RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Col5a2
collagen type V alpha 2 chain
ISO
ClinVar Annotator: match by term: Telecanthus
ClinVar
PMID:25741868 PMID:28492532
NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
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Foxc1
forkhead box C1
ISO
associated with Axenfeld-Rieger Syndrome;DNA:deletion:cds:437-453del17(human)
RGD
PMID:17653043
RGD:12904051
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
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Kat6b
lysine acetyltransferase 6B
ISO
ClinVar Annotator: match by term: Telecanthus
ClinVar
PMID:25741868
NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316
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Adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18
ISO
ClinVar Annotator: match by term: Microcornea, myopic chorioretinal atrophy, and telecanthus
OMIM ClinVar
PMID:16199547 PMID:22686506 PMID:23818446 PMID:24874986 PMID:25741868 PMID:28492532 PMID:28512305 More...
NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
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Mid1
midline 1
ISO
ClinVar Annotator: match by term: OPITZ-G SYNDROME, TYPE I
OMIM ClinVar
PMID:9354791 PMID:11030761 PMID:12545276 PMID:15121778 PMID:15558842 PMID:17221865 PMID:18360914 PMID:18949047 PMID:20671548 PMID:21326312 PMID:23757202 PMID:25207814 PMID:25304119 PMID:25741868 PMID:25874572 PMID:27749392 PMID:28492532 PMID:29456483 PMID:32926417 More...
NCBI chr X:24,116,674...24,491,205
Ensembl chr X:24,120,293...24,248,353
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Specc1l
sperm antigen with calponin homology and coiled-coil domains 1-like
ISO
ClinVar Annotator: match by term: HYPERTELORISM WITH ESOPHAGEAL ABNORMALITY AND HYPOSPADIAS
ClinVar
PMID:25741868 PMID:30472488
NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all