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ONTOLOGY REPORT - ANNOTATIONS


Term:Lentivirus Infections
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Accession:DOID:9005091 term browser browse the term
Definition:Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.
Synonyms:exact_synonym: Lentivirus Infection
 primary_id: MESH:D016180;   RDO:0005517
For additional species annotation, visit the Alliance of Genome Resources.


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acquired immunodeficiency syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BST2 bone marrow stromal cell antigen 2 JBrowse link 20 45,383,757 45,387,420 RGD:9068941
G CCL4 chemokine (C-C motif) ligand 4 JBrowse link 9 37,681,342 37,682,691 RGD:9068941
G CCR5 C-C motif chemokine receptor 5 JBrowse link 20 42,293,288 42,297,952 RGD:9068941
G CD40LG CD40 ligand JBrowse link X 107,001,421 107,023,007 RGD:9068941
G CXCR1 chemokine (C-X-C motif) receptor 1 JBrowse link 37 24,862,129 24,866,069 RGD:9068941
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 1 110,173,781 110,191,612 RGD:9068941
G IFNG interferon gamma JBrowse link 10 10,406,866 10,411,698 RGD:9068941
G IGF2 insulin like growth factor 2 JBrowse link 18 46,294,036 46,311,982 RGD:9068941
G IL2 interleukin 2 JBrowse link 19 17,750,780 17,756,394 RGD:9068941
G IL4R interleukin 4 receptor JBrowse link 6 19,254,183 19,280,973 RGD:9068941
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:9068941
G TNFRSF1A TNF receptor superfamily member 1A JBrowse link 27 38,641,837 38,654,693 RGD:9068941
G TNFRSF1B TNF receptor superfamily member 1B JBrowse link 2 84,140,179 84,151,219 RGD:9068941
G VDR vitamin D receptor JBrowse link 27 6,852,915 6,909,466 RGD:9068941
AIDS Dementia Complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADRB2 adrenoceptor beta 2 JBrowse link 4 60,048,502 60,050,447 RGD:9068941
G EPO erythropoietin JBrowse link 6 8,994,211 8,995,954 RGD:9068941
G GC GC vitamin D binding protein JBrowse link 13 60,795,305 60,828,038 RGD:9068941
G IL1B interleukin 1 beta JBrowse link 17 37,019,329 37,033,388 RGD:9068941
G INSR insulin receptor JBrowse link 20 52,017,261 52,136,061 RGD:9068941
G IRS1 insulin receptor substrate 1 JBrowse link 25 39,624,554 39,687,991 RGD:9068941
G NPY neuropeptide Y JBrowse link 14 37,824,579 37,831,289 RGD:9068941
G OPRM1 opioid receptor mu 1 JBrowse link 1 43,972,915 44,037,477 RGD:9068941
G PDGFB platelet derived growth factor subunit B JBrowse link 10 25,798,877 25,819,422 RGD:9068941
AIDS-Associated Nephropathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGTR1 angiotensin II receptor type 1 JBrowse link 23 43,569,658 43,617,113 RGD:9068941
G AGTR2 angiotensin II receptor type 2 JBrowse link X 88,703,551 88,708,451 RGD:9068941
G EGF epidermal growth factor JBrowse link 32 30,073,541 30,166,904 RGD:9068941
G LOC479668 haptoglobin-like JBrowse link 5 77,795,183 77,800,034 RGD:9068941
G MTOR mechanistic target of rapamycin kinase JBrowse link 2 84,818,893 84,939,283 RGD:9068941
G MYH9 myosin heavy chain 9 JBrowse link 10 28,063,626 28,122,953 RGD:9068941
G NOTCH4 notch receptor 4 JBrowse link 12 1,585,249 1,608,721 RGD:9068941
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCL2 BCL2 apoptosis regulator JBrowse link 1 13,733,849 13,900,653 RGD:9068941
AIDS-Related Opportunistic Infections term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CD4 CD4 molecule JBrowse link 27 38,204,003 38,250,771 RGD:9068941
Coronary Artery Disease, Development of, in HIV term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCL2 C-C motif chemokine ligand 2 JBrowse link 9 39,008,187 39,009,932 RGD:9068941
