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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Renal Cell Carcinoma 1
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Accession:DOID:9006972 term browser browse the term
Synonyms:primary_id: MESH:C538557;   RDO:0004499


show annotations for term's descendants           Sort by:
Renal Cell Carcinoma 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4930550C14Rik RIKEN cDNA 4930550C14 gene ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:10571946 NCBI chr 9:53,313,814...53,345,726
Ensembl chr 9:53,313,625...53,345,702 		JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:18,050,963...18,109,060
Ensembl chr 6:18,050,963...18,109,060 		JBrowse link
G Atm ataxia telangiectasia mutated ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:10571946 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:17,637,009...17,666,971
Ensembl chr 6:17,636,233...17,666,971 		JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26822237 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Eloc elongin C ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26619011 NCBI chr 1:16,711,949...16,727,652
Ensembl chr 1:16,711,949...16,727,266 		JBrowse link
G LOC111674480 Cftr promoter region ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:18,169,701...18,171,127 JBrowse link
G Met met proto-oncogene ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:1104268 PMID:9140397 PMID:9326629 PMID:9536098 PMID:9563489 More... NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:18325052 PMID:21926548 PMID:24506336 PMID:24763289 PMID:25637381 More... NCBI chr17:87,979,960...88,031,141
Ensembl chr17:87,979,758...88,031,141 		JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:20190810 PMID:22729223 PMID:24631838 PMID:25599672 PMID:25741868 More... NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26619011 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985 		JBrowse link
G Nras neuroblastoma ras oncogene ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More... NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Prcc papillary renal cell carcinoma (translocation-associated) ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:25741868 NCBI chr 3:87,766,210...87,792,869
Ensembl chr 3:87,766,210...87,792,915 		JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:1945792 PMID:9467011 PMID:9915974 PMID:10866302 PMID:11051241 More... NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Rheb Ras homolog enriched in brain ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26619011 NCBI chr 5:25,007,821...25,047,359
Ensembl chr 5:25,007,821...25,047,622 		JBrowse link
G Sdhb succinate dehydrogenase complex, subunit B, iron sulfur (Ip) ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:18728283 PMID:19576851 PMID:22835832 PMID:24055113 PMID:24092654 More... NCBI chr 4:140,688,582...140,706,509
Ensembl chr 4:140,688,514...140,706,504 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26619011 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640 		JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:26619011 NCBI chr19:5,323,949...5,345,485
Ensembl chr19:5,323,960...5,345,483 		JBrowse link
G St7 suppression of tumorigenicity 7 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:17,693,579...17,943,022
Ensembl chr 6:17,692,932...17,943,024 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:253702 PMID:960674 PMID:1349175 PMID:1565143 PMID:1565144 More... NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:7563486 PMID:7660122 PMID:7728151 PMID:7784063 PMID:7977367 More... NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:28492532 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18301
    disease of cellular proliferation 7493
      cancer 5429
        cell type cancer 3732
          carcinoma 3199
            adenocarcinoma 1709
              renal cell carcinoma 359
                Renal Cell Carcinoma 1 24
Path 2
Term Annotations click to browse term
  disease 18301
    disease of cellular proliferation 7493
      Neoplasms by Site 6949
        Urogenital Neoplasms 2195
          Urologic Neoplasms 734
            urinary system cancer 683
              kidney cancer 480
                renal carcinoma 365
                  renal cell carcinoma 359
                    Renal Cell Carcinoma 1 24
paths to the root