:11554173
G SLC19A1 solute carrier family 19 member 1 JBrowse link 21 45,502,517 45,563,140 RGD:11554173
G SLC22A1 solute carrier family 22 member 1 JBrowse link 6 160,121,808 160,160,590 RGD:11554173
G SLC2A1 solute carrier family 2 member 1 JBrowse link 1 42,925,375 42,958,868 RGD:11554173
G SLC5A8 solute carrier family 5 member 8 JBrowse link 12 101,155,493 101,210,238 RGD:11554173
G SLCO1B3 solute carrier organic anion transporter family member 1B3 JBrowse link 12 20,810,705 20,916,911 RGD:11554173
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:11554173
G SPARC secreted protein acidic and cysteine rich JBrowse link 5 151,661,096 151,686,915 RGD:11554173
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 37,344,685 37,405,432 RGD:11554173
G STAT3 signal transducer and activator of transcription 3 JBrowse link 17 42,313,324 42,388,502 RGD:11554173
G SULT1A1 sulfotransferase family 1A member 1 JBrowse link 16 28,605,587 28,623,586 RGD:11554173
G TAGLN transgelin JBrowse link 11 117,199,294 117,207,465 RGD:11554173
G TCF19 transcription factor 19 JBrowse link 6 31,158,589 31,164,215 RGD:11554173
G TCF7L2 transcription factor 7 like 2 JBrowse link 10 112,950,247 113,167,678 RGD:11554173
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,606,472 30,694,142 RGD:11554173
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:11554173
G TNFRSF10A TNF receptor superfamily member 10a JBrowse link 8 23,190,452 23,225,102 RGD:11554173
G TNFRSF9 TNF receptor superfamily member 9 JBrowse link 1 7,915,871 7,941,607 RGD:11554173
G TNFSF10 TNF superfamily member 10 JBrowse link 3 172,505,508 172,523,430 RGD:11554173
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:11554173
RGD:8554872
G TP53BP1 tumor protein p53 binding protein 1 JBrowse link 15 43,403,061 43,510,640 RGD:11554173
G TPM3 tropomyosin 3 JBrowse link 1 154,155,304 154,192,100 RGD:11554173
G TRMT11 tRNA methyltransferase 11 homolog JBrowse link 6 125,986,430 126,079,728 RGD:11554173
G TYMP thymidine phosphorylase JBrowse link 22 50,525,752 50,530,085 RGD:11554173
G TYMS thymidylate synthetase JBrowse link 18 657,653 673,578 RGD:11554173
G UHRF1 ubiquitin like with PHD and ring finger domains 1 JBrowse link 19 4,903,080 4,962,154 RGD:9587430
G UMPS uridine monophosphate synthetase JBrowse link 3 124,730,366 124,749,273 RGD:11554173
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,770,209 43,786,487 RGD:5684533
RGD:11554173
G WT1 WT1 transcription factor JBrowse link 11 32,387,775 32,435,539 RGD:11554173
G XAF1 XIAP associated factor 1 JBrowse link 17 6,755,408 6,775,647 RGD:11554173
G XDH xanthine dehydrogenase JBrowse link 2 31,334,320 31,414,777 RGD:13210519
G YBX1 Y-box binding protein 1 JBrowse link 1 42,682,418 42,703,805 RGD:11554173
colorectal adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCB1 ATP binding cassette subfamily B member 1 JBrowse link 7 87,503,017 87,713,323 RGD:2312343
G ARPC2 actin related protein 2/3 complex subunit 2 JBrowse link 2 218,217,138 218,254,348 RGD:11049173
G BCL2L1 BCL2 like 1 JBrowse link 20 31,664,452 31,723,963 RGD:11353854
G BCL2L2 BCL2 like 2 JBrowse link 14 23,306,762 23,311,759 RGD:14394422
G BIRC7 baculoviral IAP repeat containing 7 JBrowse link 20 63,235,905 63,240,495 RGD:13217408
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:11567230
G BRD8 bromodomain containing 8 JBrowse link 5 138,139,770 138,178,669 RGD:9587763
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,139,168 35,232,402 RGD:2289356
G DNMT3B DNA methyltransferase 3 beta JBrowse link 20 32,762,385 32,809,356 RGD:9589082
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:13210753
G GATA6 GATA binding protein 6 JBrowse link 18 22,169,437 22,202,528 RGD:13208874
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:13210767
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:14700996
G GSTT1 glutathione S-transferase theta 1 RGD:14700996
