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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Kidney Neoplasms
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Accession:DOID:9002265 term browser browse the term
Definition:Tumors or cancers of the KIDNEY.
Synonyms:exact_synonym: Kidney Neoplasm;   renal neoplasm;   renal neoplasms
 narrow_synonym: Mixed Epithelial Stromal Tumor of the Kidney
 primary_id: MESH:D007680
 alt_id: RDO:0002884
 xref: EFO:0003865;   EFO:1000381



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Kidney Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:22311042 NCBI chr 4:26,312,403...26,488,456 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO clear cell sarcoma of kidney;protein:increased serine phosphorylation:kidney RGD PMID:17646270 RGD:1643332 NCBI chr 6:137,534,810...137,555,131 JBrowse link
G Atp7b ATPase copper transporting beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:11509115 NCBI chr16:76,654,725...76,726,092 JBrowse link
G Aurka aurora kinase A ISO CTD Direct Evidence: marker/mechanism CTD PMID:18497064 NCBI chr 3:181,546,742...181,562,890 JBrowse link
G Axl Axl receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25551830 NCBI chr 1:90,392,864...90,424,123 JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26719535 NCBI chr16:6,453,126...6,461,952 JBrowse link
G Bcor BCL6 co-repressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:26098867 NCBI chr  X:13,282,431...13,402,254 JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO mRNA, protein:increased expression:kidney RGD PMID:11150435 RGD:2293109 NCBI chr10:103,567,369...103,580,069 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21813464 NCBI chr 4:69,329,772...69,476,931 JBrowse link
G Ccnd1 cyclin D1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21693435 NCBI chr 1:209,518,288...209,527,986 JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:21693435 NCBI chr 4:169,491,273...169,496,500 JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO protein:increased expression:kidney
DNA:loss of heterozygosity
RGD PMID:17369505 PMID:11037653 RGD:2289679, RGD:2289689 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISO protein:increased expression:kidney RGD PMID:17369505 RGD:2289679
G Chek2 checkpoint kinase 2 onset IEP protein:increased phosphorylation:kidney outer medulla outer stripe (rat) RGD PMID:22411272 RGD:10401643 NCBI chr12:51,448,838...51,481,159 JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15003126 NCBI chr 8:66,991,940...66,998,014 JBrowse link
G Dnm3 dynamin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr13:76,892,381...77,371,346 JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21813464 NCBI chr16:71,495,457...71,508,845 JBrowse link
G Eno2 enolase 2 ISO RGD PMID:18459456 RGD:2293736 NCBI chr 4:159,258,371...159,267,220 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:16771730 RGD:2289934 NCBI chr10:83,907,491...83,931,365 JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr15:44,210,124...44,230,785 JBrowse link
G Fignl1 fidgetin-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr14:86,368,670...86,381,728 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 severity ISO RGD PMID:11448916 RGD:2289948 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Gstm1 glutathione S-transferase mu 1 susceptibility ISO DNA:deletion RGD PMID:17617661 RGD:2293828 NCBI chr 2:198,338,005...198,346,007 JBrowse link
G Gstt1 glutathione S-transferase theta 1 susceptibility ISO DNA:deletion
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:20663906 PMID:17617661 RGD:2293828 NCBI chr20:12,856,068...12,873,020 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr 1:95,298,332...95,300,271 JBrowse link
G Hltf helicase-like transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:16762066 NCBI chr 2:102,549,724...102,609,492 JBrowse link
G Hpgds hematopoietic prostaglandin D synthase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr 4:94,368,426...94,397,931 JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO protein:increased expression:serum: RGD PMID:7686390 RGD:11520780 NCBI chr 8:27,829,688...27,841,618 JBrowse link
G Il2 interleukin 2 ISO CTD Direct Evidence: therapeutic CTD PMID:17105418 PMID:18298334 PMID:18625569 PMID:19409039 NCBI chr 2:121,932,968...121,937,672 JBrowse link
G Itgb2 integrin subunit beta 2 ISO RGD PMID:11907109 RGD:6907072 NCBI chr20:11,061,009...11,097,242 JBrowse link
G Kdr kinase insert domain receptor ISO RGD PMID:12036917 RGD:2301759 NCBI chr14:32,572,031...32,615,204 JBrowse link
G Kras KRAS proto-oncogene, GTPase IDA RGD PMID:9020896 RGD:11570401 NCBI chr 4:179,916,255...179,949,613 JBrowse link
G Kyat1 kynurenine aminotransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20663906 NCBI chr 3:33,857,407...33,891,153 JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21813464 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21813464 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO DNA:missense mutations:cds:multiple (human) RGD PMID:9140397 RGD:1600122 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO DNA:insertion:promoter:g.-1607insG (human) RGD PMID:19843588 RGD:7207056 NCBI chr 8:12,943,453...12,963,966 JBrowse link
G Ndrg1 N-myc downstream regulated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15341671 NCBI chr 7:100,573,526...100,614,902 JBrowse link
G Plau plasminogen activator, urokinase ISO protein:decreased expression:kidney (human) RGD PMID:18336603 RGD:7241213 NCBI chr15:3,505,485...3,511,987 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12664575 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21813464 NCBI chr 4:150,352,158...150,412,813 JBrowse link
G Ranbp1 RAN binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr11:96,246,912...96,255,145 JBrowse link
G Rassf1 Ras association domain family member 1 ISO RGD PMID:17325427 RGD:2291979 NCBI chr 8:117,103,665...117,114,805 JBrowse link
G Rassf5 Ras association domain family member 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25217643 NCBI chr13:42,637,513...42,703,024 JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO ClinVar Annotator: match by term: Renal neoplasm ClinVar PMID:19261679 PMID:22241717 PMID:25720320 PMID:25741868 PMID:28179334 More... NCBI chr 5:158,547,775...158,568,589 JBrowse link
G Slc22a1 solute carrier family 22 member 1 ISO mRNA:decreased expression:kidney RGD PMID:23228442 RGD:7243178 NCBI chr 1:50,624,339...50,651,437 JBrowse link
G Slc22a2 solute carrier family 22 member 2 ISO mRNA:decreased expression:kidney RGD PMID:23228442 RGD:7243178 NCBI chr 1:50,668,817...50,711,019 JBrowse link
G Slc22a3 solute carrier family 22 member 3 ISO mRNA:decreased expression:kidney RGD PMID:23228442 RGD:7243178 NCBI chr 1:50,783,218...50,872,358 JBrowse link
G Slc5a5 solute carrier family 5 member 5 ISO CTD Direct Evidence: therapeutic CTD PMID:12489024 NCBI chr16:18,546,709...18,556,698 JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr 1:50,043,323...50,050,168 JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO DNA:hypermethylation:promoter RGD PMID:15217927 RGD:2290419 NCBI chr 7:19,408,539...19,459,558 JBrowse link
G Tnfrsf10b TNF receptor superfamily member 10b ISO mRNA:decreased expression:kidney RGD PMID:10693703 RGD:2290497 NCBI chr15:51,249,883...51,278,091 JBrowse link
G Tnfrsf9 TNF receptor superfamily member 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25279216 NCBI chr 5:166,664,494...166,690,834 JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:16985049 NCBI chr 2:112,136,550...112,155,903 JBrowse link
G Top2a DNA topoisomerase II alpha disease_progression ISO RGD PMID:19539329 RGD:2315122 NCBI chr10:84,441,954...84,473,093 JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr 1:97,157,375...97,178,415 JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr15:51,156,728...51,159,629 JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:11438694 RGD:11570508 NCBI chr 3:32,367,434...32,416,565 JBrowse link
G Tsc2 TSC complex subunit 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11170505 PMID:12110509 PMID:21693435 NCBI chr10:14,125,679...14,160,317 JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T ISO CTD Direct Evidence: marker/mechanism CTD PMID:28321044 NCBI chr13:46,403,352...46,413,854 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO RGD PMID:12011999 RGD:2298799 NCBI chr13:84,462,731...84,489,404 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IEP
ISO
protein:decreased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:11880179 PMID:11880179 RGD:625549 NCBI chr 4:146,772,483...146,779,376 JBrowse link
