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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Teratozoospermia
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Accession:DOID:9002321 term browser browse the term
Definition:Presence of spermatozoa with abnormal morphology over 85 % in sperm.
Synonyms:exact_synonym: abnormal spermatozoa;   abnormal spermatozoas;   teratospermia;   teratospermias;   teratozoospermias
 primary_id: MESH:D000072660
For additional species annotation, visit the Alliance of Genome Resources.



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Teratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr11:54,362,712...54,461,316
Ensembl chr11:54,364,487...54,462,519
JBrowse link
G Nos3 nitric oxide synthase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29983398 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Ythdc2 YTH domain containing 2 ISO CTD Direct Evidence: therapeutic CTD PMID:34822792 NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023
JBrowse link
male infertility due to globozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90b1 heat shock protein 90 beta family member 1 ISS MouseDO NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788
JBrowse link
G Spata16 spermatogenesis associated 16 ISO ClinVar Annotator: match by term: Globozoospermia ClinVar PMID:17847006 PMID:24265589 PMID:25741868 PMID:28492532 PMID:29065458 NCBI chr 2:109,485,287...109,865,665
Ensembl chr 2:109,485,274...109,865,659
JBrowse link
oligoasthenoteratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agfg1 ArfGAP with FG repeats 1 ISS MouseDO NCBI chr 9:84,124,878...84,178,149
Ensembl chr 9:84,125,120...84,178,128
JBrowse link
G Cfap58 cilia and flagella associated protein 58 ISS MouseDO NCBI chr 1:246,802,681...246,911,363
Ensembl chr 1:246,802,665...246,911,374
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit ISS MouseDO NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659
JBrowse link
G Spata20 spermatogenesis associated 20 ISS MouseDO NCBI chr10:79,427,525...79,435,472
Ensembl chr10:79,427,528...79,434,368
JBrowse link
spermatogenic failure 6 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata16 spermatogenesis associated 16 ISO ClinVar Annotator: match by term: Globozoospermia OMIM
ClinVar
PMID:17847006 PMID:24265589 PMID:25741868 PMID:28492532 PMID:29065458 NCBI chr 2:109,485,287...109,865,665
Ensembl chr 2:109,485,274...109,865,659
JBrowse link
spermatogenic failure 9 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpy19l2 dpy-19 like 2 ISO ClinVar Annotator: match by term: Spermatogenic failure 9 OMIM
ClinVar
PMID:15533374 PMID:21397063 PMID:21397064 PMID:22653751 PMID:28492532 More... NCBI chr 8:23,062,592...23,181,817
Ensembl chr 8:23,063,115...23,181,798
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18145
    disease of anatomical entity 17519
      reproductive system disease 2856
        male reproductive system disease 1917
          male infertility 240
            Teratozoospermia 11
              male infertility due to globozoospermia + 3
              oligoasthenoteratozoospermia 4
Path 2
Term Annotations click to browse term
  disease 18145
    disease of anatomical entity 17519
      Urogenital Diseases 4704
        Female Urogenital Diseases and Pregnancy Complications 2227
          Female Urogenital Diseases 1847
            female reproductive system disease 1843
              infertility 323
                male infertility 240
                  Teratozoospermia 11
                    male infertility due to globozoospermia + 3
                    oligoasthenoteratozoospermia 4
paths to the root