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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Cecal Neoplasms
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Accession:DOID:9003694 term browser browse the term
Definition:Tumors or cancer of the CECUM.
Synonyms:exact_synonym: cecal neoplasm
 primary_id: MESH:D002430
 alt_id: RDO:0004892
 xref: EFO:0009255


show annotations for term's descendants           Sort by:
Cecal Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCND1 cyclin D1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:14688030 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474 		JBrowse link
G CTNNB1 catenin beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:14688030 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G KRAS KRAS proto-oncogene, GTPase EXP CTD Direct Evidence: marker/mechanism CTD PMID:14688030 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936 		JBrowse link
G KRT20 keratin 20 EXP CTD Direct Evidence: marker/mechanism CTD PMID:14688030 NCBI chr17:40,875,889...40,885,242
Ensembl chr17:40,875,889...40,885,242 		JBrowse link
G TP53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14688030 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
appendiceal neoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAXX death domain associated protein IAGP DNA:CNV: (human) RGD PMID:30962504 RGD:152025217 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016 		JBrowse link
G NAP1L1 nucleosome assembly protein 1 like 1 severity IEP mRNA:increased expression:appendix, mucosa (human) RGD PMID:16794389 RGD:9590083 NCBI chr12:76,036,585...76,084,685
Ensembl chr12:76,036,585...76,084,735 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 41189
    disease of anatomical entity 32344
      gastrointestinal system disease 8167
        intestinal disease 3516
          cecal disease 12
            Cecal Neoplasms 7
              appendiceal neoplasm + 2
              cecal benign neoplasm + 0
              cecum cancer + 0
Path 2
Term Annotations click to browse term
  disease 41189
    disease of anatomical entity 32344
      gastrointestinal system disease 8167
        Digestive System Neoplasms 4203
          Gastrointestinal Neoplasms 4069
            Intestinal Neoplasms 1953
              Cecal Neoplasms 7
                appendiceal neoplasm + 2
                cecal benign neoplasm + 0
                cecum cancer + 0
paths to the root