HIV Encephalitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APP amyloid beta precursor protein JBrowse link 31 21,351,207 21,614,466 RGD:9068941
G BACE1 beta-secretase 1 JBrowse link 5 16,308,953 16,319,100 RGD:9068941
G CDK5 cyclin dependent kinase 5 JBrowse link 16 15,105,177 15,113,085 RGD:9068941
G MFN1 mitofusin 1 JBrowse link 34 12,785,799 12,816,881 RGD:9068941
HIV Seropositivity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALB albumin JBrowse link 13 62,133,747 62,169,349 RGD:9068941
G APH1B aph-1 homolog B, gamma-secretase subunit JBrowse link 30 27,852,784 27,887,618 RGD:9068941
G HLA-DRB1 MHC class II DLA DRB1 beta chain JBrowse link 12 2,151,409 2,164,564 RGD:9068941
HIV Wasting Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IL1A interleukin 1 alpha JBrowse link 17 36,969,581 36,979,445 RGD:9068941
G IL1B interleukin 1 beta JBrowse link 17 37,019,329 37,033,388 RGD:9068941
G IL6 interleukin 6 JBrowse link 14 36,474,268 36,478,519 RGD:9068941
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:9068941
HIV-Associated Lipodystrophy Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADIPOQ adiponectin, C1Q and collagen domain containing JBrowse link 34 19,398,310 19,410,519 RGD:9068941
G ADRB3 adrenoceptor beta 3 JBrowse link 16 27,445,601 27,446,796 RGD:9068941
G IL18 interleukin 18 JBrowse link 5 20,972,742 20,995,327 RGD:9068941
G LMNA lamin A/C JBrowse link 7 41,702,491 41,719,870 RGD:9068941
G MMP1 matrix metallopeptidase 1 JBrowse link 5 28,978,385 28,986,644 RGD:9068941
G ZMPSTE24 zinc metallopeptidase STE24 JBrowse link 15 2,669,546 2,708,480 RGD:9068941
human immunodeficiency virus infectious disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCB1 ATP binding cassette subfamily B member 1 JBrowse link 14 13,644,891 13,852,829 RGD:9068941
G ABCE1 ATP binding cassette subfamily E member 1 JBrowse link 15 43,781,838 43,813,529 RGD:9068941
G ADRB2 adrenoceptor beta 2 JBrowse link 4 60,048,502 60,050,447 RGD:9068941
G ALB albumin JBrowse link 13 62,133,747 62,169,349 RGD:9068941
G ALYREF Aly/REF export factor JBrowse link 9 398,207 402,787 RGD:9068941
G APOA1 apolipoprotein A1 JBrowse link 5 16,740,071 16,742,081 RGD:9068941
G ARAP3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 JBrowse link 2 36,614,799 36,639,281 RGD:9068941
G ARHGAP4 Rho GTPase activating protein 4 JBrowse link X 121,754,965 121,772,209 RGD:9068941
G ARHGDIA Rho GDP dissociation inhibitor alpha JBrowse link 9 419,350 422,284 RGD:9068941
G ARHGDIB Rho GDP dissociation inhibitor beta JBrowse link 27 31,662,817 31,681,951 RGD:9068941
G BAG3 BAG cochaperone 3 JBrowse link 28 29,792,612 29,815,466 RGD:9068941
G BAX BCL2 associated X, apoptosis regulator JBrowse link 1 107,423,388 107,426,464 RGD:9068941
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 5 29,294,080 29,314,837 RGD:9068941
G BIRC3 baculoviral IAP repeat containing 3 JBrowse link 5 29,324,893 29,343,322 RGD:9068941
G BST2 bone marrow stromal cell antigen 2 JBrowse link 20 45,383,757 45,387,420 RGD:9068941
G C3 complement C3 JBrowse link 20 53,566,226 53,598,365 RGD:9068941
G CCL2 C-C motif chemokine ligand 2 JBrowse link 9 39,008,187 39,009,932 RGD:7240710
RGD:9068941
G CCL4 chemokine (C-C motif) ligand 4 JBrowse link 9 37,681,342 37,682,691 RGD:9068941
G CCL5 C-C motif chemokine ligand 5 JBrowse link 9 37,817,409 37,823,852 RGD:9068941
G CCR2 C-C motif chemokine receptor 2 JBrowse link 20 42,305,344 42,313,258 RGD:9068941
G CCR3 C-C motif chemokine receptor 3 JBrowse link 20 42,382,380 42,398,449 RGD:9068941
