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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Yersinia Infections
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Accession:DOID:9003800 term browser browse the term
Definition:Infections with bacteria of the genus YERSINIA.
Synonyms:exact_synonym: Yersinia Infection
 primary_id: MESH:D015009
 xref: EFO:1001245

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plague term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR5 C-C motif chemokine receptor 5 resistance ISO DNA:polymorphism:cds:p.H184R (rat) RGD PMID:18703167 RGD:4890425 NCBI chr22:7,803,794...7,818,112 JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 ISO RGD PMID:21356370 RGD:5134954 NCBI chr 7:22,327,041...22,329,405
Ensembl chr 7:22,569,355...22,569,900
Ensembl chr 7:22,569,355...22,569,900 		JBrowse link
G ERAP2 endoplasmic reticulum aminopeptidase 2 ISO CTD Direct Evidence: therapeutic CTD PMID:36261521 NCBI chr 4:90,707,064...90,754,413
Ensembl chr 4:90,707,181...90,752,325 		JBrowse link
G IL17A interleukin 17A ISO mRNA,protein:increased expression:lymph node RGD PMID:20876291 RGD:4781452 NCBI chr17:20,314,082...20,319,917
Ensembl chr17:20,315,773...20,318,785 		JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:20565713 RGD:4142820 NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729 		JBrowse link
G MAVS mitochondrial antiviral signaling protein susceptibility ISO RGD PMID:25064677 RGD:40903046 NCBI chr 2:34,534,433...34,555,406
Ensembl chr 2:34,541,229...34,552,823 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15412
    disease by infectious agent 2094
      Bacterial Infections and Mycoses 1022
        bacterial infectious disease 784
          Gram-Negative Bacterial Infections 179
            Enterobacteriaceae Infections 42
              Yersinia Infections 6
                Yersinia Pseudotuberculosis Infections 0
                Yersinia enterocolitica infections 0
                plague + 6
paths to the root