RGD:14701003
G HPCA hippocalcin JBrowse link 1 32,885,965 32,894,646 RGD:9693683
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:13210753
G KCNH1 potassium voltage-gated channel subfamily H member 1 JBrowse link 1 210,678,314 211,134,148 RGD:9693694
G KMT2B lysine methyltransferase 2B JBrowse link 19 35,717,818 35,738,880 RGD:9588601
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:13210782
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:13210782
G MAPK8 mitogen-activated protein kinase 8 JBrowse link 10 48,306,639 48,439,360 RGD:13217408
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 3 12,583,601 12,664,201 RGD:13217408
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:13210753
G TYMS thymidylate synthetase JBrowse link 18 657,653 673,578 RGD:2317418
G UTP23 UTP23 small subunit processome component JBrowse link 8 116,766,524 116,774,684 RGD:11041896
colorectal adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G BIRC7 baculoviral IAP repeat containing 7 JBrowse link 20 63,235,905 63,240,495 RGD:13217408
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:13210753
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:7495820
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:7495820
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:13210753
G MAPK8 mitogen-activated protein kinase 8 JBrowse link 10 48,306,639 48,439,360 RGD:13217408
RGD:13217413
G MIR224 microRNA 224 JBrowse link X 151,958,578 151,958,658 RGD:14398749
G ODC1 ornithine decarboxylase 1 JBrowse link 2 10,439,968 10,448,327 RGD:8554872
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 3 12,583,601 12,664,201 RGD:13217408
G TNFRSF1A TNF receptor superfamily member 1A JBrowse link 12 6,328,771 6,342,076 RGD:13217413
colorectal cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADGRB1 adhesion G protein-coupled receptor B1 JBrowse link 8 142,449,649 142,545,009 RGD:13831353
G AKAP9 A-kinase anchoring protein 9 JBrowse link 7 91,940,862 92,112,908 RGD:8554872
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:1643334
RGD:8554872
RGD:13592920
RGD:13209139
G AKT2 AKT serine/threonine kinase 2 JBrowse link 19 40,230,317 40,285,531 RGD:2313394
G ANTXR1 ANTXR cell adhesion molecule 1 JBrowse link 2 69,013,144 69,249,327 RGD:9684945
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:13592920
RGD:8554872
G ARID1A AT-rich interaction domain 1A JBrowse link 1 26,696,015 26,782,104 RGD:8554872
G ATF7 activating transcription factor 7 JBrowse link 12 53,507,856 53,626,415 RGD:11055686
G AXIN2 axin 2 JBrowse link 17 65,528,563 65,561,648 RGD:13592920
RGD:8554872
G BAMBI BMP and activin membrane bound inhibitor JBrowse link 10 28,677,521 28,682,932 RGD:14390154
RGD:14390156
G BARHL2 BarH like homeobox 2 JBrowse link 1 90,711,539 90,717,302 RGD:14392684
G BCL10 BCL10 immune signaling adaptor JBrowse link 1 85,265,776 85,276,632 RGD:8554872
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:8554872
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,315,480 32,399,672 RGD:8554872
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:11252105
RGD:11252117
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 2 110,637,528 110,678,107 RGD:1600539
RGD:13592920
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 15 40,161,009 40,221,136 RGD:13592920
G CASP9 caspase 9 JBrowse link 1 15,491,401 15,524,912 RGD:13210582
RGD:13210584
G CHEK2 checkpoint kinase 2 JBrowse link 22 28,687,743 28,741,866 RGD:2289706
RGD:8554872
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:2289840
RGD:13592920
RGD:8554872
G CTNNBL1 catenin beta like 1 JBrowse link 20 37,693,955 37,872,129 RGD:9850254
G CTPS2 CTP synthase 2 JBrowse link X 16,587,999 16,712,917 RGD:5132879
G CXCL5 C-X-C motif chemokine ligand 5 JBrowse link 4 73,995,642 73,998,677 RGD:5135268
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 JBrowse link 10 133,527,363 133,539,123 RGD:14700897