atypical teratoid rhabdoid tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler ISO ClinVar Annotator: match by term: Atypical teratoid/rhabdoid tumor ClinVar PMID:7697714 PMID:8968741 PMID:18414213 PMID:22995991 PMID:24082139 More... NCBI chr  X:70,850,981...70,997,330 JBrowse link
G Gpc3 glypican 3 ISO protein:increased expression:brain (human) RGD PMID:23530909 RGD:243065128 NCBI chr  X:136,789,770...137,157,598 JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 ISS
ISO
OMIM:609322
ClinVar Annotator: match by term: Teratoid tumor, atypical
MouseDO
ClinVar
PMID:25741868 NCBI chr20:12,740,105...12,763,054 JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Atypical teratoid/rhabdoid tumor ClinVar PMID:1565143 PMID:1591732 PMID:2046748 PMID:4122735 PMID:7565304 More... NCBI chr10:54,798,871...54,810,300 JBrowse link
childhood kidney cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III ISO ClinVar Annotator: match by term: Childhood kidney cell carcinoma ClinVar PMID:25741868 PMID:28492532 NCBI chr 6:123,627,529...123,692,278 JBrowse link
chromophobe renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc5 baculoviral IAP repeat-containing 5 exacerbates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr10:103,567,369...103,580,069 JBrowse link
G Hnf1a HNF1 homeobox A ISO RNA:decreased expression:kidney (human)
ClinVar Annotator: match by term: Chromophobe renal cell carcinoma
ClinVar
RGD
PMID:9392505 PMID:9754819 PMID:10966642 PMID:11393552 PMID:15649945 More... RGD:150540316 NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hnf1b HNF1 homeobox B ISO ClinVar Annotator: match by term: Chromophobe renal cell carcinoma ClinVar PMID:15649945 PMID:16371430 PMID:25536396 PMID:25700310 PMID:25741868 NCBI chr10:68,735,894...68,789,888 JBrowse link
clear cell renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 ISO mRNA:increased expression:kidney: RGD PMID:29218250 RGD:155804290 NCBI chr 9:98,247,300...98,258,877 JBrowse link
G Ager advanced glycosylation end product-specific receptor ISO mRNA:increased expression:renal cortex (human) RGD PMID:21947243 RGD:7244181 NCBI chr20:4,152,758...4,155,956 JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:8755918 PMID:9792409 PMID:10980530 PMID:18560558 PMID:19431188 More... NCBI chr 8:62,724,939...62,829,040 JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 ISO RGD PMID:28672194 RGD:14696810 NCBI chr 7:133,791,341...133,799,713 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:28672194 RGD:14696810 NCBI chr 2:193,424,138...193,435,418 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:28672194 RGD:14696810 NCBI chr11:44,651,171...44,657,483 JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:25741868 PMID:28492532 PMID:35483881 PMID:35992853 NCBI chr16:6,453,126...6,461,952 JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO mRNA, protein:increased expression:kidney RGD PMID:28551630 RGD:15036804 NCBI chr 1:105,076,472...105,081,906 JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 disease_progression ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:13,285,702...13,313,329 JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 exacerbates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr10:103,567,369...103,580,069 JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 ameliorates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr 6:20,722,922...20,916,396 JBrowse link
G C8h11orf65 similar to human chromosome 11 open reading frame 65 ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:8755918 PMID:9792409 PMID:10980530 PMID:18560558 PMID:19431188 More... NCBI chr 8:53,796,033...53,825,277 JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 ISO mRNA:decreased expression:kidney (human) RGD PMID:28486105 RGD:153323299 NCBI chr 4:159,584,623...159,617,867 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO mRNA:decreased expression:kidney: RGD PMID:29218250 RGD:155804290 NCBI chr 4:152,060,781...152,073,628 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO mRNA:increased expression:kidney: RGD PMID:29218250 RGD:155804290 NCBI chr13:42,630,383...42,634,288 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 severity ISO mRNA, protein:decreased expression:kidney (human)
mRNA:increased expression:kidney, lymph nodes (human)
RGD PMID:31018949 PMID:27020590 RGD:151347528, RGD:151347863 NCBI chr20:3,047,269...3,069,277 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27292127 NCBI chr 8:19,440,611...19,486,659 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:27292127 NCBI chr 6:32,507,316...32,621,678 JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 disease_progression ISO RGD PMID:23788753 RGD:13506731 NCBI chr 6:71,650,297...71,675,766 JBrowse link
G Eng endoglin severity ISO protein:increased expression:tumor, vasculature (human)
protein:decreased expression:kidney, tumor (human)
RGD PMID:22204709 PMID:16536758 RGD:7248775, RGD:7248780 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Ep300 E1A binding protein p300 severity ISO mRNA:altered expression:kidney, tumor (human)
mRNA, protein:increased expression:kidney
RGD PMID:23029358 PMID:28551630 RGD:7296925, RGD:15036804 NCBI chr 7:114,987,857...115,058,652 JBrowse link
G F2 coagulation factor II, thrombin ISO protein:increased expression:brain RGD PMID:22065054 RGD:6893520 NCBI chr 3:98,051,958...98,065,246 JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25239121 NCBI chr10:34,414,834...34,455,878 JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase disease_progression
treatment
ISO mRNA:decreased expression:kidney
mRNA:increased expression:kidney
RGD PMID:30648791 PMID:32817424 PMID:32817424 RGD:329812005, RGD:329812006, RGD:329812006 NCBI chr19:31,456,749...31,865,011 JBrowse link
G Gata1 GATA binding protein 1 disease_progression ISO RGD PMID:25230694 RGD:149735195 NCBI chr  X:14,529,706...14,537,530 JBrowse link
G Gata2 GATA binding protein 2 disease_progression ISO RGD PMID:25230694 RGD:149735195 NCBI chr 4:120,654,205...120,667,763 JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO RGD PMID:10383153 RGD:6906878 NCBI chr 1:210,767,237...210,770,242 JBrowse link
G Hnf1a HNF1 homeobox A ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney | ClinVar Annotator: match by term: Clear cell renal carcinoma ClinVar PMID:8866553 PMID:8945470 PMID:9032114 PMID:9045858 PMID:9075818 More... NCBI chr12:47,299,171...47,333,457 JBrowse link
G Igf1r insulin-like growth factor 1 receptor ISO xenograph of human clear cell renal cancer cells in mouse RGD PMID:19509240 RGD:7242921 NCBI chr 1:130,959,787...131,248,664 JBrowse link
G Iscu iron-sulfur cluster assembly enzyme disease_progression ISO mRNA,protein:decreased expression:kidney (human) RGD PMID:23449350 RGD:155260320 NCBI chr12:48,512,852...48,518,696 JBrowse link
G Kat8 lysine acetyltransferase 8 ISO mRNA, protein:decreased expression:kidney (human) RGD PMID:23394073 RGD:9586034 NCBI chr 1:191,954,827...191,967,107 JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 disease_progression
ameliorates
ISO RGD PMID:23982215 PMID:23982215 RGD:151356974, RGD:151356974 NCBI chr17:58,078,175...58,098,455 JBrowse link
G Mir210 microRNA 210 ISO miRNA:increased expression:kidney (human) RGD PMID:23449350 RGD:155260320 NCBI chr 1:196,326,343...196,326,452 JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:11576837 RGD:2290421 NCBI chr 8:4,581,785...4,591,687 JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility
severity
ISO DNA:transition, transversion:cds:g.677C>T, g.1298A>C (human) RGD PMID:21489764 PMID:20039875 RGD:6893474, RGD:6893632 NCBI chr 5:163,748,346...163,768,141 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor severity ISO protein:increased expression:kidney (human) RGD PMID:21881486 RGD:7207420 NCBI chr 7:95,483,105...95,488,031 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:9681819 PMID:10987279 PMID:12172214 PMID:19537786 PMID:21195604 More... NCBI chr 4:148,030,237...148,037,599 JBrowse link
G Pak4 p21 (RAC1) activated kinase 4 disease_progression ISO RGD PMID:25744653 RGD:13504816 NCBI chr 1:92,977,437...93,016,721 JBrowse link
G Pak6 p21 (RAC1) activated kinase 6 disease_progression ISO RGD PMID:24715215 RGD:13506722 NCBI chr 3:126,092,576...126,128,320 JBrowse link
G Pbrm1 polybromo 1 ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:25911086 NCBI chr16:6,219,933...6,319,336 JBrowse link
G Pdgfb platelet derived growth factor subunit B disease_progression ISO RGD PMID:25766258 PMID:23879920 RGD:13504817, RGD:13506650 NCBI chr 7:113,419,882...113,438,343 JBrowse link
G Pml PML nuclear body scaffold ISO protein:decreased expression:kidney (human) RGD PMID:25293974 RGD:41404694 NCBI chr 8:58,627,347...58,661,927 JBrowse link
