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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Vaso-occlusive Crisis
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Accession:DOID:9003197 term browser browse the term
Definition:A common painful complication of sickle cell anemia in adolescents and adults.
Synonyms:exact_synonym: Hemoglobin SS disease with vasoocclusive crisis
 primary_id: RDO:9000347
For additional species annotation, visit the Alliance of Genome Resources.


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Vaso-occlusive Crisis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gstm1 glutathione S-transferase, mu 1 severity ISO associated with Anemia, Sickle Cell;DNA:deletion:: (human) RGD PMID:24840051 RGD:10450860 NCBI chr 3:108,012,250...108,017,973
Ensembl chr 3:108,012,255...108,017,973
JBrowse link
G Gstt1 glutathione S-transferase, theta 1 ISO associated with Anemia, Sickle Cell;DNA:deletion:: (human) RGD PMID:23590899 RGD:10450838 NCBI chr10:75,783,813...75,798,584
Ensembl chr10:75,783,813...75,798,584
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 susceptibility ISO associated with Anemia, Sickle Cell;DNA:promoter,exon: RGD PMID:20172753 RGD:11530044 NCBI chr19:30,232,906...30,239,687
Ensembl chr19:30,232,942...30,239,687
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell susceptibility ISO associated with Anemia, Sickle Cell;DNA:repeats:intron: RGD PMID:25263931 RGD:11533931 NCBI chr 5:24,364,816...24,384,474
Ensembl chr 5:24,364,810...24,384,474
JBrowse link
G Slc4a1 solute carrier family 4 (anion exchanger), member 1 ISO RGD PMID:23643401 RGD:11100023 NCBI chr11:102,348,820...102,365,281
Ensembl chr11:102,348,824...102,366,203
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 13481
    physical disorder 2493
      congenital hemolytic anemia 140
        sickle cell anemia 45
          Vaso-occlusive Crisis 5
Path 2
Term Annotations click to browse term
  disease 13481
    disease of anatomical entity 12962
      Hemic and Lymphatic Diseases 1986
        hematopoietic system disease 1577
          anemia 401
            normocytic anemia 182
              hemolytic anemia 182
                congenital hemolytic anemia 140
                  hemoglobinopathy 106
                    sickle cell anemia 45
                      Vaso-occlusive Crisis 5
paths to the root