G DCC DCC netrin 1 receptor JBrowse link 18 52,340,172 53,535,899 RGD:8554872
RGD:13592920
G DLC1 DLC1 Rho GTPase activating protein JBrowse link 8 13,083,361 13,604,620 RGD:13592920
G DPYD dihydropyrimidine dehydrogenase JBrowse link 1 97,077,743 97,921,059 RGD:11251746
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 JBrowse link 6 8,073,360 8,102,548 RGD:10401218
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:5131871
RGD:5131455
RGD:5131632
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:13592920
G ERBB4 erb-b2 receptor tyrosine kinase 4 JBrowse link 2 211,375,717 212,538,802 RGD:2289977
G ESR2 estrogen receptor 2 JBrowse link 14 64,226,707 64,338,631 RGD:7364791
G F7 coagulation factor VII JBrowse link 13 113,105,773 113,120,685 RGD:11049532
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:13592920
RGD:8554872
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:13592920
RGD:8554872
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 9 98,807,670 98,850,081 RGD:8554872
RGD:13592920
G GCLC glutamate-cysteine ligase catalytic subunit JBrowse link 6 53,497,341 53,545,101 RGD:11049536
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:11353274
RGD:14700961
RGD:14700958
RGD:14700954
G GSTT1 glutathione S-transferase theta 1 RGD:11353274
RGD:14700995
RGD:14700986
RGD:14700954
G HDAC1 histone deacetylase 1 JBrowse link 1 32,292,083 32,333,628 RGD:9590193
G HDAC3 histone deacetylase 3 JBrowse link 5 141,620,876 141,636,856 RGD:9590193
G HDAC5 histone deacetylase 5 JBrowse link 17 44,076,753 44,123,651 RGD:9590193
G HDAC7 histone deacetylase 7 JBrowse link 12 47,782,722 47,820,612 RGD:9590193
G HFE homeostatic iron regulator JBrowse link 6 26,087,281 26,098,343 RGD:8694350
G HK1 hexokinase 1 JBrowse link 10 69,269,991 69,401,882 RGD:11353883
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 JBrowse link 6 32,659,467 32,666,657 RGD:14974237
G HNRNPK heterogeneous nuclear ribonucleoprotein K JBrowse link 9 83,968,083 83,980,782 RGD:9999439
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 1 244,850,297 244,864,543 RGD:9999439
G HSPA8 heat shock protein family A (Hsp70) member 8 JBrowse link 11 123,057,489 123,062,366 RGD:6480104
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:14975287
G KDM3B lysine demethylase 3B JBrowse link 5 138,352,685 138,437,027 RGD:9586735
G KDM4B lysine demethylase 4B JBrowse link 19 4,969,087 5,153,603 RGD:9587755
G KIF18A kinesin family member 18A JBrowse link 11 28,020,619 28,108,180 RGD:11554203
G KRAS KRAS proto-oncogene, GTPase JBrowse link 12 25,205,246 25,250,929 RGD:14398748
G L1CAM L1 cell adhesion molecule JBrowse link X 153,861,514 153,886,173 RGD:6483011
G LIG4 DNA ligase 4 JBrowse link 13 108,207,442 108,218,349 RGD:8694072
G MAPK9 mitogen-activated protein kinase 9 JBrowse link 5 180,233,143 180,292,083 RGD:13217416
G MIR200C microRNA 200c JBrowse link 12 6,963,699 6,963,766 RGD:13217416
G MIR224 microRNA 224 JBrowse link X 151,958,578 151,958,658 RGD:14398749
G MIR30B microRNA 30b JBrowse link 8 134,800,520 134,800,607 RGD:13432037
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:1625107
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,532 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:2293519
RGD:8554872
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:8554872
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:10412740
RGD:8554872
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
RGD:13592920
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
RGD:13592920
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta JBrowse link 1 9,629,889 9,729,114 RGD:13432038
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 5 68,215,737 68,301,821 RGD:13432046
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:8554872
RGD:13592920
