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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Periodontal Atrophy
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Accession:DOID:9005858 term browser browse the term
Definition:Degradation or wasting of the PERIODONTIUM tissues that may involve the gum (GINGIVA), the alveolar bone (ALVEOLAR PROCESS), the DENTAL CEMENTUM, or the PERIODONTAL LIGAMENT.
Synonyms:exact_synonym: Atrophy of Periodontium;   Gingivo Osseous Atrophy;   Gingivo-Osseous Atrophies;   Periodontal Atrophies;   Periodontium Atrophies;   Periodontium Atrophy
 primary_id: MESH:D055093;   RDO:0005672
For additional species annotation, visit the Alliance of Genome Resources.


GViewer not supported for chinchilla.
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Periodontal Atrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vegfa vascular endothelial growth factor A ISO protein:decreased expression:maxilla: RGD PMID:22716278 RGD:7421608 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
Alveolar Bone Loss term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated ISO CTD Direct Evidence: marker/mechanism CTD PMID:20630305 NCBI chrNW_004955452:1,820,212...1,873,877
Ensembl chrNW_004955452:1,820,174...1,874,226
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 ISO associated with Periodontitis; RGD PMID:21241302 RGD:8661687 NCBI chrNW_004955420:25,641,184...25,664,413 JBrowse link
G Il10 interleukin 10 treatment ISO associated with Diabetes Mellitus, Experimental RGD PMID:26270535 RGD:11049527 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:14630900 RGD:10413909 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Tnf tumor necrosis factor treatment ISO associated with Diabetes Mellitus, Experimental RGD PMID:26270535 RGD:11049527 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19249596 NCBI chrNW_004955518:431,401...462,063
Ensembl chrNW_004955518:430,642...462,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 12691
    Stomatognathic Diseases 890
      tooth disease 262
        periodontal disease 98
          Periodontal Atrophy 7
            Alveolar Bone Loss 6
            Periodontal Attachment Loss 0
            gingival recession 0
Path 2
Term Annotations click to browse term
  disease 12691
    disease of anatomical entity 12366
      nervous system disease 10316
        sensory system disease 4849
          mouth disease 676
            tooth disease 262
              periodontal disease 98
                Periodontal Atrophy 7
                  Alveolar Bone Loss 6
                  Periodontal Attachment Loss 0
                  gingival recession 0
paths to the root