RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Ark2c
arkadia C-terminal like ring finger ubiquitin ligase 2C
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
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Ark2n
arkadia N-terminal like PKA signaling regulator 2N
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,155,956...71,243,655
Ensembl chr18:71,157,700...71,243,482
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Atp5f1a
ATP synthase F1 subunit alpha
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
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Epg5
ectopic P-granules 5 autophagy tethering factor
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
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Haus1
HAUS augmin-like complex, subunit 1
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,275,417...71,286,626
Ensembl chr18:71,273,537...71,286,660
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Hdhd2
haloacid dehalogenase-like hydrolase domain containing 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,475,037...70,526,471
Ensembl chr18:70,474,926...70,526,470
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Ier3ip1-ps1
immediate early response 3 interacting protein 1, pseudogene 1
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:9536098 PMID:16972080 PMID:17576681 PMID:21835305 PMID:22991235 PMID:23771172 PMID:24138066 PMID:25741868 PMID:28492532 PMID:28711742 PMID:31264968 More...
NCBI chr 4:132,331,372...132,342,316
Ensembl chr 4:132,332,180...132,342,316
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Katnal2
katanin catalytic subunit A1 like 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,531,759...70,607,886
Ensembl chr18:70,531,754...70,608,082
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Loxhd1
lipoxygenase homology PLAT domains 1
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,818,276...70,969,983
Ensembl chr18:70,818,276...70,969,983
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Pias2
protein inhibitor of activated STAT, 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
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Pstpip2
proline-serine-threonine phosphatase-interacting protein 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,310,387...71,396,752
Ensembl chr18:71,311,020...71,395,709
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Setbp1
SET binding protein 1
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:72,190,542...72,551,272
Ensembl chr18:72,191,035...72,552,556
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Siglec15
sialic acid binding Ig-like lectin 15
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,507,773...71,521,722
Ensembl chr18:71,505,399...71,521,881
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Skor2
SKI family transcriptional corepressor 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342
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Slc14a1
solute carrier family 14 member 1 (Kidd blood group)
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,565,453...71,608,807
Ensembl chr18:71,565,454...71,595,146
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Slc14a2
solute carrier family 14 member 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:71,612,460...72,039,462
Ensembl chr18:71,612,460...71,792,968
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Smad2
SMAD family member 2
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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St8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome
ClinVar
PMID:28492532
NCBI chr18:70,736,632...70,802,537
Ensembl chr18:70,736,602...70,797,789
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Ier3ip1-ps1
immediate early response 3 interacting protein 1, pseudogene 1
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome 1
ClinVar OMIM
PMID:16972080 PMID:21835305 PMID:22991235 PMID:23771172 PMID:24138066 PMID:25741868 PMID:28492532 PMID:28711742 More...
NCBI chr 4:132,331,372...132,342,316
Ensembl chr 4:132,332,180...132,342,316
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Yipf5
Yip1 domain family, member 5
ISO
ClinVar Annotator: match by term: Microcephaly, epilepsy, and diabetes syndrome 2
OMIM ClinVar
PMID:25741868 PMID:33164986
NCBI chr18:32,123,814...32,159,752
Ensembl chr18:32,123,842...32,157,642
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all
Path 1
disease
21089
syndrome
10784
Microcephaly, Epilepsy, and Diabetes Syndrome
19
Microcephaly, Epilepsy, and Diabetes Syndrome 1
1
Microcephaly, Epilepsy, and Diabetes Syndrome 2
1
Path 2
disease
21089
Developmental Disease
18391
Congenital, Hereditary, and Neonatal Diseases and Abnormalities
18246
genetic disease
18183
monogenic disease
10160
autosomal genetic disease
9299
autosomal dominant disease
6170
complex cortical dysplasia with other brain malformations
1575
Malformations of Cortical Development, Group I
1362
microcephaly
1117
Microcephaly, Epilepsy, and Diabetes Syndrome
19
Microcephaly, Epilepsy, and Diabetes Syndrome 1
1
Microcephaly, Epilepsy, and Diabetes Syndrome 2
1