G POLE DNA polymerase epsilon, catalytic subunit JBrowse link 12 132,623,758 132,687,519 RGD:8554872
RGD:13592920
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,485 12,434,356 RGD:8554872
G PTPN12 protein tyrosine phosphatase non-receptor type 12 JBrowse link 7 77,537,190 77,640,069 RGD:8554872
G PTPRJ protein tyrosine phosphatase receptor type J JBrowse link 11 47,980,504 48,170,839 RGD:8554872
G RAC1 Rac family small GTPase 1 JBrowse link 7 6,374,527 6,403,967 RGD:13432050
RGD:13432052
G RAD54B RAD54 homolog B JBrowse link 8 94,371,960 94,475,115 RGD:8554872
G RHOA ras homolog family member A JBrowse link 3 49,359,145 49,411,976 RGD:13432052
G SEMA4A semaphorin 4A JBrowse link 1 156,149,672 156,177,751 RGD:8554872
G SERPINA1 serpin family A member 1 JBrowse link 14 94,376,747 94,390,654 RGD:14695524
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:8554872
G SMAD7 SMAD family member 7 JBrowse link 18 48,919,853 48,950,711 RGD:13592920
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 37,344,685 37,405,432 RGD:13592920
G STAT3 signal transducer and activator of transcription 3 JBrowse link 17 42,313,324 42,388,502 RGD:13592920
G TCF3 transcription factor 3 JBrowse link 19 1,609,292 1,652,615 RGD:13432058
RGD:13432063
RGD:13432062
RGD:13432061
G TCF7L2 transcription factor 7 like 2 JBrowse link 10 112,950,247 113,167,678 RGD:13450926
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:13432086
RGD:13432088
G TGFB2 transforming growth factor beta 2 JBrowse link 1 218,345,284 218,444,619 RGD:13432081
RGD:13432086
G TGFB3 transforming growth factor beta 3 JBrowse link 14 75,958,061 75,983,011 RGD:13432088
G TNFSF9 TNF superfamily member 9 JBrowse link 19 6,531,026 6,535,924 RGD:2317353
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:13592920
RGD:8554872
G TRPV3 transient receptor potential cation channel subfamily V member 3 JBrowse link 17 3,510,502 3,557,812 RGD:7183081
G TXNIP thioredoxin interacting protein JBrowse link 1 145,992,435 145,996,579 RGD:1642760
G XPO5 exportin 5 JBrowse link 6 43,522,330 43,576,075 RGD:11041733
G XRCC2 X-ray repair cross complementing 2 JBrowse link 7 152,644,776 152,676,141 RGD:8554872
COLORECTAL CANCER 10 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G POLD1 DNA polymerase delta 1, catalytic subunit JBrowse link 19 50,384,291 50,418,018 RGD:8554872
RGD:7240710
colorectal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTR2 actin related protein 2 JBrowse link 2 65,227,695 65,271,253 RGD:11570560
G ACTR3 actin related protein 3 JBrowse link 2 113,889,934 113,962,596 RGD:11570560
G AGER advanced glycosylation end-product specific receptor JBrowse link 6 32,180,968 32,184,380 RGD:7245559
G AKAP12 A-kinase anchoring protein 12 JBrowse link 6 151,239,815 151,358,559 RGD:14348959
G ANTXR1 ANTXR cell adhesion molecule 1 JBrowse link 2 69,013,144 69,249,327 RGD:9684940
G BMI1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 10 22,321,099 22,331,484 RGD:1580058
G BRD7 bromodomain containing 7 JBrowse link 16 50,315,957 50,368,988 RGD:9586444
G CALU calumenin JBrowse link 7 128,739,359 128,773,400 RGD:2316232
G CBX7 chromobox 7 JBrowse link 22 39,130,772 39,152,680 RGD:9587355
G CD59 CD59 molecule (CD59 blood group) JBrowse link 11 33,703,010 33,736,479 RGD:1600485
G CHI3L1 chitinase 3 like 1 JBrowse link 1 203,178,931 203,186,704 RGD:4892637
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:11564625
RGD:14700936
G GSTT1 glutathione S-transferase theta 1 RGD:14700936
G HNRNPM heterogeneous nuclear ribonucleoprotein M JBrowse link 19 8,444,575 8,489,114 RGD:10054273
G ITGB3 integrin subunit beta 3 JBrowse link 17 47,253,842 47,312,711 RGD:5112894
G MBD4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link 3 129,430,944 129,440,179 RGD:9588975
G MSH3 mutS homolog 3 JBrowse link 5 80,654,652 80,876,815 RGD:1625103
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:1625103
