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ONTOLOGY REPORT - ANNOTATIONS


Term:Lentivirus Infections
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Accession:DOID:9005091 term browser browse the term
Definition:Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.
Synonyms:exact_synonym: Lentivirus Infection
 primary_id: MESH:D016180;   RDO:0005517
For additional species annotation, visit the Alliance of Genome Resources.


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acquired immunodeficiency syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl11 C-C motif chemokine ligand 11 JBrowse link NW_004936538 835,436 848,907 RGD:9068941
G Cd40lg CD40 ligand JBrowse link NW_004936513 10,607,617 10,620,403 RGD:9068941
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link NW_004936473 28,508,726 28,535,640 RGD:9068941
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link NW_004936617 4,224,131 4,239,080 RGD:9068941
G Cxcr1 C-X-C motif chemokine receptor 1 JBrowse link NW_004936569 715,129 716,187 RGD:9068941
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link NW_004936706 1,816,561 1,829,638 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004936545 6,139,130 6,144,543 RGD:9068941
G Igf2 insulin like growth factor 2 JBrowse link NW_004936816 972,902 981,232 RGD:9068941
G Il10 interleukin 10 JBrowse link NW_004936557 5,834,874 5,838,502 RGD:9068941
G Il2 interleukin 2 JBrowse link NW_004936662 1,594,953 1,599,625 RGD:9068941
G Il4r interleukin 4 receptor JBrowse link NW_004936501 11,025,590 11,058,807 RGD:9068941
G LOC101967308 bone marrow stromal antigen 2 JBrowse link NW_004936596 3,492,733 3,501,347 RGD:9068941
G Tlr3 toll like receptor 3 JBrowse link NW_004936554 3,370,766 3,388,125 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004936727 1,936,066 1,937,766 RGD:9068941
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link NW_004936709 1,407,327 1,421,448 RGD:9068941
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link NW_004936474 908,414 935,765 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004936512 5,741,836 5,800,999 RGD:9068941
AIDS Dementia Complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link NW_004936504 5,985,407 5,987,453 RGD:9068941
G Epo erythropoietin JBrowse link NW_004936543 742,722 745,332 RGD:9068941
G Gc GC vitamin D binding protein JBrowse link NW_004936598 3,220,029 3,256,091 RGD:9068941
G Il1b interleukin 1 beta JBrowse link NW_004936783 1,251,678 1,256,807 RGD:9068941
G Insr insulin receptor JBrowse link NW_004936588 4,345,306 4,453,380 RGD:9068941
G Irs1 insulin receptor substrate 1 JBrowse link NW_004936525 9,064,442 9,125,972 RGD:9068941
G Npy neuropeptide Y JBrowse link NW_004936478 1,289,437 1,296,819 RGD:9068941
G Oprm1 opioid receptor mu 1 JBrowse link NW_004936489 6,506,207 6,567,136 RGD:9068941
G Pdgfb platelet derived growth factor subunit B JBrowse link NW_004936492 2,353,840 2,368,573 RGD:9068941
AIDS-Associated Nephropathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr1 angiotensin II receptor type 1 JBrowse link NW_004936519 6,831,096 6,873,977 RGD:9068941
G Agtr2 angiotensin II receptor type 2 JBrowse link NW_004936479 13,252,678 13,255,570 RGD:9068941
G Egf epidermal growth factor JBrowse link NW_004936563 1,058,803 1,181,393 RGD:9068941
G LOC101976500 haptoglobin JBrowse link NW_004936475 21,841,054 21,845,821 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004936474 158,376 282,310 RGD:9068941
G Myh9 myosin heavy chain 9 JBrowse link NW_004936492 4,384,215 4,466,229 RGD:9068941
G Notch4 notch receptor 4 JBrowse link NW_004936727 1,386,842 1,409,823 RGD:9068941