G Ppbp pro-platelet basic protein disease_progression
ameliorates
ISO RGD PMID:24335961 PMID:24335961 RGD:401794956, RGD:401794956 NCBI chr14:17,586,495...17,587,299 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase severity ISO DNA:SNPs,loss of heterozygosity:multiple (human)
DNA:mutations:multiple (human)
RGD PMID:26864202 PMID:26891804 RGD:150429635, RGD:150429640 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 ISO mRNA,protein:decreased expression:kidney: RGD PMID:29218250 RGD:155804290 NCBI chr20:12,740,105...12,763,054 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr10:73,335,519...73,342,549 JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr10:102,052,158...102,055,365 JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 5:144,060,981...144,090,798 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 6:100,605,165...100,610,192 JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 3:151,589,546...151,594,869 JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 6:20,564,035...20,571,205 JBrowse link
G Tp53 tumor protein p53 ISO mRNA, protein:increased expression:kidney RGD PMID:28551630 RGD:15036804 NCBI chr10:54,798,871...54,810,300 JBrowse link
G Vegfa vascular endothelial growth factor A ISO CTD Direct Evidence: marker/mechanism CTD PMID:25239121 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Xiap X-linked inhibitor of apoptosis ameliorates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr  X:125,756,107...125,803,979 JBrowse link
Denys-Drash syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO protein:decreased expression:sertoli cell RGD PMID:16245160 RGD:1643343 NCBI chr  X:63,104,771...63,273,934 JBrowse link
G Dcdc1-ps1 doublecortin domain containing 1, pseudogene 1 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:92,486,054...92,896,696 JBrowse link
G Dnajc24 DnaJ heat shock protein family (Hsp40) member C24 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:92,450,631...92,486,004 JBrowse link
G Elp4 elongator acetyltransferase complex subunit 4 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:92,162,271...92,385,251 JBrowse link
G Immp1l inner mitochondrial membrane peptidase subunit 1 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:92,385,329...92,449,559 JBrowse link
G Pax6 paired box 6 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:92,128,772...92,157,022 JBrowse link
G Rcn1 reticulocalbin 1 ISO ClinVar Annotator: match by term: Drash syndrome ClinVar PMID:15150775 PMID:17630404 PMID:24138039 PMID:26661695 PMID:27124303 More... NCBI chr 3:91,841,052...91,855,295 JBrowse link
G Wt1 WT1 transcription factor ISO
ISS
ClinVar Annotator: match by term: Drash syndrome | ClinVar Annotator: match by term: Pseudohermaphroditism, nephron disorder and Wilms' tumor
OMIM:194080
CTD Direct Evidence: marker/mechanism
ClinVar
MouseDO
CTD
OMIM
RGD
PMID:1302008 PMID:1327525 PMID:1338906 PMID:1655284 PMID:1658787 More... RGD:1580624 NCBI chr 3:112,019,721...112,068,454 JBrowse link
Global Developmental Delay, Lung Cysts, Overgrowth, and Wilms Tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III ISO ClinVar Annotator: match by term: GLOW SYNDROME | ClinVar Annotator: match by term: GLOW Syndrome OMIM
ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:19556464 PMID:21205968 More... NCBI chr 6:123,627,529...123,692,278 JBrowse link
hereditary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1 deoxyribonuclease 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar PMID:28492532 NCBI chr10:11,498,930...11,505,151 JBrowse link
G Egf epidermal growth factor ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar PMID:25741868 NCBI chr 2:220,893,660...220,976,331 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar NCBI chr13:94,839,484...94,871,295 JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar PMID:25741868 PMID:26467025 PMID:28492532 PMID:28546994 PMID:30680959 More... NCBI chr 1:28,935,965...28,960,936 JBrowse link
G Trap1 TNF receptor-associated protein 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar PMID:28492532 NCBI chr10:11,971,259...12,005,306 JBrowse link
hereditary Wilms' tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Predisposition to Wilms tumor, CTR9-related ClinVar PMID:25741868 PMID:28492532 NCBI chr 1:174,571,952...174,601,974 JBrowse link
kidney angiomyolipoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase treatment ISO associated with Tuberous Sclerosis RGD PMID:23054313 RGD:7245506 NCBI chr 5:164,167,985...164,277,438 JBrowse link
kidney cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf9 fibroblast growth factor 9 ameliorates ISO human gene in mouse model RGD PMID:26183774 RGD:152600905 NCBI chr15:32,208,993...32,254,952 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO associated with Birt-Hogg-Dube Syndrome; mRNA:increased expression:kidney (human) RGD PMID:23150719 RGD:7242016 NCBI chr14:63,073,505...63,729,215 JBrowse link
nephroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A disease_progression ISO RGD PMID:11888090 RGD:2315560 NCBI chr 4:26,312,403...26,488,456 JBrowse link
G Amer1 APC membrane recruitment protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:60,300,595...60,316,480 JBrowse link
G Apoc3 apolipoprotein C3 ISO protein:increased expression:serum RGD PMID:22160518 RGD:7207220 NCBI chr 8:46,531,478...46,533,658 JBrowse link
G Arid1a AT-rich interaction domain 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 5:151,192,014...151,269,291 JBrowse link
G Asxl1 ASXL transcriptional regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 3:162,273,828...162,341,742 JBrowse link
G Bcl2l1 Bcl2-like 1 disease_progression ISO RGD PMID:15717629 RGD:1643482 NCBI chr 3:161,713,777...161,764,844 JBrowse link
G Bcor BCL6 co-repressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:13,282,431...13,402,254 JBrowse link
G Bcorl1 BCL6 co-repressor-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:132,394,703...132,462,414 JBrowse link
G Bmp7 bone morphogenetic protein 7 IEP mRNA:decreased expression:kidney RGD PMID:9808158 RGD:2289034 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Wilms tumor ClinVar PMID:12068308 PMID:12198537 PMID:12447372 PMID:12619120 PMID:12644542 More... NCBI chr 4:69,329,772...69,476,931 JBrowse link
G Brca2 BRCA2, DNA repair associated susceptibility ISO DNA:deletion, point mutations: :886delGT, 4876G>T, IVS7+2T>G
ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
OMIM
CTD
RGD
PMID:186727 PMID:251866 PMID:278235 PMID:1772447 PMID:2200631 More... RGD:2289049 NCBI chr12:4,895,092...4,939,340 JBrowse link
G Ccdc160 coiled-coil domain containing 160 ISO ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:10402475 PMID:12713262 PMID:17603795 PMID:21362501 PMID:28492532 NCBI chr  X:132,468,141...132,478,616 JBrowse link
G Ccnd2 cyclin D2 ISO RGD PMID:15797629 RGD:2289153 NCBI chr 4:161,653,048...161,675,422 JBrowse link
G Cd44 CD44 molecule ISO RGD PMID:12131349 RGD:2289361 NCBI chr 3:109,610,824...109,699,776 JBrowse link
G Cdk15 cyclin-dependent kinase 15 ISO mRNA:increased expression:kidney RGD PMID:12057921 RGD:2316755 NCBI chr 9:68,205,759...68,299,218 JBrowse link
G Cdk4 cyclin-dependent kinase 4 disease_progression ISO RGD PMID:15797629 RGD:2289153 NCBI chr 7:64,771,453...64,774,891 JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B disease_progression ISO RGD PMID:14760081 RGD:2293605 NCBI chr 4:169,491,273...169,496,500 JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO protein:increased expression:kidney RGD PMID:17369505 RGD:2289679 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISO protein:increased expression:kidney RGD PMID:17369505 RGD:2289679
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:10617473 PMID:11719428 PMID:11967536 PMID:15492928 PMID:18759107 More... NCBI chr12:51,448,838...51,481,159 JBrowse link
G Col6a3 collagen type VI alpha 3 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:98,809,171...98,887,060 JBrowse link
G Ctnnb1 catenin beta 1 ISO protein:increased expression:kidney
ClinVar Annotator: match by term: Nephroblastoma
CTD Direct Evidence: marker/mechanism
DNA:mutations: :multiple
ClinVar
CTD
RGD
PMID:9065402 PMID:10435629 PMID:21237236 PMID:26822237 PMID:28825729 More... RGD:2289833, RGD:2289834 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:17634442 RGD:7257700 NCBI chr 9:75,729,493...75,735,868 JBrowse link
G Dgcr8 DGCR8 microprocessor complex subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr11:96,208,959...96,241,560 JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 ISO DNA:missense mutations, deletions:multiple (human) RGD PMID:22306653 RGD:11558020 NCBI chr 9:94,802,056...95,184,523 JBrowse link
