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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Experimental Sarcoma
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Accession:DOID:9005474 term browser browse the term
Definition:Experimentally induced neoplasms of CONNECTIVE TISSUE in animals to provide a model for studying human SARCOMA.
Synonyms:exact_synonym: EHS Tumor;   Engelbreth-Holm-Swarm Sarcoma;   Experimental Sarcomas;   Jensen Sarcoma
 primary_id: MESH:D012513
For additional species annotation, visit the Alliance of Genome Resources.



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Experimental Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agps alkylglycerone phosphate synthase ISO RGD PMID:7407223 RGD:1598794 NCBI chr 2:75,662,477...75,761,694
Ensembl chr 2:75,662,521...75,761,694
JBrowse link
G Alb albumin IEP mRNA,protein:decreased expression:liver,serum: RGD PMID:1900492 RGD:11035284 NCBI chr 5:90,608,729...90,624,461
Ensembl chr 5:90,608,756...90,624,461
JBrowse link
G Epo erythropoietin ISO CTD Direct Evidence: therapeutic CTD PMID:9743294 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504
JBrowse link
G Ifng interferon gamma treatment IAGP RGD PMID:2119881 RGD:10755752 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog ISO A to T transversion; Gln to His substitution RGD PMID:11295286 RGD:1598680 NCBI chr 6:145,162,425...145,196,144
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Nras neuroblastoma ras oncogene ISO DNA:transversion:exon p.Q61L (human) RGD PMID:11295286 RGD:1598680 NCBI chr 3:102,965,601...102,975,230
Ensembl chr 3:102,965,601...102,975,230
JBrowse link
G Slc6a14 solute carrier family 6 (neurotransmitter transporter), member 14 ISO mRNA, protein:increased expression:brush border epithelial cell RGD PMID:17006743 RGD:1625275 NCBI chr  X:21,581,139...21,608,597
Ensembl chr  X:21,581,135...21,608,594
JBrowse link
Avian Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhob ras homolog family member B ISO RGD PMID:1710770 RGD:704375 NCBI chr12:8,547,661...8,550,009
Ensembl chr12:8,547,661...8,550,009
JBrowse link
Sarcoma, Yoshida term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase treatment ISO RGD PMID:8138551 RGD:11251753 NCBI chr 3:118,355,758...119,226,573
Ensembl chr 3:118,355,778...119,226,573
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15381
    disease of cellular proliferation 7272
      Experimental Neoplasms 522
        Experimental Sarcoma 9
          Avian Sarcoma 1
          Sarcoma 180 0
          Sarcoma 37 0
          Sarcoma, Yoshida 1
Path 2
Term Annotations click to browse term
  disease 15381
    disease of cellular proliferation 7272
      cancer 5352
        cell type cancer 3691
          sarcoma 258
            Experimental Sarcoma 9
              Avian Sarcoma 1
              Sarcoma 180 0
              Sarcoma 37 0
              Sarcoma, Yoshida 1
paths to the root