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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Clostridium Infections
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Accession:DOID:9006732 term browser browse the term
Definition:Infections with bacteria of the genus CLOSTRIDIUM.
Synonyms:exact_synonym: Clostridium Infection;   Clostridium infectious disease;   commensal Clostridium infectious disease
 primary_id: MESH:D003015
 xref: EFO:1000874



show annotations for term's descendants           Sort by:
Clostridium Infections term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL27 interleukin 27 ISO associated with diarrhea;protein:increased expression:blood��serum, feces (human) RGD PMID:29140433 RGD:126790495 NCBI chr 6:18,243,988...18,248,369
Ensembl chr 6:18,244,040...18,247,635
JBrowse link
G MARCO macrophage receptor with collagenous structure exacerbates ISO RGD PMID:20810988 RGD:41412193 NCBI chr19:30,996,209...31,034,520
Ensembl chr19:30,996,347...31,034,487
JBrowse link
Clostridium difficile colitis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL23A interleukin 23 subunit alpha severity ISO RGD PMID:26455347 RGD:11097134 NCBI chr10:635,384...640,715
Ensembl chr10:638,719...640,359
JBrowse link
G IL33 interleukin 33 severity
treatment
ISO RGD PMID:32156806 RGD:40400894 NCBI chr11:27,219,878...27,256,723
Ensembl chr11:27,219,878...27,256,721
JBrowse link
gas gangrene term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSN gelsolin ISO protein:decreased expression:blood serum (human) RGD PMID:9142022 RGD:329333022 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15676
    disease by infectious agent 2162
      Bacterial Infections and Mycoses 1052
        bacterial infectious disease 798
          Gram-Positive Bacterial Infections 390
            Clostridium Infections 5
              Clostridium difficile colitis 2
              Enterotoxemia 0
              botulism + 0
              gas gangrene 1
              tetanus + 0
paths to the root