G Drosha drosha ribonuclease III ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 2:61,864,886...61,976,688 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO protein:increased expression:kidney RGD PMID:16932912 RGD:2289932 NCBI chr10:83,907,491...83,931,365 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 severity ISO RGD PMID:12560388 RGD:2289966 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Fzd6 frizzled class receptor 6 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:26822237 NCBI chr 7:70,055,012...70,086,781 JBrowse link
G Fzd7 frizzled class receptor 7 ISO mRNA:increased expression:kidney RGD PMID:12057921 RGD:2316755 NCBI chr 9:60,931,433...60,934,252 JBrowse link
G Glipr1 GLI pathogenesis-related 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18030365 NCBI chr 7:49,373,579...49,399,190 JBrowse link
G Gpc3 glypican 3 ISO ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor | ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
OMIM
ClinVar
CTD
PMID:8589713 PMID:8958336 PMID:9192268 PMID:9536098 PMID:10402475 More... NCBI chr  X:136,789,770...137,157,598 JBrowse link
G Gpc4 glypican 4 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr  X:131,644,711...131,755,349 JBrowse link
G H19 H19 imprinted maternally expressed transcript susceptibility ISO associated with Beckwith-Wiedemann Syndrome;DNA:hypermethylation
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:11436121 RGD:2306181 NCBI chr 1:207,160,175...207,162,851 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha severity ISO protein:increased expression:kidney RGD PMID:17937859 RGD:2291911 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:10402475 PMID:12713262 PMID:17603795 PMID:21362501 PMID:28492532 NCBI chr  X:132,736,175...132,768,149 JBrowse link
G Igf1r insulin-like growth factor 1 receptor treatment ISO human cells in a mouse model
mRNA:increased expression:kidney (human)
RGD PMID:22529373 PMID:8390684 PMID:8390684 RGD:7242789, RGD:12904709, RGD:12904709 NCBI chr 1:130,959,787...131,248,664 JBrowse link
G Igf2 insulin-like growth factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:8252039 NCBI chr 1:197,814,409...197,831,802 JBrowse link
G Igf2r insulin-like growth factor 2 receptor ISO RGD PMID:9070652 RGD:7242956 NCBI chr 1:50,526,878...50,615,265 JBrowse link
G Jup junction plakoglobin disease_progression ISO RGD PMID:17633921 RGD:2301745 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Kdm4d lysine demethylase 4D ISO mRNA:increased expression:kidney (human) RGD PMID:24219278 RGD:9588525 NCBI chr 8:11,279,756...11,304,920 JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase disease_progression ISO RGD PMID:19010635 RGD:12910726 NCBI chr14:32,901,615...32,978,895 JBrowse link
G Lin28a lin-28 homolog A ISS OMIM:194070 MouseDO NCBI chr 5:146,227,119...146,244,122 JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 1:50,977,870...51,067,117 JBrowse link
G Max MYC associated factor X ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:101,369,989...101,395,333 JBrowse link
G Med12 mediator complex subunit 12 ISO ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor, somatic ClinVar PMID:25741868 PMID:26822237 NCBI chr  X:66,404,807...66,427,775 JBrowse link
G Mir106a microRNA 106a ISO ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:10402475 PMID:12713262 PMID:17603795 PMID:21362501 PMID:28492532 NCBI chr  X:132,422,584...132,422,661 JBrowse link
G Mir19b2 microRNA 19b-2 ISO ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:10402475 PMID:12713262 PMID:17603795 PMID:21362501 PMID:28492532 NCBI chr  X:132,422,072...132,422,167 JBrowse link
G Mllt1 MLLT1, super elongation complex subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:1,731,077...1,775,985 JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:transition:cds:g.677C>T (human) RGD PMID:19346876 RGD:6893546 NCBI chr 5:163,748,346...163,768,141 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor severity ISO protein:increased expression:kidney (mouse)
mRNA:decreased expression:tumor (human)
RGD PMID:21983638 PMID:18260125 RGD:7207786, RGD:7207840 NCBI chr 7:95,483,105...95,488,031 JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:41,446,683...41,452,584 JBrowse link
G Nono non-POU domain containing, octamer-binding ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:66,554,131...66,571,992 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO mRNA:increased expression:kidney RGD PMID:12165855 RGD:2299168 NCBI chr 1:161,522,399...161,637,623 JBrowse link
G Pax2 paired box 2 ISO
IEP
mRNA:increased expression:kidney RGD PMID:12057921 PMID:7937920 RGD:2316755, RGD:2316757 NCBI chr 1:243,616,509...243,697,454 JBrowse link
G Pcna proliferating cell nuclear antigen disease_progression ISO RGD PMID:11869017 RGD:2315007 NCBI chr 3:139,951,948...139,955,820 JBrowse link
G Phf6 PHD finger protein 6 ISO ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:10402475 PMID:12713262 PMID:17603795 PMID:21362501 PMID:28492532 NCBI chr  X:137,576,214...137,619,297 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO protein:increased expression:kidney RGD PMID:16945639 RGD:2300206 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Rest RE1-silencing transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:26551668 NCBI chr14:30,859,109...30,879,828 JBrowse link
G Serpinf1 serpin family F member 1 ISO protein:decreased expression:kidney RGD PMID:16863836 RGD:2312354 NCBI chr10:60,250,198...60,262,593 JBrowse link
G Six1 SIX homeobox 1 severity ISO DNA:missense mutation:cds:p.Q177R (human)
CTD Direct Evidence: marker/mechanism
protein:increased expression:kidney, blastema (human)
CTD
RGD
PMID:28825729 PMID:25670083 PMID:22180226 RGD:11561953, RGD:11561963 NCBI chr 6:97,482,617...97,487,853 JBrowse link
G Six2 SIX homeobox 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:8,974,859...8,981,345 JBrowse link
G Slc2a1 solute carrier family 2 member 1 severity ISO RGD PMID:22483234 RGD:12879482 NCBI chr 5:138,002,522...138,030,742 JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:25741868 PMID:28492532 NCBI chr18:69,518,988...69,549,684 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO protein:increased serine phosphorylation:kidney RGD PMID:16799645 RGD:2291893 NCBI chr 9:56,911,522...56,951,926 JBrowse link
G Stat3 signal transducer and activator of transcription 3 disease_progression ISO protein:increased expression:kidney RGD PMID:17937859 RGD:2291911 NCBI chr10:86,311,528...86,363,513 JBrowse link
G Terc telomerase RNA component disease_progression ISO RGD PMID:16172460 RGD:2291966 NCBI chr 2:112,815,654...112,816,041 JBrowse link
G Tert telomerase reverse transcriptase disease_progression ISO RGD PMID:16172460 RGD:2291966 NCBI chr 1:29,637,213...29,659,561 JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:26822237 NCBI chr 2:221,988,645...222,072,813 JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:11466614 RGD:2290439 NCBI chr 4:148,306,021...148,312,558 JBrowse link
G Top2a DNA topoisomerase II alpha ISO mRNA:increased expression:kidney RGD PMID:12438255 PMID:16556665 RGD:2315132, RGD:2315131 NCBI chr10:84,441,954...84,473,093 JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr10:54,798,871...54,810,300 JBrowse link
G Tp73 tumor protein p73 ISO DNA:loss of heterozygosity:kidney RGD PMID:10760569 RGD:2291834 NCBI chr 5:169,903,801...169,988,075 JBrowse link
G Trim28 tripartite motif-containing 28 ISO ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor 1 ClinVar PMID:25741868 PMID:28492532 PMID:32699065 NCBI chr 1:82,724,842...82,731,566 JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28553959 NCBI chr 1:29,357,093...29,402,078 JBrowse link
G Vegfc vascular endothelial growth factor C disease_progression ISO RGD PMID:17257131 RGD:2315481 NCBI chr16:44,445,293...44,560,887 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IEP
ISO
protein:decreased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:11880179 PMID:11880179 RGD:625549 NCBI chr 4:146,772,483...146,779,376 JBrowse link
G Wif1 Wnt inhibitory factor 1 ISO mRNA:increased expression:kidney RGD PMID:16575872 RGD:2291870 NCBI chr 7:58,433,326...58,503,853 JBrowse link
G Wt1 WT1 transcription factor ISO DNA:point mutations:exon:1084C>T; 1297_1298insC, 1298_1299delCG,(human)
ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
ClinVar Annotator: match by term: Nephroblastoma | ClinVar Annotator: match by term: Wilms tumor | ClinVar Annotator: match by term: Wilms tumor 1 | ClinVar Annotator: match by term: Wilms tumor, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
RGD