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004936497 2,209,136 2,373,580 RGD:9068941
AIDS-Related Opportunistic Infections term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd4 CD4 molecule JBrowse link NW_004936709 997,776 1,022,791 RGD:9068941
HIV Encephalitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link NW_004936640 1,549,977 1,787,436 RGD:9068941
G Bace1 beta-secretase 1 JBrowse link NW_004936542 2,514,297 2,539,088 RGD:9068941
G Cdk5 cyclin dependent kinase 5 JBrowse link NW_004936527 6,478,934 6,483,848 RGD:9068941
G Mfn1 mitofusin 1 JBrowse link NW_004936566 3,737,315 3,775,894 RGD:9068941
HIV Seropositivity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aph1b aph-1 homolog B, gamma-secretase subunit JBrowse link NW_004936471 23,839,962 23,869,788 RGD:9068941
HIV Wasting Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il1a interleukin 1 alpha JBrowse link NW_004936783 1,210,715 1,218,315 RGD:9068941
G Il1b interleukin 1 beta JBrowse link NW_004936783 1,251,678 1,256,807 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004936727 1,936,066 1,937,766 RGD:9068941
HIV-Associated Lipodystrophy Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link NW_004936578 3,168,599 3,179,369 RGD:9068941
G Adrb3 adrenoceptor beta 3 JBrowse link NW_004936710 1,410,589 1,413,279 RGD:9068941
G Il18 interleukin 18 JBrowse link NW_004936612 2,306,963 2,325,086 RGD:9068941
G Lmna lamin A/C JBrowse link NW_004936580 5,374,208 5,395,442 RGD:9068941
G Mmp1 matrix metallopeptidase 1 JBrowse link NW_004936551 5,167,909 5,175,149 RGD:9068941
G Zmpste24 zinc metallopeptidase STE24 JBrowse link NW_004936474 22,035,059 22,077,846 RGD:9068941
human immunodeficiency virus infectious disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1 ATP binding cassette subfamily B member 1 JBrowse link NW_004936763 1,225,355 1,308,257 RGD:9068941
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link NW_004936535 3,956,490 3,985,002 RGD:9068941
G Adrb2 adrenoceptor beta 2 JBrowse link NW_004936504 5,985,407 5,987,453 RGD:9068941
G Alyref Aly/REF export factor JBrowse link NW_004936594 5,398,973 5,402,846 RGD:9068941
G Apoa1 apolipoprotein A1 JBrowse link NW_004936542 2,111,055 2,112,626 RGD:9068941
G Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 JBrowse link NW_004936504 12,490,838 12,514,256 RGD:9068941
G Arhgap4 Rho GTPase activating protein 4 JBrowse link NW_004936809 791,275 807,448 RGD:9068941
G Arhgdia Rho GDP dissociation inhibitor alpha JBrowse link NW_004936594 5,383,370 5,386,618 RGD:9068941
G Arhgdib Rho GDP dissociation inhibitor beta JBrowse link NW_004936587 2,471,344 2,549,765 RGD:9068941
G Bag3 BAG cochaperone 3 JBrowse link NW_004936486 8,985,871 9,007,461 RGD:9068941
G Bax BCL2 associated X, apoptosis regulator JBrowse link NW_004936664 2,968,103 2,973,652 RGD:9068941
G Birc2 baculoviral IAP repeat containing 2 JBrowse link NW_004936551 5,515,904 5,535,864 RGD:9068941
G Birc3 baculoviral IAP repeat containing 3 JBrowse link NW_004936551 5,544,047 5,556,550 RGD:9068941
G C3 complement C3 JBrowse link NW_004936588 3,985,732 4,023,221 RGD:9068941
G Ccl11 C-C motif chemokine ligand 11 JBrowse link NW_004936538 835,436 848,907 RGD:7240710
RGD:9068941
G Ccl5 C-C motif chemokine ligand 5 JBrowse link NW_004936490 253,279 259,947 RGD:9068941
G Ccr3 C-C motif chemokine receptor 3 JBrowse link NW_004936596 223,660 224,739 RGD:9068941
G Cct3 chaperonin containing TCP1 subunit 3 JBrowse link NW_004936580 5,537,338 5,554,384 RGD:9068941
G Cct5 chaperonin containing TCP1 subunit 5 JBrowse link NW_004936643 2,354,799 2,368,048 RGD:9068941
