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ONTOLOGY REPORT - ANNOTATIONS


Term:Venous Thrombosis
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Accession:DOID:9003871 term browser browse the term
Definition:The formation or presence of a blood clot (THROMBUS) within a vein.
Synonyms:exact_synonym: DVT;   Deep Vein Thrombosis;   Deep Venous Thromboses;   Deep Venous Thrombosis;   Phlebothromboses;   Phlebothrombosis;   deep vein thromboses;   venous thromboses
 related_synonym: venous thrombosis, protection against;   venous thrombosis, susceptibility to
 primary_id: MESH:D020246
 alt_id: RDO:0005775
For additional species annotation, visit the Alliance of Genome Resources.


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Venous Thrombosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 JBrowse link 3 5,519,921 5,558,390 RGD:10449099
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:6903200
G Arvcf ARVCF, delta catenin family member JBrowse link 11 86,736,125 86,793,795 RGD:8554872
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2307053
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289709
RGD:8554872
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:11554173
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135275
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link 11 86,852,682 86,885,233 RGD:8554872
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:11554173
G F11 coagulation factor XI JBrowse link 16 50,179,458 50,201,644 RGD:11041768
G F12 coagulation factor XII JBrowse link 17 9,736,577 9,744,420 RGD:11041808
RGD:11041858
G F13a1 coagulation factor XIII A1 chain JBrowse link 17 28,504,650 28,680,015 RGD:1581032
RGD:8554872
RGD:11554173
RGD:10450745
G F13b coagulation factor XIII B chain JBrowse link 13 56,598,891 56,623,132 RGD:8554872
RGD:11554173
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:1580342
RGD:8554872
RGD:11554173
RGD:10449430
G F3 coagulation factor III, tissue factor JBrowse link 2 225,310,686 225,322,281 RGD:11554173
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:6893601
RGD:8554872
RGD:11554173
RGD:6893602
RGD:7394762
RGD:7394779
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:11041650
RGD:11554173
G F8 coagulation factor VIII JBrowse link 18 367,862 399,242 RGD:1582359
RGD:11554173
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:5688756
RGD:7207783
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:8554872
G Gnb1l G protein subunit beta 1 like JBrowse link 11 86,575,229 86,655,614 RGD:8554872
G Gp1bb glycoprotein Ib platelet subunit beta JBrowse link 11 86,520,992 86,522,169 RGD:8554872
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11352755
G Habp2 hyaluronan binding protein 2 JBrowse link 1 277,068,715 277,104,567 RGD:11353820
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1626365
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:1598472
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:8655957
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:2311092
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:2311092
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:11528540
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:1582295
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:8693342
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:10449376
RGD:11554173
RGD:10449391
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:11554173
G Klhl22 kelch-like family member 22 JBrowse link 11 87,646,489 87,718,808 RGD:8554872
G LOC102548901 protein Bop-like JBrowse link 12 6,230,524 6,231,398 RGD:8554872
G Med15 mediator complex subunit 15 JBrowse link 11 87,553,868 87,628,631 RGD:8554872
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:1582570
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2325775
RGD:1582570
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:2325775
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325775
RGD:1582648
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1580590
RGD:8554872
RGD:11554173
RGD:10449394
RGD:6893655
RGD:6893602
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:11533639
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:11541089
G Pi4ka phosphatidylinositol 4-kinase alpha JBrowse link 11 87,858,323 87,975,549 RGD:8554872
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M JBrowse link 13 90,759,260 90,762,957 RGD:11554173
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:11554173
RGD:8554872
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:11554173
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:11554173
G Proc protein C, inactivator of coagulation factors Va and VIIIa JBrowse link 18 24,918,402 24,928,822 RGD:1578515
RGD:8554872
RGD:11554173
RGD:11100014
RGD:11099990
RGD:11099989
RGD:11035247
RGD:1578391
G Pros1 protein S JBrowse link 7 1,206,648 1,288,140 RGD:9743896
RGD:8554872
G Ranbp1 RAN binding protein 1 JBrowse link 11 86,890,585 86,898,818 RGD:8554872
G Rtn4r reticulon 4 receptor JBrowse link 11 86,992,665 87,017,091 RGD:8554872
G Scarf2 scavenger receptor class F, member 2 JBrowse link 11 87,722,350 87,733,734 RGD:8554872