PMID:1302008 PMID:1327525 PMID:1338906 PMID:1654525 PMID:1655284 More... RGD:2315545, RGD:1331525, RGD:2315544 NCBI chr 3:112,019,721...112,068,454 JBrowse link
G Xpo5 exportin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:22,237,760...22,275,745 JBrowse link
nephroma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III ISO DNA:mutations: : RGD PMID:24481001 RGD:149735348 NCBI chr 6:123,627,529...123,692,278 JBrowse link
nonpapillary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin-dependent protein kinase I ISO ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma ClinVar NCBI chr 4:148,036,843...148,047,675 JBrowse link
G Flcn folliculin ISS
ISO
OMIM:144700
ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma
MouseDO
ClinVar
PMID:12204536 PMID:12471204 PMID:15852235 PMID:16199547 PMID:17496196 More... NCBI chr10:45,088,164...45,107,581 JBrowse link
G Hnf1a HNF1 homeobox A ISO ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma ClinVar PMID:8945470 PMID:9075818 PMID:9112026 PMID:9133564 PMID:9287053 More... NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hnf1b HNF1 homeobox B ISO ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma ClinVar PMID:9398836 PMID:12148114 PMID:15068978 PMID:15930087 PMID:16249435 More... NCBI chr10:68,735,894...68,789,888 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma ClinVar NCBI chr 4:148,030,237...148,037,599 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Nonpapillary renal cell carcinoma ClinVar PMID:8956040 PMID:9058738 PMID:9399847 PMID:9536098 PMID:9671762 More... NCBI chr 4:146,772,483...146,779,376 JBrowse link
papillary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr 8:13,285,702...13,313,329 JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr10:103,567,369...103,580,069 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic | ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 More... NCBI chr 4:69,329,772...69,476,931 JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic | ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 1:205,712,625...205,729,406 JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 1:196,299,843...196,315,170 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic | ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar
OMIM
PMID:1104268 PMID:9140397 PMID:9326629 PMID:9536098 PMID:9563489 More... NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mir210 microRNA 210 ISO miRNA:increased expression:kidney (human) RGD PMID:23449350 RGD:155260320 NCBI chr 1:196,326,343...196,326,452 JBrowse link
G Prcc proline rich mitotic checkpoint control factor ISO OMIM NCBI chr 2:173,326,261...173,351,799 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic | ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:7660122 PMID:7728151 PMID:7784063 PMID:7987306 PMID:7987327 More... NCBI chr 4:146,772,483...146,779,376 JBrowse link
G Xiap X-linked inhibitor of apoptosis exacerbates ISO mRNA:increased expression:kidney (human) RGD PMID:31964418 RGD:153344516 NCBI chr  X:125,756,107...125,803,979 JBrowse link
Perlman syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpg alkaline phosphatase, germ cell ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,187,995...95,205,127 JBrowse link
G Alpi alkaline phosphatase, intestinal ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,221,314...95,224,780 JBrowse link
G Alpp alkaline phosphatase, placental ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,213,763...95,216,509 JBrowse link
G Armc9 armadillo repeat containing 9 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,250,492...94,376,589 JBrowse link
G Atg16l1 autophagy related 16-like 1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,869,839...95,905,354 JBrowse link
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,404,197...94,408,148 JBrowse link
G C9h2orf72 similar to human chromosome 2 open reading frame 72 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,139,808...94,147,919 JBrowse link
G Cab39 calcium binding protein 39 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:93,911,099...93,972,542 JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,310,316...95,318,734 JBrowse link
G Chrng cholinergic receptor nicotinic gamma subunit ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,325,984...95,332,092 JBrowse link
G Cops7b COP9 signalosome subunit 7B ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,686,314...94,711,903 JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Predisposition to Wilms tumor ClinVar PMID:9536098 PMID:17576681 PMID:25099282 PMID:28492532 NCBI chr 1:174,571,952...174,601,974 JBrowse link
G Dgkd diacylglycerol kinase, delta ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,964,507...96,055,160 JBrowse link
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:25741868 NCBI chr15:82,231,922...82,258,299 JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 ISO
ISS
ClinVar Annotator: match by term: DIS3L2-related condition | ClinVar Annotator: match by term: Perlman syndrome | ClinVar Annotator: match by term: Predisposition to Wilms tumor
OMIM:267000
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
MouseDO
CTD
PMID:6093533 PMID:9536098 PMID:10508986 PMID:16199547 PMID:16957732 More... NCBI chr 9:94,802,056...95,184,523 JBrowse link
G Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,243,345...96,244,358 JBrowse link
G Ecel1 endothelin converting enzyme-like 1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,267,417...95,276,508 JBrowse link
G Efhd1 EF-hand domain family, member D1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,386,155...95,432,800 JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,333,439...95,362,366 JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,449,143...95,574,927 JBrowse link
G Gpr55 G protein-coupled receptor 55 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,037,748...94,081,426 JBrowse link
G Hjurp Holliday junction recognition protein ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,301,183...96,315,587 JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,184,442...94,206,851 JBrowse link
G Itm2c integral membrane protein 2C ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:93,993,922...94,007,737 JBrowse link
G Kcnj13 potassium inwardly-rectifying channel, subfamily J, member 13 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,509,228...95,528,400 JBrowse link
G Mroh2a maestro heat-like repeat family member 2A ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,262,307...96,309,036 JBrowse link
G Ncl nucleolin ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,447,559...94,456,083 JBrowse link
G Neu2 neuraminidase 2 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,666,338...95,715,209 JBrowse link
G Ngef neuronal guanine nucleotide exchange factor ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,594,823...95,692,381 JBrowse link
G Nmur1 neuromedin U receptor 1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,480,002...94,486,147 JBrowse link
G Nppc natriuretic peptide C ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,767,986...94,772,186 JBrowse link
G Pde6d phosphodiesterase 6D ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,640,932...94,685,918 JBrowse link
G Prss56 serine protease 56 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,289,984...95,307,877 JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,157,971...94,233,218 JBrowse link
G Ptma prothymosin alpha ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,624,194...94,628,276 JBrowse link
G Sag S-antigen visual arrestin ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,915,640...95,956,641 JBrowse link
G Snorc secondary ossification center associated regulator of chondrocyte maturation ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:95,574,943...95,593,394 JBrowse link
G Snord20 small nucleolar RNA, C/D box 20 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,449,039...94,449,118 JBrowse link
G Snord82 small nucleolar RNA, C/D box 82 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,452,486...94,452,557 JBrowse link
G Sp100 SP100 nuclear antigen ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:93,758,975...93,825,068 JBrowse link
G Sp110 SP110 nuclear body protein ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:93,648,574...93,673,476 JBrowse link
G Sp140 SP140 nuclear body protein ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:93,672,536...93,722,596 JBrowse link
G Spata3 spermatogenesis associated 3 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,107,832...94,120,280 JBrowse link
G Spp2 secreted phosphoprotein 2 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,454,636...96,474,453 JBrowse link