G Cct7 chaperonin containing TCP1 subunit 7 JBrowse link NW_004936491 17,017,687 17,033,526 RGD:9068941
G Cd28 CD28 molecule JBrowse link NW_004936631 335,411 363,407 RGD:9068941
G Cd40 CD40 molecule JBrowse link NW_004936514 6,936,915 6,947,246 RGD:9068941
G Cd40lg CD40 ligand JBrowse link NW_004936513 10,607,617 10,620,403 RGD:9068941
G Cdc42 cell division cycle 42 JBrowse link NW_004936474 7,556,765 7,598,687 RGD:9068941
G Cdkn1a cyclin dependent kinase inhibitor 1A JBrowse link NW_004936476 22,717,308 22,725,127 RGD:9068941
G Clic1 chloride intracellular channel 1 JBrowse link NW_004936727 1,797,966 1,803,401 RGD:9068941
G Cops6 COP9 signalosome subunit 6 JBrowse link NW_004936543 235,087 237,779 RGD:9068941
G Crp C-reactive protein JBrowse link NW_004936740 885,855 888,854 RGD:9068941
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link NW_004936473 28,508,726 28,535,640 RGD:7240710
RGD:9068941
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link NW_004936676 60,869 63,028 RGD:9068941
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link NW_004936617 4,224,131 4,239,080 RGD:7240710
RGD:9068941
G Cxcr1 C-X-C motif chemokine receptor 1 JBrowse link NW_004936569 715,129 716,187 RGD:7240710
RGD:9068941
G Dnajc7 DnaJ heat shock protein family (Hsp40) member C7 JBrowse link NW_004936490 16,842,901 16,878,717 RGD:9068941
G Eif3b eukaryotic translation initiation factor 3 subunit B JBrowse link NW_004936823 98,056 121,489 RGD:9068941
G Eif4a1 eukaryotic translation initiation factor 4A1 JBrowse link NW_004936595 851,731 858,225 RGD:9068941
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 JBrowse link NW_004936710 1,446,030 1,461,945 RGD:9068941
G Eif6 eukaryotic translation initiation factor 6 JBrowse link NW_004936561 5,471,113 5,477,679 RGD:9068941
G Emg1 EMG1 N1-specific pseudouridine methyltransferase JBrowse link NW_004936709 847,229 854,471 RGD:9068941
G Fas Fas cell surface death receptor JBrowse link NW_004936735 209,369 234,582 RGD:9068941
G Fcer2 Fc fragment of IgE receptor II JBrowse link NW_004936588 4,717,010 4,724,664 RGD:9068941
G Fcgr3a Fc fragment of IgG receptor IIIa JBrowse link NW_004937131 42,523 49,533 RGD:9068941
G Gadd45a growth arrest and DNA damage inducible alpha JBrowse link NW_004936591 3,998,359 4,001,491 RGD:9068941
G Gc GC vitamin D binding protein JBrowse link NW_004936598 3,220,029 3,256,091 RGD:9068941
G Grpel1 GrpE like 1, mitochondrial JBrowse link NW_004936477 18,883,556 18,891,108 RGD:9068941
G Gtf3a general transcription factor IIIA JBrowse link NW_004936472 22,671,277 22,683,748 RGD:9068941
G Hdgf heparin binding growth factor JBrowse link NW_004936580 5,899,277 5,909,309 RGD:9068941
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link NW_004936835 316,767 321,999 RGD:9068941
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link NW_004936476 15,830,459 15,836,994 RGD:9068941
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link NW_004936531 7,702,186 7,716,428 RGD:9068941
G Hspb1 heat shock protein family B (small) member 1 JBrowse link NW_004936543 2,110,351 2,111,896 RGD:9068941
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link NW_004936506 1,678,069 1,687,632 RGD:9068941
G Hsph1 heat shock protein family H (Hsp110) member 1 JBrowse link NW_004936472 25,855,873 25,879,062 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004936545 6,139,130 6,144,543 RGD:7240710
RGD:9068941
G Il10 interleukin 10 JBrowse link NW_004936557 5,834,874 5,838,502 RGD:7240710
RGD:9068941
G Il15 interleukin 15 JBrowse link NW_004936535 6,344,348 6,358,803 RGD:9068941