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:14402406
G PSMB9 proteasome 20S subunit beta 9 JBrowse link 6 32,854,192 32,859,851 RGD:6483362
G STRAP serine/threonine kinase receptor associated protein JBrowse link 12 15,882,382 15,903,478 RGD:1581429
familial adenomatous polyposis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:11554173
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:2293188
RGD:8554872
RGD:11554173
RGD:1601201
RGD:1331525
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,139,168 35,232,402 RGD:11554173
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 JBrowse link 10 93,073,475 93,077,885 RGD:11554173
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:11554173
G F5 coagulation factor V JBrowse link 1 169,511,951 169,586,630 RGD:11554173
G FMO3 flavin containing dimethylaniline monoxygenase 3 JBrowse link 1 171,090,873 171,117,819 RGD:11554173
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 32,718,004 32,745,106 RGD:11554173
G HDAC2 histone deacetylase 2 JBrowse link 6 113,933,028 113,971,148 RGD:9590246
G IHH Indian hedgehog signaling molecule JBrowse link 2 219,054,424 219,060,921 RGD:11528847
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 JBrowse link 3 52,812,962 52,830,701 RGD:11554173
G LRG1 leucine rich alpha-2-glycoprotein 1 JBrowse link 19 4,536,402 4,540,036 RGD:11554173
G MCC MCC regulator of WNT signaling pathway JBrowse link 5 113,022,101 113,488,453 RGD:11554173
G MSH3 mutS homolog 3 JBrowse link 5 80,654,652 80,876,815 RGD:11554173
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:1600191
RGD:8554872
RGD:11554173
G NTHL1 nth like DNA glycosylase 1 JBrowse link 16 2,039,815 2,047,872 RGD:11554173
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:11554173
G REEP5 receptor accessory protein 5 JBrowse link 5 112,876,385 112,922,289 RGD:8554872
G SCG5 secretogranin V JBrowse link 15 32,641,613 32,697,098 RGD:8554872
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:11554173
G SRP19 signal recognition particle 19 JBrowse link 5 112,861,188 112,898,371 RGD:8554872
G TOE1 target of EGR1, exonuclease JBrowse link 1 45,339,751 45,343,973 RGD:8554872
familial adenomatous polyposis 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
RGD:7240710
G REEP5 receptor accessory protein 5 JBrowse link 5 112,876,385 112,922,289 RGD:8554872
G SRP19 signal recognition particle 19 JBrowse link 5 112,861,188 112,898,371 RGD:8554872
familial adenomatous polyposis 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MUTYH mutY DNA glycosylase JBrowse link 1 45,329,242 45,340,470 RGD:8554872
RGD:7240710
familial adenomatous polyposis 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NTHL1 nth like DNA glycosylase 1 JBrowse link 16 2,039,815 2,047,872 RGD:7240710
RGD:8554872
familial adenomatous polyposis 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MSH3 mutS homolog 3 JBrowse link 5 80,654,652 80,876,815 RGD:8554872
RGD:7240710
Gardner Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
hereditary desmoid disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
RGD:7240710
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:8554872
Hereditary Mixed Polyposis Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GREM1 gremlin 1, DAN family BMP antagonist JBrowse link 15 32,718,004 32,745,106 RGD:8554872
Hereditary Mixed Polyposis Syndrome 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SCG5 secretogranin V JBrowse link 15 32,641,613 32,697,098 RGD:8554872
Hereditary Mixed Polyposis Syndrome 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,755,786 86,927,969 RGD:8554872
RGD:7240710
hereditary nonpolyposis colorectal cancer type 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
RGD:11554173
RGD:7240710
hereditary nonpolyposis colorectal cancer type 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:8554872
RGD:7240710