G Tex44 testis expressed 44 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:94,523,649...94,525,067 JBrowse link
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,315,567...96,437,959 JBrowse link
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,249,143...96,256,264 JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,239,019...96,256,264 JBrowse link
G Ugt1a3 UDP glycosyltransferase 1 family, polypeptide A3 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,228,134...96,256,264 JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,210,053...96,256,264 JBrowse link
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,195,018...96,256,264 JBrowse link
G Ugt1a9 UDP glucuronosyltransferase family 1 member A9 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,144,786...96,256,264 JBrowse link
G Usp40 ubiquitin specific peptidase 40 ISO ClinVar Annotator: match by term: Perlman syndrome ClinVar PMID:28492532 NCBI chr 9:96,055,741...96,126,766 JBrowse link
renal adenoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7b ATPase copper transporting beta IAGP RGD PMID:11509115 RGD:1302456 NCBI chr16:76,654,725...76,726,092 JBrowse link
G Atp7bhts ATPase copper transporting beta; hepatitis IAGP RGD PMID:11509115 RGD:1302456
renal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl1 FOS like 1, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 1:212,183,885...212,192,391 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 6:30,017,952...30,039,269 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 5:115,009,900...115,012,993 JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr19:23,176,265...23,178,049 JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr16:18,734,121...18,735,799 JBrowse link
G Letmd1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:kidney RGD PMID:12879013 RGD:2314918 NCBI chr 7:131,584,241...131,597,797 JBrowse link
G Mcph1 microcephalin 1 ISO protein:decreased expression:kidney (human) RGD PMID:25197360 RGD:9589037 NCBI chr16:71,021,855...71,224,067 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Kidney Carcinoma ClinVar PMID:17360675 PMID:24631838 PMID:26018084 PMID:27159400 PMID:27482884 More... NCBI chr 5:164,167,985...164,277,438 JBrowse link
renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A disease_progression ISO DNA:polymorphism: :3435C>T (human) RGD PMID:17177989 PMID:12089380 RGD:2315557, RGD:2315559 NCBI chr 4:26,312,403...26,488,456 JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 susceptibility ISO DNA:polymorphism: :p.Q141K (human) RGD PMID:15906349 RGD:2315569 NCBI chr 4:89,006,056...89,132,915 JBrowse link
G Ache acetylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18482720 NCBI chr12:25,042,882...25,050,608 JBrowse link
G Acy1 aminoacylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 8:107,072,354...107,077,756 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 severity ISO RGD PMID:21511296 RGD:13831349 NCBI chr 7:108,293,681...108,365,892 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:29723618 NCBI chr11:91,226,524...91,240,244 JBrowse link
G Afp alpha-fetoprotein ISO RGD PMID:1714107 RGD:2292042 NCBI chr14:17,573,412...17,591,476 JBrowse link
G Agtr1a angiotensin II receptor, type 1a severity ISO protein:increased expression:kidney RGD PMID:21102591 RGD:6903280 NCBI chr17:34,383,397...34,435,523 JBrowse link
G Agtr2 angiotensin II receptor, type 2 disease_progression ISO protein:increased expression:kidney RGD PMID:21102591 RGD:6903280 NCBI chr  X:116,914,320...116,918,504 JBrowse link
G Ahnak AHNAK nucleoprotein ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:205,882,225...205,970,934 JBrowse link
G Akap13 A-kinase anchoring protein 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:129,313,183...129,619,647 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO protein:increased serine phosphorylation:kidney RGD PMID:17681738 RGD:1643331 NCBI chr 6:137,534,810...137,555,131 JBrowse link
G Akt3 AKT serine/threonine kinase 3 susceptibility ISO DNA:missense mutation:exon, intron:multiple RGD PMID:23378641 RGD:13503319 NCBI chr13:91,475,839...91,758,060 JBrowse link
G Alad aminolevulinate dehydratase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21799727 NCBI chr 5:75,961,993...75,972,334 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:218,000,470...218,152,962 JBrowse link
G Alk ALK receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:22743654 NCBI chr 6:28,631,431...29,351,321 JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type ISO protein:increased expression:kidney RGD PMID:14654968 RGD:2315610 NCBI chr10:54,958,263...54,970,542 JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type ISO CTD Direct Evidence: marker/mechanism CTD PMID:30258081 NCBI chr10:53,863,060...53,874,938 JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:30258081 NCBI chr 4:151,203,948...151,251,126 JBrowse link
G Amacr alpha-methylacyl-CoA racemase ISO RGD PMID:14707866 RGD:2315633 NCBI chr 2:61,673,291...61,685,381 JBrowse link
G Ang angiogenin ISO protein:increased expression:serum RGD PMID:18808740 RGD:2325699 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Angpt1 angiopoietin 1 severity ISO mRNA:altered expression:kidney RGD PMID:17505508 RGD:1643335 NCBI chr 7:75,415,959...75,668,696 JBrowse link
G Anxa1 annexin A1 IEP RGD PMID:14587099 RGD:7421570 NCBI chr 1:227,287,713...227,306,739 JBrowse link
G Anxa2 annexin A2 IEP RGD PMID:14587099 RGD:7421570 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Anxa4 annexin A4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:120,741,750...120,798,534 JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr15:22,355,478...22,385,222 JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17133271 NCBI chr 7:27,381,392...27,466,772 JBrowse link
G Apc APC regulator of WNT signaling pathway onset
disease_progression
severity
ISO DNA,protein:LOH,decreased expression: :
DNA:LOH: :
RGD PMID:16116480 PMID:10426194 PMID:15203750 RGD:7242056, RGD:7242060, RGD:7242059 NCBI chr18:26,138,382...26,196,021 JBrowse link
G Aprt adenine phosphoribosyl transferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr19:50,626,201...50,628,491 JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator treatment ISO DNA:missense mutation: :pF446L (human) RGD PMID:27595394 RGD:13503335 NCBI chr 2:182,997,731...183,056,584 JBrowse link
G Asb15 ankyrin repeat and SOCS box containing 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 4:53,021,553...53,050,846 JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic ClinVar PMID:28492532 NCBI chr 4:46,400,485...46,456,085 JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Renal adenocarcinoma ClinVar PMID:10571946 NCBI chr 8:62,724,939...62,829,040 JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 ISO DNA:hypermethylation:promoter RGD PMID:21132003 RGD:14696812 NCBI chr 7:133,791,341...133,799,713 JBrowse link
G Aurka aurora kinase A ISO mRNA, protein:increased expression:kidney RGD PMID:17349527 RGD:1643346 NCBI chr 3:181,546,742...181,562,890 JBrowse link
G Bad BCL2-associated agonist of cell death ISO RGD PMID:15851405 RGD:2292677 NCBI chr 1:213,562,719...213,572,034 JBrowse link
G Bak1 BCL2-antagonist/killer 1 severity ISO RGD PMID:9894249 RGD:2315703 NCBI chr20:5,102,334...5,111,615 JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 PMID:22683710 PMID:23797736 PMID:25231345 NCBI chr16:6,453,126...6,461,952 JBrowse link
G Bche butyrylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18482720 NCBI chr 2:160,607,289...160,699,760 JBrowse link
G Bcl2 BCL2, apoptosis regulator disease_progression ISO RGD PMID:17482919 PMID:18283311 RGD:2293019, RGD:2298896 NCBI chr13:23,204,464...23,366,900 JBrowse link
G Bcl2l1 Bcl2-like 1 ISO RGD PMID:12025227 RGD:1643483 NCBI chr 3:161,713,777...161,764,844 JBrowse link
G Bik BCL2-interacting killer ISO protein:decreased expression:kidney RGD PMID:16322756 RGD:14394818 NCBI chr 7:114,672,277...114,691,296 JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 disease_progression ISO mRNA:altered expression:kidney RGD PMID:17154176 RGD:1643526 NCBI chr 8:13,253,697...13,273,672 JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 ISO mRNA:altered expression:kidney RGD PMID:17154176 RGD:1643526 NCBI chr 8:13,285,702...13,313,329 JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO mRNA:splice variant
CTD Direct Evidence: therapeutic
protein:increased expression:kidney
CTD
RGD
PMID:16188142 PMID:12115583 PMID:17363528 RGD:2293108, RGD:2293102 NCBI chr10:103,567,369...103,580,069 JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17437058 PMID:25401301 NCBI chr 3:188,425,392...188,430,174 JBrowse link
