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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Rickettsia Infections
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Accession:DOID:9007347 term browser browse the term
Definition:Infections by the genus RICKETTSIA.
Synonyms:exact_synonym: Rickettsia Infection
 primary_id: MESH:D012282
 xref: EFO:1001162



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Rickettsia Infections term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAPGEF3 Rap guanine nucleotide exchange factor 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:24218580 NCBI chr12:47,734,363...47,758,880
Ensembl chr12:47,734,363...47,771,040
JBrowse link
boutonneuse fever term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 IEP protein:increased expression:serum RGD PMID:3361150 RGD:11041575 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CFB complement factor B IEP protein:increased expression:serum RGD PMID:3361150 RGD:11041575 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 ISO RGD PMID:14507644 RGD:5135450 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497
JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 ISO RGD PMID:14507644 RGD:5135450 NCBI chr 4:76,001,275...76,007,509
Ensembl chr 4:76,001,275...76,007,509
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 40716
    disease by infectious agent 2735
      Bacterial Infections and Mycoses 1245
        bacterial infectious disease 1003
          Gram-Negative Bacterial Infections 207
            Rickettsiaceae Infections 5
              Rickettsia Infections 5
                spotted fever + 4
                typhus + 0
paths to the root