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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Spontaneous Abortions
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Accession:DOID:9003281 term browser browse the term
Definition:Expulsion of the product of FERTILIZATION before completing the term of GESTATION and without deliberate interference.
Synonyms:exact_synonym: RPL;   RPRGL;   miscarriage;   miscarriages;   recurrent embryonic loss;   recurrent spontaneous abortion;   recurrent stillbirth;   spontaneous abortion;   tubal abortion;   tubal abortions
 related_synonym: PREGNANCY LOSS, RECURRENT, SUSCEPTIBILITY TO, 1;   PREGNANCY LOSS, RECURRENT, SUSCEPTIBILITY TO, 2;   PREGNANCY LOSS, RECURRENT, SUSCEPTIBILITY TO, 3;   RPRGL1;   RPRGL2;   RPRGL3;   recurrent fetal loss, susceptibility to
 primary_id: MESH:D000022
 alt_id: OMIM:614389;   OMIM:614390;   OMIM:614391;   RDO:0004689;   RDO:0016150;   RDO:0016151;   RDO:0016152
For additional species annotation, visit the Alliance of Genome Resources.



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Spontaneous Abortions term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr  X:164,139,342...164,188,418
Ensembl chr  X:164,139,332...164,188,420
JBrowse link
G Ackr4 atypical chemokine receptor 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 9:104,097,682...104,126,643
Ensembl chr 9:104,084,157...104,126,933
JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:30,336,356...30,382,867
Ensembl chr13:30,336,441...30,382,867
JBrowse link
G Ahr aryl-hydrocarbon receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:26593447 NCBI chr12:35,497,979...35,534,989
Ensembl chr12:35,497,974...35,535,038
JBrowse link
G Alppl2 alkaline phosphatase, placental-like 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:87,086,690...87,095,934
Ensembl chr 1:87,086,694...87,089,928
JBrowse link
G Anxa5 annexin A5 susceptibility ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr 3:36,448,923...36,475,887
Ensembl chr 3:36,448,923...36,475,894
JBrowse link
G Apoe apolipoprotein E ISO CTD Direct Evidence: marker/mechanism CTD PMID:22266326 NCBI chr 7:19,696,244...19,701,310
Ensembl chr 7:19,696,109...19,699,188
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 3:95,434,367...95,497,240
Ensembl chr 3:95,434,388...95,497,240
JBrowse link
G Asic5 acid-sensing (proton-gated) ion channel family member 5 ISO ClinVar Annotator: match by term: Pregnancy loss, recurrent, susceptibility to, 3 ClinVar NCBI chr 3:81,982,293...82,021,233
Ensembl chr 3:81,982,290...82,021,233
JBrowse link
G Cbx3 chromobox 3 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 6:51,470,154...51,483,704
Ensembl chr 6:51,470,360...51,483,704
JBrowse link
G Ccdc68 coiled-coil domain containing 68 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr18:69,924,858...69,969,488
Ensembl chr18:69,925,426...69,969,484
JBrowse link
G Ccl5 chemokine (C-C motif) ligand 5 ISO associated with Pregnancy in Diabetics;protein:decreased expression:serum RGD PMID:17924206 RGD:2307065 NCBI chr11:83,525,778...83,530,518
Ensembl chr11:83,525,778...83,530,518
JBrowse link
G Ccnb3 cyclin B3 ISO ClinVar Annotator: match by term: Pregnancy loss, recurrent, susceptibility to, 1 ClinVar NCBI chr  X:6,979,652...7,041,635
Ensembl chr  X:6,979,652...7,041,619
JBrowse link
G Cd163 CD163 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:124,304,636...124,330,529
Ensembl chr 6:124,304,656...124,330,527
JBrowse link
G Cd164 CD164 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:41,519,500...41,531,042
Ensembl chr10:41,519,414...41,531,048
JBrowse link
G Cd226 CD226 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr18:89,176,954...89,272,232
Ensembl chr18:89,176,967...89,272,229
JBrowse link
G Cd68 CD68 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:69,664,213...69,666,170
Ensembl chr11:69,664,213...69,666,153
JBrowse link
G Cd69 CD69 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:129,267,324...129,275,375
Ensembl chr 6:129,267,325...129,275,436
JBrowse link
G Cd7 CD7 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:121,036,747...121,039,478
Ensembl chr11:121,036,747...121,039,418
JBrowse link
G Cd82 CD82 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:20075392 NCBI chr 2:93,419,102...93,462,950
Ensembl chr 2:93,419,111...93,463,140
JBrowse link