G RB1 RB transcriptional corepressor 1 JBrowse link 13 48,303,747 48,481,890 RGD:8554872
hereditary nonpolyposis colorectal cancer type 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
RGD:7240710
hereditary nonpolyposis colorectal cancer type 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,606,472 30,694,142 RGD:7240710
RGD:8554872
hereditary nonpolyposis colorectal cancer type 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,532 RGD:8554872
RGD:7240710
hereditary nonpolyposis colorectal cancer type 8 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EPCAM epithelial cell adhesion molecule JBrowse link 2 47,369,311 47,387,020 RGD:8554872
RGD:7240710
Lynch syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 JBrowse link 7 6,009,245 6,023,834 RGD:8554872
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:11554173
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,139,168 35,232,402 RGD:11554173
G CYP2A7 cytochrome P450 family 2 subfamily A member 7 JBrowse link 19 40,875,439 40,885,951 RGD:8554872
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta JBrowse link 14 75,002,921 75,012,366 RGD:8554872
G EPCAM epithelial cell adhesion molecule JBrowse link 2 47,369,311 47,387,020 RGD:8554872
RGD:11554173
G EPM2AIP1 EPM2A interacting protein 1 JBrowse link 3 36,985,043 36,993,131 RGD:8554872
G FBXO11 F-box protein 11 JBrowse link 2 47,806,920 47,905,793 RGD:8554872
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:12792228
G GSTT1 glutathione S-transferase theta 1 RGD:12792228
G KCNK12 potassium two pore domain channel subfamily K member 12 JBrowse link 2 47,509,290 47,570,985 RGD:8554872
G LRRFIP2 LRR binding FLII interacting protein 2 JBrowse link 3 37,052,626 37,176,817 RGD:8554872
G MIR559 microRNA 559 JBrowse link 2 47,377,675 47,377,770 RGD:8554872
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:1625106
RGD:8554872
RGD:11554173
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,532 RGD:1600415
RGD:8554872
RGD:11554173
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:1625106
RGD:8554872
RGD:11554173
G MSH2-OT1 MSH2 overlapping transcript 1 JBrowse link 2 47,527,537 47,529,164 RGD:8554872
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:1625106
RGD:8554872
RGD:11554173
RGD:1600460
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 JBrowse link 2 189,763,859 189,784,339 RGD:8554872
G PMS1 PMS1 homolog 1, mismatch repair system component JBrowse link 2 189,784,085 189,877,629 RGD:1599137
RGD:8554872
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:1599137
RGD:8554872
RGD:11554173
RGD:1599142
G RNASEL ribonuclease L JBrowse link 1 182,573,634 182,589,285 RGD:2292000
G SMAD2 SMAD family member 2 JBrowse link 18 47,808,957 47,931,188 RGD:1599900
G SMAD3 SMAD family member 3 JBrowse link 15 67,065,602 67,195,195 RGD:1599900
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:1599900
G STPG4 sperm-tail PG-rich repeat containing 4 JBrowse link 2 47,086,991 47,155,308 RGD:8554872
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 99,104,038 99,154,192 RGD:2306282
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,606,472 30,694,142 RGD:11554173
RGD:8554872
G TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1 JBrowse link 3 36,826,817 36,945,662 RGD:8554872
Lynch syndrome 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EPCAM epithelial cell adhesion molecule JBrowse link 2 47,369,311 47,387,020 RGD:11554173
RGD:8554872
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
RGD:11554173
RGD:7240710
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
G PMS1 PMS1 homolog 1, mismatch repair system component JBrowse link 2 189,784,085 189,877,629 RGD:11554173
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:8554872
G RAD51D RAD51 paralog D JBrowse link 17 35,092,221 35,119,869 RGD:8554872
Muir-Torre syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FHIT fragile histidine triad diadenosine triphosphatase JBrowse link 3 59,747,277 61,251,461 RGD:13592920
