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ONTOLOGY REPORT - ANNOTATIONS


Term:Herpesviridae Infections
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Accession:DOID:9002834 term browser browse the term
Definition:Virus diseases caused by the HERPESVIRIDAE.
Synonyms:exact_synonym: Herpesviridae Infection;   Herpesvirus Infection;   Herpesvirus Infections
 primary_id: MESH:D006566;   RDO:0005189
For additional species annotation, visit the Alliance of Genome Resources.


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Herpesviridae Infections term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129514
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891912
G Ccr2 C-C motif chemokine receptor 2 RGD:4144903
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:6483463
G Nectin1 nectin cell adhesion molecule 1 JBrowse link 8 48,094,233 48,198,499 RGD:11554173
G Scn8a sodium voltage-gated channel alpha subunit 8 JBrowse link 7 142,575,629 142,683,659 RGD:11554173
G Scn9a sodium voltage-gated channel alpha subunit 9 JBrowse link 3 52,583,953 52,664,209 RGD:11554173
AIDS-Related Kaposi Sarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
Alpha/Beta T-Cell Lymphopenia with Gamma/Delta T-Cell Expansion, Severe Cytomegalovirus Infection, and Autoimmunity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rag1 recombination activating 1 JBrowse link 3 91,206,394 91,217,491 RGD:7240710
RGD:8554872
Burkitt lymphoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A4galt alpha 1,4-galactosyltransferase (P blood group) JBrowse link 7 124,085,832 124,110,440 RGD:11554173
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:11554173
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:11554173
G Bcl2l2 Bcl2-like 2 JBrowse link 15 33,543,774 33,549,165 RGD:14394511
G Cct6b chaperonin containing TCP1 subunit 6B JBrowse link 10 70,069,479 70,118,194 RGD:11554173
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:11520790
G Ftcd formimidoyltransferase cyclodeaminase JBrowse link 20 12,806,957 12,820,466 RGD:11554173
G Gna13 G protein subunit alpha 13 JBrowse link 10 97,647,196 97,680,030 RGD:11554173
G Id3 inhibitor of DNA binding 3, HLH protein JBrowse link 5 154,489,603 154,491,172 RGD:11554173
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1601453
RGD:8554872
RGD:10059619
RGD:7240710
G Pbx1 PBX homeobox 1 JBrowse link 13 86,390,741 86,671,460 RGD:11554173
G Pc pyruvate carboxylase JBrowse link 1 219,759,157 219,859,854 RGD:11554173
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:11554173
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link 12 12,714,394 12,738,654 RGD:8554872
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:11554173
G Sall3 spalt-like transcription factor 3 JBrowse link 18 77,572,200 77,591,710 RGD:11554173
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:11554173
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:11554173
Cytomegalovirus Infections term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:7241836
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891916
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:5687156
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:6903267
RGD:4889482
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 JBrowse link 20 1,814,661 1,833,033 RGD:5144145
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:6219000
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:12904072
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:11554173
cytomegalovirus retinitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364815
G RT1-CE13 RT1 class I, locus CE13 RGD:7365106
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7394768
RGD:7394808
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:7394808
eczema herpeticum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480259
genital herpes term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4890015
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:8158034
G Il3 interleukin 3 JBrowse link 10 39,620,535 39,622,973 RGD:5686876
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:8661697
herpes simplex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771596
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7401276
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8549472
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:8547770
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:8655923
G Mbl1 mannose-binding lectin (protein A) 1 JBrowse link 16 18,736,154 18,742,193 RGD:8693727
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:8693725
RGD:8693727
G Nectin1 nectin cell adhesion molecule 1 JBrowse link 8 48,094,233 48,198,499 RGD:11554173
G Nectin2 nectin cell adhesion molecule 2 JBrowse link 1 80,631,449 80,666,617 RGD:11554173
G Rpl30 ribosomal protein L30 JBrowse link 7 73,213,538 73,216,431 RGD:11039399
Herpes Simplex Encephalitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771554
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:8698664
G Calca calcitonin-related polypeptide alpha JBrowse link 1 184,184,018 184,188,922 RGD:7240516