G Cd84 CD84 antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:171,839,697...171,890,718
Ensembl chr 1:171,839,697...171,890,718
JBrowse link
G Cd8a CD8 antigen, alpha chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:71,373,427...71,379,171
Ensembl chr 6:71,373,427...71,379,173
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Cenph centromere protein H ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr13:100,759,674...100,775,903
Ensembl chr13:100,759,674...100,775,899
JBrowse link
G Chia1 chitinase, acidic 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 3:106,113,382...106,132,118
Ensembl chr 3:106,113,229...106,132,120
JBrowse link
G Col13a1 collagen, type XIII, alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:61,838,234...61,979,206
Ensembl chr10:61,838,236...61,979,108
JBrowse link
G Col1a1 collagen, type I, alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:94,936,224...94,953,042
Ensembl chr11:94,936,224...94,953,042
JBrowse link
G Col1a2 collagen, type I, alpha 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:4,505,618...4,541,543
Ensembl chr 6:4,504,814...4,541,544
JBrowse link
G Col4a6 collagen, type IV, alpha 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr  X:141,165,403...141,474,095
Ensembl chr  X:141,165,403...141,474,076
JBrowse link
G Col5a1 collagen, type V, alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:27,886,381...28,039,510
Ensembl chr 2:27,886,425...28,039,514
JBrowse link
G Col5a2 collagen, type V, alpha 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:45,374,331...45,503,282
Ensembl chr 1:45,374,321...45,503,282
JBrowse link
G Col6a1 collagen, type VI, alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:76,708,792...76,726,044
Ensembl chr10:76,708,792...76,726,168
JBrowse link
G Col6a3 collagen, type VI, alpha 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:90,766,860...90,844,001
Ensembl chr 1:90,765,923...90,843,971
JBrowse link
G Col9a2 collagen, type IX, alpha 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 4:121,039,566...121,055,325
Ensembl chr 4:121,039,385...121,055,322
JBrowse link
G Crisp3 cysteine-rich secretory protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr17:40,221,777...40,242,288
Ensembl chr17:40,221,777...40,242,288
JBrowse link
G Csf3 colony stimulating factor 3 (granulocyte) ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:98,700,183...98,703,631
Ensembl chr11:98,701,263...98,703,629
JBrowse link
G Csrnp3 cysteine-serine-rich nuclear protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:65,845,284...66,036,614
Ensembl chr 2:65,845,767...66,031,546
JBrowse link
G Cxcl10 chemokine (C-X-C motif) ligand 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 5:92,346,638...92,348,889
Ensembl chr 5:92,346,638...92,348,889
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 PMID:26593447 NCBI chr 9:57,687,928...57,703,824
Ensembl chr 9:57,687,928...57,703,824
JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:170,482,957...170,497,145
Ensembl chr 2:170,482,708...170,497,145
JBrowse link
G Dhfr dihydrofolate reductase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:92,354,783...92,389,053
Ensembl chr13:92,354,726...92,389,053
JBrowse link
G Ecm1 extracellular matrix protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 3:95,734,147...95,739,876
Ensembl chr 3:95,734,147...95,739,569
JBrowse link
G Ecm2 extracellular matrix protein 2, female organ and adipocyte specific ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:49,504,810...49,532,789
Ensembl chr13:49,504,810...49,532,789
JBrowse link
G Emp1 epithelial membrane protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:135,362,550...135,383,173
Ensembl chr 6:135,362,545...135,383,173
JBrowse link
G F11 coagulation factor XI ISO protein:increased activity:blood: RGD PMID:25517908 RGD:11041767 NCBI chr 8:45,240,659...45,262,055
Ensembl chr 8:45,241,174...45,262,031
JBrowse link
G F12 coagulation factor XII (Hageman factor) ISO protein:decreased activity: : RGD PMID:24597288 RGD:11041799 NCBI chr13:55,417,958...55,426,804
Ensembl chr13:55,417,958...55,426,793
JBrowse link
G F13a1 coagulation factor XIII, A1 subunit IMP RGD PMID:12933578 RGD:10450744 NCBI chr13:36,867,178...37,050,244
Ensembl chr13:36,867,178...37,050,244
JBrowse link
G F2 coagulation factor II susceptibility ISO ClinVar Annotator: match by term: Pregnancy loss, recurrent, susceptibility to, 2