G CCR5 C-C motif chemokine receptor 5 JBrowse link 20 42,293,288 42,297,952 RGD:9068941
G CCT3 chaperonin containing TCP1 subunit 3 JBrowse link 7 41,566,274 41,583,903 RGD:9068941
G CCT5 chaperonin containing TCP1 subunit 5 JBrowse link 34 4,035,851 4,049,131 RGD:9068941
G CD209 CD209 molecule JBrowse link 20 52,517,759 52,542,085 RGD:9068941
RGD:7240710
G CD28 CD28 molecule JBrowse link 37 12,503,849 12,536,362 RGD:9068941
G CD40 CD40 molecule JBrowse link 24 33,352,992 33,383,488 RGD:9068941
G CD40LG CD40 ligand JBrowse link X 107,001,421 107,023,007 RGD:9068941
G CDC42 cell division cycle 42 JBrowse link 2 77,153,276 77,169,947 RGD:9068941
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 12 5,746,898 5,755,103 RGD:9068941
G CLIC1 chloride intracellular channel 1 JBrowse link 12 1,209,777 1,215,229 RGD:9068941
G COPS6 COP9 signalosome subunit 6 JBrowse link 6 9,500,715 9,503,481 RGD:9068941
G CRP C-reactive protein JBrowse link 38 22,396,787 22,398,180 RGD:9068941
G CX3CR1 C-X3-C motif chemokine receptor 1 JBrowse link 23 8,937,069 8,954,738 RGD:7240710
RGD:9068941
G CXCL10 C-X-C motif chemokine ligand 10 JBrowse link 32 598,406 599,925 RGD:9068941
G CXCL12 C-X-C motif chemokine ligand 12 JBrowse link 28 2,895,916 2,903,543 RGD:7240710
RGD:9068941
G CXCR1 chemokine (C-X-C motif) receptor 1 JBrowse link 37 24,862,129 24,866,069 RGD:7240710
RGD:9068941
G DLA-64 MHC class I DLA-64 JBrowse link 12 983,573 986,969 RGD:9068941
G DLA-DRA MHC class II DR alpha chain JBrowse link 12 2,133,026 2,137,825 RGD:9068941
G DNAJC7 DnaJ heat shock protein family (Hsp40) member C7 JBrowse link 9 20,857,546 20,887,120 RGD:9068941
G EIF3B eukaryotic translation initiation factor 3 subunit B JBrowse link 6 14,780,318 14,802,938 RGD:9068941
G EIF4A1 eukaryotic translation initiation factor 4A1 JBrowse link 5 32,495,606 32,500,805 RGD:9068941
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 JBrowse link 16 27,389,850 27,410,154 RGD:9068941
G EIF6 eukaryotic translation initiation factor 6 JBrowse link 24 24,259,623 24,266,453 RGD:9068941
G EMG1 EMG1 N1-specific pseudouridine methyltransferase JBrowse link 27 38,069,089 38,075,577 RGD:9068941
G FAS Fas cell surface death receptor JBrowse link 26 38,738,811 38,763,298 RGD:9068941
G FCER2 Fc fragment of IgE receptor II JBrowse link 20 52,451,637 52,460,045 RGD:9068941
G GADD45A growth arrest and DNA damage inducible alpha JBrowse link 6 77,393,026 77,396,473 RGD:9068941
G GC GC vitamin D binding protein JBrowse link 13 60,795,305 60,828,038 RGD:9068941
G GRPEL1 GrpE like 1, mitochondrial JBrowse link 3 59,124,116 59,131,541 RGD:9068941
G GTF3A general transcription factor IIIA JBrowse link 25 12,171,058 12,183,491 RGD:9068941
G HDGF heparin binding growth factor JBrowse link 7 41,244,740 41,247,919 RGD:9068941
G HLA-DRB1 MHC class II DLA DRB1 beta chain JBrowse link 12 2,151,409 2,164,564 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 8 70,091,203 70,096,107 RGD:9068941
G HSP90AB1 heat shock protein 90 alpha family class B member 1 JBrowse link 12 12,658,415 12,664,945 RGD:9068941
G HSPA9 heat shock protein family A (Hsp70) member 9 JBrowse link 11 26,122,917 26,142,458 RGD:9068941
G HSPB1 heat shock protein family B (small) member 1 JBrowse link 6 7,487,164 7,488,576 RGD:9068941
G HSPD1 heat shock protein family D (Hsp60) member 1 JBrowse link 37 7,010,421 7,025,912 RGD:9068941
G HSPH1 heat shock protein family H (Hsp110) member 1 JBrowse link 25 8,972,942 8,998,404 RGD:9068941
G IFNG interferon gamma JBrowse link 10 10,406,866 10,411,698 RGD:7240710
RGD:9068941