G Il18 interleukin 18 JBrowse link NW_004936612 2,306,963 2,325,086 RGD:9068941
G Il19 interleukin 19 JBrowse link NW_004936557 5,765,093 5,769,853 RGD:9068941
G Il2 interleukin 2 JBrowse link NW_004936662 1,594,953 1,599,625 RGD:9068941
G Il21r interleukin 21 receptor JBrowse link NW_004936501 11,100,170 11,112,112 RGD:9068941
G Il2ra interleukin 2 receptor subunit alpha JBrowse link NW_004936484 8,514,333 8,555,392 RGD:9068941
G Il4r interleukin 4 receptor JBrowse link NW_004936501 11,025,590 11,058,807 RGD:7240710
RGD:9068941
G Ilf2 interleukin enhancer binding factor 2 JBrowse link NW_004936580 3,464,870 3,472,242 RGD:9068941
G Ipo7 importin 7 JBrowse link NW_004936528 8,683,543 8,739,617 RGD:9068941
G Kmt2e lysine methyltransferase 2E JBrowse link NW_004936479 18,674,657 18,764,177 RGD:9068941
G Kpnb1 karyopherin subunit beta 1 JBrowse link NW_004936490 13,603,520 13,635,567 RGD:9068941
G Lck LCK proto-oncogene, Src family tyrosine kinase JBrowse link NW_004936474 15,293,115 15,314,072 RGD:9068941
G LOC101967308 bone marrow stromal antigen 2 JBrowse link NW_004936596 3,492,733 3,501,347 RGD:9068941
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain JBrowse link NW_004936727 540,225 544,968 RGD:9068941
G LOC101976500 haptoglobin JBrowse link NW_004936475 21,841,054 21,845,821 RGD:9068941
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link NW_004936496 2,578,598 2,698,165 RGD:9068941
G Map2 microtubule associated protein 2 JBrowse link NW_004936845 475,406 752,600 RGD:9068941
G Maz MYC associated zinc finger protein JBrowse link NW_004936501 12,664,861 12,668,819 RGD:9068941
G Mdm2 MDM2 proto-oncogene JBrowse link NW_004936545 6,709,903 6,732,334 RGD:9068941
G Mki67 marker of proliferation Ki-67 JBrowse link NW_004936486 15,561,327 15,587,109 RGD:9068941
G Mvb12a multivesicular body subunit 12A JBrowse link NW_004936596 3,478,142 3,481,968 RGD:9068941
G Myh9 myosin heavy chain 9 JBrowse link NW_004936492 4,384,215 4,466,229 RGD:9068941
G Nup88 nucleoporin 88 JBrowse link NW_004936677 2,385,289 2,417,398 RGD:9068941
G Nutf2 nuclear transport factor 2 JBrowse link NW_004936475 18,214,593 18,232,406 RGD:9068941
G Odc1 ornithine decarboxylase 1 JBrowse link NW_004936532 6,581,717 6,587,116 RGD:9068941
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link NW_004936602 3,411,106 3,418,826 RGD:9068941
G Oprm1 opioid receptor mu 1 JBrowse link NW_004936489 6,506,207 6,567,136 RGD:9068941
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Plaur plasminogen activator, urokinase receptor JBrowse link NW_004936706 840,968 855,552 RGD:9068941
G Ppib peptidylprolyl isomerase B JBrowse link NW_004936471 24,633,769 24,640,246 RGD:9068941
G Prf1 perforin 1 JBrowse link NW_004936521 8,057,874 8,060,695 RGD:9068941
G Prpf8 pre-mRNA processing factor 8 JBrowse link NW_004936538 7,780,022 7,814,575 RGD:9068941
G Psma4 proteasome 20S subunit alpha 4 JBrowse link NW_004936471 36,508,045 36,516,033 RGD:9068941
G Psma5 proteasome 20S subunit alpha 5 JBrowse link NW_004936704 905,277 928,364 RGD:9068941
G Psma6 proteasome 20S subunit alpha 6 JBrowse link NW_004936494 9,443,176 9,467,697 RGD:9068941
G Psmb10 proteasome 20S subunit beta 10 JBrowse link NW_004936475 18,290,055 18,293,035 RGD:9068941
G Psmb4 proteasome 20S subunit beta 4 JBrowse link NW_004936580 1,610,635 1,613,357 RGD:9068941
G Psmc3 proteasome 26S subunit, ATPase 3 JBrowse link NW_004936562 1,810,883 1,817,040 RGD:9068941
G Psmc5 proteasome 26S subunit, ATPase 5 JBrowse link NW_004936541 4,470,210 4,475,233 RGD:9068941
G Psmd13 proteasome 26S subunit, non-ATPase 13 JBrowse link NW_004936888 78,468 91,026 RGD:9068941