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:2222810 PMID:2429850 PMID:6305407 PMID:8696333 PMID:8896550 More... NCBI chr 2:91,612,397...91,636,457
Ensembl chr 2:91,625,320...91,636,414
JBrowse link
G F3 coagulation factor III IMP RGD PMID:12579195 RGD:1300308 NCBI chr 3:121,723,537...121,735,052
Ensembl chr 3:121,723,537...121,735,048
JBrowse link
G F5 coagulation factor V susceptibility ISO ClinVar Annotator: match by term: Pregnancy loss, recurrent, susceptibility to, 1
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:7586244 PMID:7803250 PMID:7877648 PMID:7910348 PMID:7911872 More... NCBI chr 1:164,151,835...164,220,277
Ensembl chr 1:164,151,838...164,220,277
JBrowse link
G Fetub fetuin beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr16:22,918,382...22,939,768
Ensembl chr16:22,918,334...22,939,778
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:126,034,658...126,091,185
Ensembl chr 2:126,034,658...126,091,185
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:140,658,198...140,671,476
Ensembl chr 2:140,650,914...140,671,469
JBrowse link
G Fn1 fibronectin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:71,585,473...71,653,280
Ensembl chr 1:71,585,520...71,653,200
JBrowse link
G Fst follistatin ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:114,452,262...114,458,989
Ensembl chr13:114,452,290...114,458,951
JBrowse link
G Gls glutaminase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:52,163,449...52,235,009
Ensembl chr 1:52,163,448...52,233,232
JBrowse link
G Habp2 hyaluronic acid binding protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr19:56,287,109...56,320,820
Ensembl chr19:56,287,137...56,320,822
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:101,077,968...101,081,188
Ensembl chr11:101,078,411...101,080,527
JBrowse link
G Ifi35 interferon-induced protein 35 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:101,448,412...101,458,701
Ensembl chr11:101,448,407...101,458,698
JBrowse link
G Ifi44 interferon-induced protein 44 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 3:151,730,922...151,749,910
Ensembl chr 3:151,730,922...151,749,960
JBrowse link
G Igf1 insulin-like growth factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:87,858,265...87,937,047
Ensembl chr10:87,858,265...87,937,042
JBrowse link
G Igf2 insulin-like growth factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:142,650,768...142,666,816
Ensembl chr 7:142,650,766...142,666,816
JBrowse link
G Igfbp1 insulin-like growth factor binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:7,197,787...7,202,546
Ensembl chr11:7,197,782...7,202,546
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:7,206,086...7,215,498
Ensembl chr11:7,206,086...7,213,923
JBrowse link
G Igfbp6 insulin-like growth factor binding protein 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr15:102,144,186...102,149,512
Ensembl chr15:102,144,362...102,149,511
JBrowse link
G Il11 interleukin 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:4,772,373...4,782,907
Ensembl chr 7:4,772,373...4,782,859
JBrowse link
G Il12b interleukin 12b ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:44,400,063...44,414,677
Ensembl chr11:44,400,063...44,414,033
JBrowse link
G Il16 interleukin 16 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:83,642,819...83,746,028
Ensembl chr 7:83,642,825...83,745,726
JBrowse link
G Il1b interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:129,364,569...129,371,164
Ensembl chr 2:129,364,570...129,371,139
JBrowse link
G Il20ra interleukin 20 receptor, alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:19,711,673...19,760,053
Ensembl chr10:19,712,570...19,760,053
JBrowse link
G Il24 interleukin 24 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:130,882,074...130,887,411
Ensembl chr 1:130,882,074...130,887,454
JBrowse link
G Il5ra interleukin 5 receptor, alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:106,710,375...106,749,037
Ensembl chr 6:106,710,357...106,749,037
JBrowse link
G Il6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 5:30,013,114...30,019,975
Ensembl chr 5:30,013,114...30,019,981
JBrowse link
G Il9 interleukin 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:56,479,277...56,482,257
Ensembl chr13:56,479,277...56,482,246
JBrowse link
G Inha inhibin alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:75,507,077...75,510,366