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:7240710
RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
RGD:7240710
Oligodontia-Colorectal Cancer Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AXIN2 axin 2 JBrowse link 17 65,528,563 65,561,648 RGD:8554872
RGD:7240710
G GNA13 G protein subunit alpha 13 JBrowse link 17 65,009,289 65,056,740 RGD:8554872
G LINC02563 long intergenic non-protein coding RNA 2563 JBrowse link 17 65,457,541 65,458,408 RGD:8554872
G RGS9 regulator of G protein signaling 9 JBrowse link 17 65,137,370 65,227,703 RGD:8554872
rectal neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:11554173
G CDKN1B cyclin dependent kinase inhibitor 1B JBrowse link 12 12,717,270 12,722,383 RGD:11554173
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:11554173
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:13210759
G MAPK8 mitogen-activated protein kinase 8 JBrowse link 10 48,306,639 48,439,360 RGD:13217410
RGD:13217411
G MCC MCC regulator of WNT signaling pathway JBrowse link 5 113,022,101 113,488,453 RGD:11554173
G MTHFR methylenetetrahydrofolate reductase JBrowse link 1 11,785,723 11,806,103 RGD:6893664
G MUC2 mucin 2, oligomeric mucus/gel-forming JBrowse link 11 1,074,875 1,110,508 RGD:11554173
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:11554173
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:5685669
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta JBrowse link 3 138,652,698 138,834,928 RGD:13432031
G PMEPA1 prostate transmembrane protein, androgen induced 1 JBrowse link 20 57,648,392 57,711,536 RGD:2315108
G TYMS thymidylate synthetase JBrowse link 18 657,653 673,578 RGD:11554173
rectum adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
rectum cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:14975288
Sessile Serrated Polyposis Cancer Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RNF43 ring finger protein 43 JBrowse link 17 58,352,500 58,418,894 RGD:8554872
RGD:7240710
sigmoid colon cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
Somatic Colonic Adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD54L RAD54 like JBrowse link 1 46,247,688 46,278,477 RGD:8554872
Turcot Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:11554173
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
RGD:7240710
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
RGD:7240710
G MSH6 mutS homolog 6 JBrowse link 2 47,783,082 47,806,954 RGD:8554872
RGD:7240710
G PMS2 PMS1 homolog 2, mismatch repair system component JBrowse link 7 5,970,925 6,009,106 RGD:8554872
RGD:11554173
RGD:7240710

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16432
    disease of anatomical entity 15407
      gastrointestinal system disease 4199
        intestinal disease 1385
          rectal disease 809
            Colorectal Neoplasms 639
              Colonic Neoplasms + 284
              Lynch syndrome + 32
              Turcot Syndrome 5
              colorectal adenoma 11
              colorectal cancer + 219
              familial adenomatous polyposis + 26
              large bowel leiomyoma + 0
              rectal neoplasm + 14
Path 2
Term Annotations click to browse term
  disease 16432
    disease of cellular proliferation 6531
      Neoplasms by Site 5822
        Digestive System Neoplasms 1974
          Gastrointestinal Neoplasms 1835
            Intestinal Neoplasms 659
              Colorectal Neoplasms 639
                Colonic Neoplasms + 284
                Lynch syndrome + 32
                Turcot Syndrome 5
                colorectal adenoma 11
                colorectal cancer + 219
                familial adenomatous polyposis + 26
                large bowel leiomyoma + 0
                rectal neoplasm + 14
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.