G Septin5 septin 5 JBrowse link 11 86,516,377 86,522,169 RGD:8554872
G Serpina10 serpin family A member 10 JBrowse link 6 127,500,014 127,508,470 RGD:8554872
RGD:11554173
G Serpina5 serpin family A member 5 JBrowse link 6 127,753,152 127,772,403 RGD:1580299
G Serpinc1 serpin family C member 1 JBrowse link 13 78,806,107 78,820,375 RGD:11035247
RGD:8554872
RGD:11554173
RGD:11035248
G Serpind1 serpin family D member 1 JBrowse link 11 87,913,814 87,924,880 RGD:8554872
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1580132
RGD:11060966
RGD:8547875
G Tango2 transport and golgi organization 2 homolog JBrowse link 11 86,793,959 86,840,556 RGD:8554872
G Tbx1 T-box transcription factor 1 JBrowse link 11 86,552,022 86,561,647 RGD:8554872
G Tbxa2r thromboxane A2 receptor JBrowse link 7 11,253,153 11,259,233 RGD:11059887
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:11060130
RGD:11554173
RGD:11060257
RGD:11060137
G Trmt2a tRNA methyltransferase 2 homolog A JBrowse link 11 86,885,671 86,890,482 RGD:8554872
G Txnrd2 thioredoxin reductase 2 JBrowse link 11 86,667,994 86,716,063 RGD:8554872
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7207783
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 JBrowse link 11 86,903,122 86,917,261 RGD:8554872
G Zim1 zinc finger, imprinted 1 JBrowse link 1 70,244,828 70,268,289 RGD:8554872
Budd-Chiari syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:7240710
RGD:8554872
RGD:11537993
RGD:15036813
RGD:14700661
RGD:14700660
G Insl6 insulin-like 6 JBrowse link 1 247,473,292 247,476,827 RGD:8554872
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:7240710
RGD:8554872
RGD:11554173
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:10449395
RGD:11537993
central retinal vein occlusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Proc protein C, inactivator of coagulation factors Va and VIIIa JBrowse link 18 24,918,402 24,928,822 RGD:11100028
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:5490120
Lower Extremity Deep Vein Thrombosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8548850
portal vein thrombosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:14985237
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:14985227
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:14696705
RGD:14696749
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:14696749
retinal vein occlusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:5490120
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:5490120
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:9491754
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:7387258
RGD:7394774
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:7394767
RGD:11554173
RGD:7394778
RGD:7394773
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:8655593
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:5490120
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:5490120
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:8686430
RGD:11554173
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 JBrowse link 13 90,722,945 90,753,338 RGD:5490120
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8657048
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:7387256
RGD:10449421
RGD:10449405
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:13592920
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:8547547
RGD:8547555
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547742
RGD:8547805
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8554901
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5490120
RGD:11554173
G Vegfb vascular endothelial growth factor B JBrowse link 1 222,237,000 222,242,786 RGD:5490120
thrombophlebitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pros1 protein S JBrowse link 7 1,206,648 1,288,140 RGD:1578677
G RT1-CE13 RT1 class I, locus CE13 RGD:7364924
venous tributary occlusion of retina term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:1582301
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8554903

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15502
    disease of anatomical entity 14856
      cardiovascular system disease 4237
        vascular disease 3277
          thrombosis 136
            Venous Thrombosis 83
              Budd-Chiari syndrome + 4
              Lower Extremity Deep Vein Thrombosis 1
              Postthrombotic Syndrome 0
              Upper Extremity Deep Vein Thrombosis 0
              portal vein thrombosis 4
              retinal vein occlusion + 19
              thrombophlebitis + 2
Path 2
Term Annotations click to browse term
  disease 15502
    disease of anatomical entity 14856
      cardiovascular system disease 4237
        vascular disease 3277
          Embolism and Thrombosis 155
            thrombosis 136
              Venous Thrombosis 83
                Budd-Chiari syndrome + 4
                Lower Extremity Deep Vein Thrombosis 1
                Postthrombotic Syndrome 0
                Upper Extremity Deep Vein Thrombosis 0
                portal vein thrombosis 4
                retinal vein occlusion + 19
                thrombophlebitis + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.