G IL10 interleukin 10 JBrowse link 7 5,933,285 5,937,057 RGD:7240710
RGD:9068941
G IL15 interleukin 15 JBrowse link 19 1,339,607 1,364,762 RGD:9068941
G IL18 interleukin 18 JBrowse link 5 20,972,742 20,995,327 RGD:9068941
G IL19 interleukin 19 JBrowse link 7 6,000,994 6,006,959 RGD:9068941
G IL2 interleukin 2 JBrowse link 19 17,750,780 17,756,394 RGD:9068941
G IL21R interleukin 21 receptor JBrowse link 6 19,181,846 19,217,915 RGD:9068941
G IL2RA interleukin 2 receptor subunit alpha JBrowse link 2 29,892,130 29,948,926 RGD:9068941
G IL4R interleukin 4 receptor JBrowse link 6 19,254,183 19,280,973 RGD:7240710
RGD:9068941
G IL6 interleukin 6 JBrowse link 14 36,474,268 36,478,519 RGD:9068941
G ILF2 interleukin enhancer binding factor 2 JBrowse link 7 43,403,136 43,410,378 RGD:9068941
G IPO7 importin 7 JBrowse link 21 32,692,206 32,748,140 RGD:9068941
G KMT2E lysine methyltransferase 2E JBrowse link 18 15,240,631 15,332,850 RGD:9068941
G KPNB1 karyopherin subunit beta 1 JBrowse link 9 24,004,191 24,031,370 RGD:9068941
G LCK LCK proto-oncogene, Src family tyrosine kinase JBrowse link 2 68,940,816 68,964,585 RGD:9068941
G LEPR leptin receptor JBrowse link 5 44,684,118 44,775,626 RGD:9068941
G LOC100856137 HLA class II histocompatibility antigen, DQ beta 2 chain JBrowse link 12 2,244,820 2,250,822 RGD:9068941
G LOC100856782 T-complex protein 1 subunit eta RGD:9068941
G LOC478984 low affinity immunoglobulin gamma Fc region receptor III JBrowse link 38 21,054,870 21,060,948 RGD:9068941
G LOC479668 haptoglobin-like JBrowse link 5 77,795,183 77,800,034 RGD:9068941
G LYN LYN proto-oncogene, Src family tyrosine kinase JBrowse link 29 7,367,617 7,448,862 RGD:9068941
G MAP2 microtubule associated protein 2 JBrowse link 37 17,316,899 17,611,360 RGD:9068941
G MAZ MYC associated zinc finger protein JBrowse link 6 17,867,491 17,870,108 RGD:9068941
G MBL2 mannose binding lectin 2 JBrowse link 4 29,419,886 29,424,377 RGD:9068941
G MDM2 MDM2 proto-oncogene JBrowse link 10 10,936,288 10,963,118 RGD:9068941
G MKI67 marker of proliferation Ki-67 JBrowse link 28 36,920,679 36,939,336 RGD:9068941
G MVB12A multivesicular body subunit 12A JBrowse link 20 45,365,850 45,370,114 RGD:9068941
G MYH9 myosin heavy chain 9 JBrowse link 10 28,063,626 28,122,953 RGD:9068941
G NUP88 nucleoporin 88 JBrowse link 5 31,366,213 31,389,780 RGD:9068941
G NUTF2 nuclear transport factor 2 JBrowse link 5 81,614,916 81,632,933 RGD:9068941
G ODC1 ornithine decarboxylase 1 JBrowse link 17 7,368,699 7,376,970 RGD:9068941
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 20 8,486,150 8,491,448 RGD:9068941
G OPRM1 opioid receptor mu 1 JBrowse link 1 43,972,915 44,037,477 RGD:9068941
G PLAUR plasminogen activator, urokinase receptor JBrowse link 1 111,476,804 111,490,876 RGD:9068941
G PPIB peptidylprolyl isomerase B JBrowse link 30 28,654,193 28,660,129 RGD:9068941
G PRF1 perforin 1 JBrowse link 4 21,497,865 21,502,429 RGD:9068941
G PRPF8 pre-mRNA processing factor 8 JBrowse link 9 45,797,882 45,827,365 RGD:9068941
G PSMA4 proteasome 20S subunit alpha 4 JBrowse link X 53,245,249 53,246,357 RGD:9068941
G PSMA5 proteasome 20S subunit alpha 5 JBrowse link 6 42,425,590 42,450,074 RGD:9068941
G PSMA6 proteasome 20S subunit alpha 6 JBrowse link 8 14,010,899 14,038,141 RGD:9068941
G PSMB10 proteasome 20S subunit beta 10 JBrowse link 5 81,560,750 81,563,571 RGD:9068941
G PSMB4 proteasome 20S subunit beta 4 JBrowse link 17 60,461,208 60,463,604 RGD:9068941
G PSMC3 proteasome 26S subunit, ATPase 3 JBrowse link 18 42,212,083 42,218,958 RGD:9068941
G PSMC5 proteasome 26S subunit, ATPase 5 JBrowse link 9 11,783,422 11,787,624 RGD:9068941