G Bmp4 bone morphogenetic protein 4 severity ISO RGD PMID:17644140 RGD:1643589 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO mRNA,protein:increased expression:kidney RGD PMID:20016212 RGD:7242419 NCBI chr17:26,523,704...26,785,558 JBrowse link
G Bmp7 bone morphogenetic protein 7 disease_progression ISO RGD PMID:17644140 RGD:1643589 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Bsg basigin disease_progression ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:36574092 PMID:17021824 RGD:2289052 NCBI chr 7:10,643,788...10,651,005 JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO mRNA:decreased expression:kidney RGD PMID:14996721 RGD:2289069 NCBI chr13:48,083,931...48,087,690 JBrowse link
G Btg3 BTG anti-proliferation factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19221000 NCBI chr11:17,030,156...17,046,069 JBrowse link
G C4a complement C4A disease_progression ISO RGD PMID:19150565 RGD:5688259 NCBI chr20:4,010,306...4,024,707 JBrowse link
G C4b complement C4B disease_progression ISO RGD PMID:19150565 RGD:5688259 NCBI chr20:4,197,371...4,211,684 JBrowse link
G C8h11orf65 similar to human chromosome 11 open reading frame 65 ISO ClinVar Annotator: match by term: Renal adenocarcinoma ClinVar PMID:10571946 NCBI chr 8:53,796,033...53,825,277 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:7053379 RGD:10755426 NCBI chr 6:25,292,133...25,315,078 JBrowse link
G Capg capping actin protein, gelsolin like ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:106,152,912...106,170,010 JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic ClinVar PMID:28492532 NCBI chr 4:45,978,142...46,014,032 JBrowse link
G Car9 carbonic anhydrase 9 disease_progression ISO DNA, mRNA:hypomethylation, increased expression:promoter, kidney
protein:increased expression:serum, urine
RGD PMID:11506497 PMID:12966427 PMID:18464292 PMID:12883698 RGD:2293201, RGD:2293198, RGD:2293191, RGD:2293199 NCBI chr 5:57,763,234...57,769,838 JBrowse link
G Card11 caspase recruitment domain family, member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr12:18,735,088...18,872,045 JBrowse link
G Casp2 caspase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 4:72,116,265...72,134,023 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:17513560 RGD:2293308 NCBI chr16:52,395,539...52,413,794 JBrowse link
G Cav1 caveolin 1 disease_progression ISO protein:increased expression:kidney
ClinVar Annotator: match by term: Renal cell carcinoma
ClinVar
RGD
PMID:28492532 PMID:15247769 RGD:2289107 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Ccnb1 cyclin B1 disease_progression ISO protein:increased expression:kidney RGD PMID:16557593 RGD:2315941 NCBI chr 2:33,646,252...33,655,225 JBrowse link
G Ccnd1 cyclin D1 ISO DNA:polymorphism RGD PMID:15538282 PMID:17924468 RGD:2289130, RGD:2289127 NCBI chr 1:209,518,288...209,527,986 JBrowse link
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:18679818 RGD:2316007 NCBI chr 9:20,891,696...20,987,199 JBrowse link
G Ccne1 cyclin E1 ISO mRNA, protein:increased expression:kidney RGD PMID:17726548 RGD:2289228 NCBI chr 1:99,918,672...99,927,986 JBrowse link
G Cd40 CD40 molecule treatment ISO RGD PMID:15282531 PMID:12594303 PMID:20426873 RGD:7248440, RGD:11522744, RGD:7248724 NCBI chr 3:174,209,113...174,224,592 JBrowse link
G Cd44 CD44 molecule disease_progression
severity
ISO protein:increased expression:kidney RGD PMID:12833185 PMID:17284111 RGD:2289360, RGD:2289351 NCBI chr 3:109,610,824...109,699,776 JBrowse link
G Cd46 CD46 molecule ISO RGD PMID:10744069 RGD:2293550 NCBI chr13:109,104,122...109,134,903 JBrowse link
G Cdc14b cell division cycle 14B severity ISO mRNA:decreased expression:kidney: RGD PMID:24619757 RGD:10059341 NCBI chr17:850,272...938,972 JBrowse link
G Cdh1 cadherin 1 disease_progression
onset
ISO protein:decreased expression, altered localization:kidney, nucleus
DNA:LOH: :
RGD PMID:17906660 PMID:15203750 RGD:2289489, RGD:7242059 NCBI chr19:51,402,178...51,471,572 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:16740772 RGD:2293561 NCBI chr 7:1,714,392...1,721,964 JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO protein:increased expression:kidney RGD PMID:15991006 RGD:2293579 NCBI chr 7:64,771,453...64,774,891 JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B disease_progression ISO protein:decreased expression:kidney
mRNA, protein:increased expression:kidney
RGD PMID:17924468 PMID:18425369 PMID:18495610 RGD:2289127, RGD:2293590, RGD:2293589 NCBI chr 4:169,491,273...169,496,500 JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IAGP
ISO
DNA:gene instability
DNA:deletion
DNA, protein:hypermethylation, increased expression:promoter, kidney
RGD PMID:11839561 PMID:17201148 PMID:15232742 RGD:1298747, RGD:2289680, RGD:2289699 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISO DNA:deletion
DNA:hypermethylation:promoter
RGD PMID:17201148 PMID:15232742 RGD:2289680, RGD:2289699
G Cdkn2a_v2 cyclin-dependent kinase inhibitor 2A, variant 2 ISO DNA, protein:hypermethylation, increased expression:promoter, kidney
DNA:deletion
RGD PMID:15232742 PMID:17201148 RGD:2289699, RGD:2289680
G Cdkn2b cyclin-dependent kinase inhibitor 2B IAGP DNA:loss of heterozygosity, deletion RGD PMID:10391689 RGD:7248758 NCBI chr 5:109,123,308...109,134,906 JBrowse link
G Cftr CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic ClinVar PMID:28492532 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Cnn2 calponin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:9,712,505...9,719,678 JBrowse link
G Comt catechol-O-methyltransferase susceptibility ISO DNA:polymorphism:exon RGD PMID:17220335 RGD:2289716 NCBI chr11:96,072,371...96,091,956 JBrowse link
G Cpq carboxypeptidase Q ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr 7:64,264,025...64,830,867 JBrowse link
G Crabp1 cellular retinoic acid binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16254461 NCBI chr 8:55,138,363...55,159,360 JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 7:31,827,131...31,839,796 JBrowse link
G Crp C-reactive protein disease_progression ISO RGD PMID:22958305 RGD:6904212 NCBI chr13:87,694,062...87,695,978 JBrowse link
G Cryab crystallin, alpha B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 8:59,989,885...59,995,532 JBrowse link
G Csf1r colony stimulating factor 1 receptor treatment ISO mRNA:increased expression:kidney
mouse cell line in a mouse model
RGD PMID:18592004 PMID:32302573 PMID:22052465 RGD:2299092, RGD:150524293, RGD:7257566 NCBI chr18:56,834,152...56,860,804 JBrowse link
G Csmd3 CUB and Sushi multiple domains 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 PMID:23797736 NCBI chr 7:78,747,322...80,066,466 JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 ISO DNA:SNPs:exons:rs3087243, rs231775 (human) RGD PMID:17678726 RGD:7204723 NCBI chr 9:69,812,859...69,819,959 JBrowse link
G Ctnna1 catenin alpha 1 disease_progression ISO protein:decreased expression:kidney RGD PMID:9355975 RGD:2289799 NCBI chr18:26,728,246...26,860,911 JBrowse link
G Ctnnb1 catenin beta 1 disease_progression ISO protein:increased expression:kidney
ClinVar Annotator: match by term: Renal adenocarcinoma
ClinVar
RGD
PMID:26822237 PMID:11831984 PMID:15330191 RGD:2289835, RGD:2289794 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Ctsb cathepsin B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr15:41,565,607...41,586,479 JBrowse link
G Ctsd cathepsin D ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:206,956,945...206,968,821 JBrowse link
G Cul7 cullin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 9:14,319,102...14,333,035 JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:16210641 RGD:7257682 NCBI chr 9:75,729,493...75,735,868 JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 no_association ISO
IEP
DNA:polymorphism: :p.I462V (human)
DNA:SNPs: :6235T>C, 4889A>G, 4887C>A (human)
RGD PMID:22296350 PMID:11115552 PMID:9631944 PMID:22000673 RGD:7257729, RGD:7296938, RGD:7296939, RGD:7296937 NCBI chr 8:66,991,940...66,998,014 JBrowse link
G Dapk1 death associated protein kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17133271 NCBI chr17:3,935,826...4,096,858 JBrowse link
G Dll4 delta like canonical Notch ligand 4 treatment ISO RGD PMID:25618828 RGD:155663382 NCBI chr 3:126,770,945...126,780,769 JBrowse link
G Dnhd1 dynein heavy chain domain 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 1:169,402,615...169,486,684 JBrowse link
G Ebag9 estrogen receptor binding site associated antigen 9 disease_progression ISO RGD PMID:15867365 RGD:2289852 NCBI chr 7:75,810,950...75,828,902 JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:9,183,836...9,196,255 JBrowse link