Ensembl chr 1:75,507,077...75,510,366
JBrowse link
G Itga2 integrin alpha 2 IAGP associated with Diabetes Mellitus, Insulin-Dependent; protein:altered expression:natural killer cell (mouse) RGD PMID:19321657 RGD:2307421 NCBI chr13:114,833,081...114,932,100
Ensembl chr13:114,833,081...114,932,100
JBrowse link
G Itgb4 integrin beta 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:115,974,725...116,008,412
Ensembl chr11:115,974,709...116,008,412
JBrowse link
G Itgb6 integrin beta 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:60,598,292...60,722,603
Ensembl chr 2:60,598,292...60,722,643
JBrowse link
G Jak2 Janus kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17989398 NCBI chr19:29,251,803...29,313,095
Ensembl chr19:29,251,828...29,313,080
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar PMID:16414944 PMID:22581653 PMID:25741868 PMID:34398675 NCBI chr 7:143,106,877...143,427,050
Ensembl chr 7:143,106,362...143,427,042
JBrowse link
G Klk10 kallikrein related-peptidase 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:43,781,054...43,785,410
Ensembl chr 7:43,781,035...43,785,410
JBrowse link
G Lama4 laminin, alpha 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:38,965,515...39,110,188
Ensembl chr10:38,965,515...39,110,188
JBrowse link
G Lcn11 lipocalin 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:25,777,017...25,780,279
Ensembl chr 2:25,777,017...25,780,279
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr14:47,373,860...47,386,167
Ensembl chr14:47,367,751...47,386,160
JBrowse link
G Lif leukemia inhibitory factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:4,257,568...4,272,514
Ensembl chr11:4,257,557...4,272,514
JBrowse link
G Map2 microtubule-associated protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:66,175,202...66,442,583
Ensembl chr 1:66,175,273...66,442,583
JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 5:30,814,606...30,866,106
Ensembl chr 5:30,814,641...30,866,106
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 ISO DNA:polymorphisms:multiple: RGD PMID:18927129 RGD:12910825 NCBI chr19:30,232,906...30,239,687
Ensembl chr19:30,232,942...30,239,687
JBrowse link
G Mgat2 mannoside acetylglucosaminyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr12:69,184,158...69,186,773
Ensembl chr12:69,184,157...69,186,770
JBrowse link
G Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:136,872,435...136,875,823
Ensembl chr 6:136,872,435...136,875,823
JBrowse link
G Mmp11 matrix metallopeptidase 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:75,923,221...75,932,502
Ensembl chr10:75,923,222...75,936,496
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499
JBrowse link
G Mmp15 matrix metallopeptidase 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 8:95,352,296...95,374,293
Ensembl chr 8:95,352,268...95,375,080
JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:128,790,910...128,800,827
Ensembl chr10:128,790,910...128,800,824
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 9:7,692,090...7,699,585
Ensembl chr 9:7,692,090...7,699,585
JBrowse link
G Muc4 mucin 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr16:32,735,886...32,782,391
Ensembl chr16:32,735,886...32,782,391
JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 9:49,502,129...49,799,393
Ensembl chr 9:49,502,136...49,798,925
JBrowse link
G Pcdha3 protocadherin alpha 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr18:36,946,088...37,187,663
Ensembl chr18:36,946,105...37,187,657
JBrowse link
G Pgf placental growth factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr12:85,166,637...85,177,785
Ensembl chr12:85,166,635...85,177,790
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 9:65,587,150...65,595,967
Ensembl chr 9:65,587,160...65,595,967
JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 ISO ClinVar Annotator: match by term: Pregnancy loss, recurrent, susceptibility to, 3 ClinVar NCBI chr 1:20,057,779...20,618,082
Ensembl chr 1:20,057,779...20,618,064
JBrowse link
G Plk1 polo like kinase 1 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 7:122,159,435...122,169,884
Ensembl chr 7:122,159,439...122,169,873
JBrowse link
G Prlr prolactin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr15:10,177,238...10,349,190
Ensembl chr15:10,177,238...10,349,180
JBrowse link