G Calcr calcitonin receptor JBrowse link 4 28,627,439 28,702,559 RGD:7240516
G Ccr2 C-C motif chemokine receptor 2 RGD:8661752
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:8551839
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:8661752
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:8657070
G Irf3 interferon regulatory factor 3 JBrowse link 1 100,992,244 100,997,202 RGD:11554173
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:8548806
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8547868
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8547867
RGD:8547868
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:8661706
G Ticam1 toll-like receptor adaptor molecule 1 JBrowse link 9 10,780,185 10,790,280 RGD:11554173
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:8553026
RGD:5130178
G Tlr3 toll-like receptor 3 JBrowse link 16 50,016,466 50,031,011 RGD:8554872
RGD:11554173
RGD:7240710
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:5130178
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130178
G Traf3 Tnf receptor-associated factor 3 JBrowse link 6 135,610,698 135,720,247 RGD:11554173
G Unc93b1 unc-93 homolog B1, TLR signaling regulator JBrowse link 1 219,172,987 219,183,941 RGD:11554173
Herpes Simplex Encephalitis 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tlr3 toll-like receptor 3 JBrowse link 16 50,016,466 50,031,011 RGD:8554872
G Unc93b1 unc-93 homolog B1, TLR signaling regulator JBrowse link 1 219,172,987 219,183,941 RGD:8554872
RGD:7240710
Herpes Simplex Encephalitis 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amn amnion associated transmembrane protein JBrowse link 6 135,724,455 135,731,896 RGD:8554872
G Traf3 Tnf receptor-associated factor 3 JBrowse link 6 135,610,698 135,720,247 RGD:8554872
RGD:7240710
Herpes Simplex Encephalitis 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ticam1 toll-like receptor adaptor molecule 1 JBrowse link 9 10,780,185 10,790,280 RGD:8554872
RGD:7240710
Herpes Simplex Encephalitis 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irf3 interferon regulatory factor 3 JBrowse link 1 100,992,244 100,997,202 RGD:7240710
RGD:8554872
herpes simplex virus keratitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771550
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8548890
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7483593
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:8551819
RGD:8551837
G Ccr6 C-C motif chemokine receptor 6 JBrowse link 1 53,063,380 53,087,519 RGD:7483593
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:8551819
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:8157603
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364834
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7401196
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:8549793
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:8549742
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:8661706
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:7794851
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:7794851
RGD:8552970
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:7794851
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7401196
RGD:8157603
herpes zoster term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:8663478
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:8663478
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:8663478
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:8663478
infectious mononucleosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:11049152
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:11049152
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:10450797
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:10450797
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11035288
Kaposi's sarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:8554872
RGD:11554173
RGD:7240710
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1331525
Kaposiform Hemangioendothelioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:8655667
G Gna14 G protein subunit alpha 14 JBrowse link 1 235,165,775 235,347,986 RGD:8554872
X-linked immunodeficiency with magnesium defect, Epstein-Barr virus infection, and neoplasia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Magt1 magnesium transporter 1 JBrowse link X 77,023,423 77,061,603 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15609
    disease by infectious agent 835
      viral infectious disease 521
        DNA Virus Infections 166
          Herpesviridae Infections 95
            Bell's palsy 0
            Cytomegalovirus Infections + 13
            Epstein-Barr Virus Infections + 24
            Infectious Bovine Rhinotracheitis 0
            Kaposi's sarcoma + 5
            Malignant Catarrh 0
            Marek Disease 0
            Pseudorabies 0
            Roseolovirus Infections + 0
            Varicella Zoster Encephalitis 0
            chickenpox + 0
            herpes simplex + 52
            herpes zoster + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.