G PSMD13 proteasome 26S subunit, non-ATPase 13 JBrowse link 18 25,388,212 25,401,071 RGD:9068941
G PSMD3 proteasome 26S subunit, non-ATPase 3 JBrowse link 9 22,538,368 22,553,221 RGD:9068941
G PSMD6 proteasome 26S subunit, non-ATPase 6 JBrowse link 20 27,206,801 27,220,059 RGD:9068941
G PSMD8 proteasome 26S subunit, non-ATPase 8 JBrowse link 1 114,619,478 114,626,082 RGD:9068941
G PSME1 proteasome activator subunit 1 JBrowse link 8 4,131,197 4,134,001 RGD:9068941
G PSME2 proteasome activator subunit 2 JBrowse link 8 4,137,247 4,141,380 RGD:9068941
G PSME3 proteasome activator subunit 3 JBrowse link 9 20,185,997 20,193,320 RGD:9068941
G PSME4 proteasome activator subunit 4 JBrowse link 10 54,873,093 54,960,030 RGD:9068941
G PTCH1 patched 1 JBrowse link 1 71,246,750 71,309,036 RGD:9068941
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 7 19,668,079 19,674,903 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 20 52,955,949 52,966,279 RGD:9068941
G RAB32 RAB32, member RAS oncogene family JBrowse link 1 37,706,809 37,719,044 RGD:9068941
G RAN RAN, member RAS oncogene family JBrowse link 26 1,435,077 1,436,893 RGD:9068941
G RANBP1 RAN binding protein 1 JBrowse link 26 29,211,559 29,219,247 RGD:9068941
G SELP selectin P JBrowse link 7 28,956,428 28,997,266 RGD:9068941
G SERPINA1 serpin family A member 1 JBrowse link 8 63,388,498 63,400,377 RGD:9068941
G SF3A3 splicing factor 3a subunit 3 JBrowse link 15 4,595,812 4,620,565 RGD:9068941
G SFPQ splicing factor proline and glutamine rich JBrowse link 15 6,879,955 6,896,309 RGD:9068941
G SIGMAR1 sigma non-opioid intracellular receptor 1 JBrowse link 11 51,310,672 51,313,426 RGD:9068941
G SIRT1 sirtuin 1 JBrowse link 4 19,188,616 19,220,031 RGD:9068941
G SLC11A1 solute carrier family 11 member 1 JBrowse link 37 25,039,203 25,047,461 RGD:9068941
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide JBrowse link 26 28,247,878 28,263,519 RGD:9068941
G SOCS1 suppressor of cytokine signaling 1 JBrowse link 6 31,511,003 31,511,995 RGD:9068941
G SOCS3 suppressor of cytokine signaling 3 JBrowse link 9 2,859,267 2,859,944 RGD:9068941
G SRF serum response factor JBrowse link 12 11,664,441 11,673,846 RGD:9068941
G SRSF1 serine and arginine rich splicing factor 1 JBrowse link 9 32,692,517 32,696,325 RGD:9068941
G SRSF9 serine and arginine rich splicing factor 9 JBrowse link 26 16,363,275 16,369,699 RGD:9068941
G TAF9 TATA-box binding protein associated factor 9 JBrowse link 2 54,403,908 54,406,857 RGD:9068941
G TLR3 toll like receptor 3 JBrowse link 16 44,617,012 44,633,591 RGD:7240710
RGD:9068941
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:9068941
G U2AF1 U2 small nuclear RNA auxiliary factor 1 JBrowse link 31 37,263,265 37,276,710 RGD:9068941
G VDR vitamin D receptor JBrowse link 27 6,852,915 6,909,466 RGD:9068941
G YY1 YY1 transcription factor JBrowse link 8 68,539,511 68,572,796 RGD:9068941

Term paths to the root
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Term Annotations click to browse term
  disease 12112
    disease by infectious agent 773
      viral infectious disease 483
        RNA Virus Infections 346
          Retroviridae Infections 167
            Lentivirus Infections 164
              Equine Infectious Anemia 0
              Feline Acquired Immunodeficiency Syndrome 0
              Progressive Interstitial Pneumonia of Sheep 0
              Simian Acquired Immunodeficiency Syndrome 0
              Visna 0
              human immunodeficiency virus infectious disease + 164
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.