G Ptgis prostaglandin I2 (prostacyclin) synthase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:167,203,194...167,252,150
Ensembl chr 2:167,191,805...167,240,604
JBrowse link
G Pthlh parathyroid hormone-like peptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 6:147,252,109...147,264,013
Ensembl chr 6:147,252,101...147,264,183
JBrowse link
G Rbp4 retinol binding protein 4, plasma ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr19:38,116,620...38,125,321
Ensembl chr19:38,116,629...38,125,281
JBrowse link
G Rexo4 REX4, 3'-5' exonuclease ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 2:26,953,559...26,964,386
Ensembl chr 2:26,953,563...26,964,386
JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr16:17,130,138...17,132,383
Ensembl chr16:17,130,138...17,132,383
JBrowse link
G Serpinb3a serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:107,045,587...107,052,303
Ensembl chr 1:107,045,587...107,052,303
JBrowse link
G Serpinb3d serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:107,078,163...107,083,480
Ensembl chr 1:107,078,167...107,083,506
JBrowse link
G Spag5 sperm associated antigen 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:78,301,470...78,322,457
Ensembl chr11:78,301,529...78,322,457
JBrowse link
G Sst somatostatin ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr16:23,889,573...23,891,342
Ensembl chr16:23,889,573...23,890,958
JBrowse link
G Tfrc transferrin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr16:32,608,896...32,632,794
Ensembl chr16:32,608,920...32,632,794
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077
JBrowse link
G Tgfbi transforming growth factor, beta induced ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr13:56,609,586...56,639,359
Ensembl chr13:56,609,523...56,639,562
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 4:47,353,222...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
G Timp2 tissue inhibitor of metalloproteinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:118,301,061...118,355,411
Ensembl chr11:118,301,069...118,355,740
JBrowse link
G Timp3 tissue inhibitor of metalloproteinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr10:86,300,412...86,349,505
Ensembl chr10:86,300,372...86,349,506
JBrowse link
G Tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 3:27,317,077...27,339,665
Ensembl chr 3:27,317,028...27,342,427
JBrowse link
G Tnfsf13 tumor necrosis factor (ligand) superfamily, member 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr11:69,682,577...69,685,554
Ensembl chr11:69,682,846...69,685,784
JBrowse link
G Tnr tenascin R ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 1:159,523,729...159,931,729
Ensembl chr 1:159,523,769...159,931,729
JBrowse link
G Traf1 TNF receptor-associated factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18539642 NCBI chr 2:34,941,750...34,961,812
Ensembl chr 2:34,941,750...34,961,772
JBrowse link
Embryo Loss term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl12 chemokine (C-X-C motif) ligand 12 IMP associated with Diabetes Mellitus, Insulin-Dependent RGD PMID:18384776 RGD:2306554 NCBI chr 6:117,168,535...117,181,368
Ensembl chr 6:117,168,535...117,181,367
JBrowse link
G Gpx4 glutathione peroxidase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12566075 NCBI chr10:80,047,166...80,056,439
Ensembl chr10:80,047,166...80,056,439
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17008600 NCBI chr19:4,285,999...4,306,222
Ensembl chr19:4,286,001...4,306,222
JBrowse link
G Igf2 insulin-like growth factor 2 ISO DNA:methylation: : RGD PMID:18778817 RGD:5509951 NCBI chr 7:142,650,768...142,666,816
Ensembl chr 7:142,650,766...142,666,816
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:21920610 RGD:8655947 NCBI chr 9:50,554,700...50,581,841
Ensembl chr 9:50,554,827...50,581,840
JBrowse link
G Lcmt1 leucine carboxyl methyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17724024 NCBI chr 7:123,377,803...123,430,358
Ensembl chr 7:123,369,784...123,430,358
JBrowse link
G Lif leukemia inhibitory factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:23409146 NCBI chr11:4,257,568...4,272,514
Ensembl chr11:4,257,557...4,272,514
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 ISO ClinVar Annotator: match by term: Preimplantation embryonic lethality ClinVar NCBI chr 7:23,385,889...23,441,923
Ensembl chr 7:23,385,889...23,441,922
JBrowse link