G Psmd3 proteasome 26S subunit, non-ATPase 3 JBrowse link NW_004936490 15,118,024 15,135,241 RGD:9068941
G Psmd6 proteasome 26S subunit, non-ATPase 6 JBrowse link NW_004936637 2,403,456 2,413,772 RGD:9068941
G Psmd8 proteasome 26S subunit, non-ATPase 8 JBrowse link NW_004936801 1,137,480 1,144,287 RGD:9068941
G Psme1 proteasome activator subunit 1 JBrowse link NW_004936722 405,491 408,277 RGD:9068941
G Psme2 proteasome activator subunit 2 JBrowse link NW_004936722 398,406 401,987 RGD:9068941
G Psme3 proteasome activator subunit 3 JBrowse link NW_004936490 17,542,933 17,549,347 RGD:9068941
G Psme4 proteasome activator subunit 4 JBrowse link NW_004936491 404,921 503,783 RGD:9068941
G Ptch1 patched 1 JBrowse link NW_004936626 4,241,993 4,301,919 RGD:9068941
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link NW_004936481 3,821,564 3,828,086 RGD:9068941
G Rab11b RAB11B, member RAS oncogene family JBrowse link NW_004936588 5,198,659 5,210,430 RGD:9068941
G Rab32 RAB32, member RAS oncogene family JBrowse link NW_004936489 35,620 51,809 RGD:9068941
G Ran RAN, member RAS oncogene family JBrowse link NW_004936660 1,669,352 1,673,972 RGD:9068941
G Ranbp1 RAN binding protein 1 JBrowse link NW_004936619 4,021,751 4,028,208 RGD:9068941
G Selp selectin P JBrowse link NW_004936481 17,076,660 17,112,501 RGD:9068941
G Sf3a3 splicing factor 3a subunit 3 JBrowse link NW_004936474 20,092,159 20,116,612 RGD:9068941
G Sfpq splicing factor proline and glutamine rich JBrowse link NW_004936474 17,776,490 17,791,966 RGD:9068941
G Sigmar1 sigma non-opioid intracellular receptor 1 JBrowse link NW_004936524 2,717,885 2,720,874 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004936521 10,296,097 10,316,673 RGD:9068941
G Slc11a1 solute carrier family 11 member 1 JBrowse link NW_004936569 888,309 895,991 RGD:9068941
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link NW_004936619 728,759 744,367 RGD:9068941
G Socs1 suppressor of cytokine signaling 1 JBrowse link NW_004936530 9,312,965 9,315,593 RGD:9068941
G Socs3 suppressor of cytokine signaling 3 JBrowse link NW_004936594 2,932,297 2,935,358 RGD:9068941
G Srf serum response factor JBrowse link NW_004936476 16,779,941 16,789,499 RGD:9068941
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link NW_004936490 5,055,258 5,059,118 RGD:9068941
G Srsf9 serine and arginine rich splicing factor 9 JBrowse link NW_004936668 484,922 491,576 RGD:9068941
G Taf9 TATA-box binding protein associated factor 9 JBrowse link NW_004936480 252,435 256,609 RGD:9068941
G Tlr3 toll like receptor 3 JBrowse link NW_004936554 3,370,766 3,388,125 RGD:7240710
RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004936727 1,936,066 1,937,766 RGD:9068941
G U2af1 U2 small nuclear RNA auxiliary factor 1 JBrowse link NW_004936500 937,537 967,791 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004936512 5,741,836 5,800,999 RGD:9068941
G Yy1 YY1 transcription factor JBrowse link NW_004936604 3,911,407 3,945,405 RGD:9068941

Term paths to the root
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Term Annotations click to browse term
  disease 11454
    disease by infectious agent 705
      viral infectious disease 431
        RNA Virus Infections 316
          Retroviridae Infections 156
            Lentivirus Infections 153
              Equine Infectious Anemia 0
              Feline Acquired Immunodeficiency Syndrome 0
              Progressive Interstitial Pneumonia of Sheep 0
              Simian Acquired Immunodeficiency Syndrome 0
              Visna 0
              human immunodeficiency virus infectious disease + 153
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.