G Parg poly (ADP-ribose) glycohydrolase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15591342 NCBI chr14:32,201,930...32,298,714
Ensembl chr14:32,201,949...32,297,550
JBrowse link
G Slc31a1 solute carrier family 31, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11391004 NCBI chr 4:62,360,583...62,391,769
Ensembl chr 4:62,360,727...62,391,769
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N ISO CTD Direct Evidence: marker/mechanism CTD PMID:16738225 NCBI chr10:95,515,162...95,545,658
Ensembl chr10:95,515,145...95,545,657
JBrowse link
Habitual Abortions term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO RGD PMID:19086990 RGD:11039490 NCBI chr 7:19,696,244...19,701,310
Ensembl chr 7:19,696,109...19,699,188
JBrowse link
G Cbx3 chromobox 3 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 6:51,470,154...51,483,704
Ensembl chr 6:51,470,360...51,483,704
JBrowse link
G Ccdc68 coiled-coil domain containing 68 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr18:69,924,858...69,969,488
Ensembl chr18:69,925,426...69,969,484
JBrowse link
G Cenph centromere protein H ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr13:100,759,674...100,775,903
Ensembl chr13:100,759,674...100,775,899
JBrowse link
G Creb5 cAMP responsive element binding protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30100398 NCBI chr 6:53,287,226...53,700,364
Ensembl chr 6:53,287,270...53,700,376
JBrowse link
G F5 coagulation factor V ISO ClinVar Annotator: match by term: ABORTION, SPONTANEOUS, RECURRENT ClinVar PMID:7586244 PMID:7803250 PMID:7877648 PMID:7910348 PMID:7911872 More... NCBI chr 1:164,151,835...164,220,277
Ensembl chr 1:164,151,838...164,220,277
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar PMID:16414944 PMID:22581653 PMID:25741868 PMID:34398675 NCBI chr 7:143,106,877...143,427,050
Ensembl chr 7:143,106,362...143,427,042
JBrowse link
G Mthfr methylenetetrahydrofolate reductase no_association ISO DNA:SNPs: :677C>T, 1298A>C (human)
DNA:SNP: :1298A>C (human)
RGD PMID:22047507 PMID:19906129 PMID:22882325 RGD:10449404, RGD:10449411, RGD:10449415 NCBI chr 4:148,039,077...148,059,562
Ensembl chr 4:148,039,077...148,059,551
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 9:65,587,150...65,595,967
Ensembl chr 9:65,587,160...65,595,967
JBrowse link
G Plk1 polo like kinase 1 ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 7:122,159,435...122,169,884
Ensembl chr 7:122,159,439...122,169,873
JBrowse link
G Rexo4 REX4, 3'-5' exonuclease ISO ClinVar Annotator: match by term: Recurrent spontaneous abortion ClinVar NCBI chr 2:26,953,559...26,964,386
Ensembl chr 2:26,953,563...26,964,386
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19110213 NCBI chr10:88,459,587...88,473,236
Ensembl chr10:88,459,569...88,473,236
JBrowse link
G Thbd thrombomodulin susceptibility ISO DNA:SNP: :1418C>T (human) RGD PMID:23954867 RGD:11038683 NCBI chr 2:148,404,471...148,408,188
Ensembl chr 2:148,404,466...148,408,188
JBrowse link
Preimplantation Embryonic Lethality 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tle6 transducin-like enhancer of split 6 ISO ClinVar Annotator: match by term: Preimplantation embryonic lethality 1 ClinVar
OMIM
PMID:25741868 PMID:26537248 NCBI chr10:81,590,904...81,601,185
Ensembl chr10:81,590,904...81,601,073
JBrowse link
Preimplantation Embryonic Lethality 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi6 peptidyl arginine deiminase, type VI ISO ClinVar Annotator: match by term: PREIMPLANTATION EMBRYONIC LETHALITY 2 ClinVar
OMIM
PMID:27545678 NCBI chr 4:140,727,355...140,742,643
Ensembl chr 4:140,727,355...140,742,643
JBrowse link
Threatened Abortion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pibf1 progesterone immunomodulatory binding factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15760377 NCBI chr14:99,099,424...99,254,899
Ensembl chr14:99,099,424...99,254,493
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14538
    disease of anatomical entity 14138
      Urogenital Diseases 4050
        Female Urogenital Diseases and Pregnancy Complications 2039
          Pregnancy Complications 568
            Spontaneous Abortions 138
              Embryo Loss + 13
              Habitual Abortions + 13
              Incomplete Abortion 0
              Missed Abortions 0
              Septic Abortions 0
              Threatened Abortion 1
              Veterinary Abortion + 0
paths to the root