G Egfr epidermal growth factor receptor ISO protein:increased expression:tumor RGD PMID:18467719 RGD:2293730 NCBI chr14:95,378,626...95,551,358 JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 ISO protein:increased expression:kidney RGD PMID:20978146 RGD:13504705 NCBI chr19:52,867,900...52,907,308 JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 ISO protein:increased expression:kidney RGD PMID:20978146 RGD:13504705 NCBI chr 1:82,451,554...82,459,809 JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 ISO protein:increased expression:serum RGD PMID:20676679 RGD:13506732 NCBI chr 6:71,650,297...71,675,766 JBrowse link
G Eloc elongin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 5:2,661,527...2,677,893 JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP
ISO
CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:21131975 PMID:12750296 RGD:10395373 NCBI chr 6:13,543,252...13,626,147 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism
mRNA:decreased expression:kidney
CTD
RGD
PMID:10897039 PMID:17296437 PMID:15360049 RGD:2289930, RGD:2289987 NCBI chr10:83,907,491...83,931,365 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO mRNA, protein:decreased expression:kidney RGD PMID:15360049 RGD:2289987 NCBI chr 9:76,973,386...78,045,633 JBrowse link
G Fas Fas cell surface death receptor ISO DNA:missense mutations:exon
protein:increased expression:serum
RGD PMID:11435457 PMID:12460460 PMID:10654915 PMID:17031406 RGD:2290132, RGD:2290131, RGD:2290133, RGD:2290099 NCBI chr 1:241,212,155...241,245,774 JBrowse link
G Faslg Fas ligand ISO RGD PMID:17641033 PMID:11435457 RGD:2290051, RGD:2290132 NCBI chr13:76,680,885...76,706,042 JBrowse link
G Fgf2 fibroblast growth factor 2 disease_progression ISO protein:increased expression:serum RGD PMID:1718278 RGD:2290303 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 disease_progression ISO RGD PMID:25900027 RGD:11352663 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fh fumarate hydratase ISO RGD PMID:17211469 RGD:6907135 NCBI chr13:90,056,565...90,082,450 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO RGD PMID:10530564 PMID:17539022 RGD:2289903, RGD:2289870 NCBI chr15:16,365,401...17,872,901 JBrowse link
G Flcn folliculin treatment IAGP
IMP
ISO
CTD Direct Evidence: marker/mechanism CTD
OMIM
RGD
PMID:12204536 PMID:14769940 PMID:16369488 RGD:1302869, RGD:13605606 NCBI chr10:45,088,164...45,107,581 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISO CTD Direct Evidence: therapeutic
protein:increased expression:kidney, blood, myeloid cell
CTD
RGD
PMID:16596207 PMID:11846206 PMID:18566400 RGD:2289960, RGD:2301250 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Fmn2 formin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr13:86,454,256...86,771,437 JBrowse link
G Fn1 fibronectin 1 severity ISO RGD PMID:20860816 RGD:7205637 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Fpgt fucose-1-phosphate guanylyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 2:244,099,031...244,119,967 JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 disease_progression ISO RGD PMID:25900027 RGD:11352663 NCBI chr 7:52,711,255...52,792,738 JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase treatment ISO RGD PMID:30648791 RGD:329812005 NCBI chr19:31,456,749...31,865,011 JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:10962030 RGD:2301426 NCBI chr 3:145,992,762...146,012,528 JBrowse link
G Gjb1 gap junction protein, beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18264126 NCBI chr  X:66,501,848...66,509,783 JBrowse link
G Grb7 growth factor receptor bound protein 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr10:83,443,387...83,453,057 JBrowse link
G Gsr glutathione-disulfide reductase ISO protein:decreased expression:kidney: RGD PMID:18312938 RGD:7257550 NCBI chr16:65,185,574...65,228,742 JBrowse link
G Gstm1 glutathione S-transferase mu 1 susceptibility ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18566013 PMID:26656529 PMID:14504370 RGD:2293845 NCBI chr 2:198,338,005...198,346,007 JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:15108329 PMID:20464042 RGD:8547946 NCBI chr 1:210,767,237...210,770,242 JBrowse link
G Gstt1 glutathione S-transferase theta 1 susceptibility ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:18566013 PMID:26656529 PMID:14504370 RGD:2293845 NCBI chr20:12,856,068...12,873,020 JBrowse link
G Hars1 histidyl-tRNA synthetase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr18:28,655,669...28,672,712 JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 disease_progression ISO RGD PMID:23352434 RGD:7245470 NCBI chr10:31,118,667...31,151,730 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 susceptibility ISO DNA:polymorphisms: :-574G>T, +4259T>G (human) RGD PMID:22472081 RGD:7245505 NCBI chr10:30,882,484...30,914,018 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha disease_progression ISO RGD PMID:19302703 RGD:2306222 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hnf1a HNF1 homeobox A ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hnf1b HNF1 homeobox B ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr10:68,735,894...68,789,888 JBrowse link
G Hoxb13 homeo box B13 disease_progression ISO DNA:hypermethylation RGD PMID:16278676 RGD:2314729 NCBI chr10:81,160,498...81,162,777 JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr18:26,536,131...26,554,294 JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr12:26,430,640...26,432,301 JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 9:64,073,610...64,084,332 JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:17952403 RGD:7242846 NCBI chr 1:130,959,787...131,248,664 JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO RGD PMID:18076934 RGD:2290003 NCBI chr14:86,270,208...86,277,944 JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 IEP mRNA:decreased expression:kidney RGD PMID:10854235 RGD:1626565 NCBI chr14:30,737,414...30,797,317 JBrowse link
G Il13 interleukin 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22317767 NCBI chr10:38,290,926...38,293,483 JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO RGD PMID:17031403 RGD:6907413 NCBI chr 3:27,509,836...27,525,738 JBrowse link
G Il2 interleukin 2 ISO RGD PMID:21812652 RGD:5147871 NCBI chr 2:121,932,968...121,937,672 JBrowse link
G Il4r interleukin 4 receptor susceptibility
disease_progression
ISO DNA:polymorphism:cds:p.I50V (human)
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:22317767 PMID:30472377 PMID:22317767 PMID:12171893 RGD:7207066, RGD:7207070 NCBI chr 1:180,115,061...180,139,981 JBrowse link
G Il6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7834629 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Il6r interleukin 6 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:7834629 NCBI chr 2:177,582,020...177,646,705 JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29415082 NCBI chr19:42,824,710...43,575,039 JBrowse link
G Insr insulin receptor ISO RGD PMID:15753986 RGD:2290462 NCBI chr12:5,991,135...6,129,275 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:16006965 RGD:1549443 NCBI chr 5:115,009,900...115,012,993 JBrowse link
G Jup junction plakoglobin ISO RGD PMID:15701841 PMID:9891472 RGD:2291866, RGD:2291890 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 ISO DNA, mRNA, protein:hypermethylation, decreased expression:kidney RGD PMID:12133830 RGD:2315654 NCBI chr 1:232,381,720...232,500,834 JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO protein:increased expression:kidney (human) RGD PMID:18777199 RGD:9693695 NCBI chr13:103,722,140...104,024,762 JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr15:302,480...1,007,675 JBrowse link
G Kdm4c lysine demethylase 4C ISO DNA:deletion:cds (human) RGD PMID:22483639 RGD:9587741 NCBI chr 5:88,100,710...88,306,821 JBrowse link
G Kdm5c lysine demethylase 5C ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr  X:21,345,459...21,387,045 JBrowse link
G Kdm6a lysine demethylase 6A ISO mRNA, protein:increased expression:kidney (human) RGD PMID:23057811 RGD:9587837 NCBI chr  X:6,920,374...7,060,027 JBrowse link
G Kdm6b lysine demethylase 6B ISO mRNA, protein:increased expression:kidney (human) RGD PMID:23057811 RGD:9587837 NCBI chr10:54,120,716...54,142,212 JBrowse link
G Kdr kinase insert domain receptor treatment ISO RGD PMID:17653245 PMID:16763608 PMID:17332933 RGD:2301756, RGD:126925190, RGD:8552363 NCBI chr14:32,572,031...32,615,204 JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 8:19,768,375...19,777,862 JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO chromophobe RCC only
papillary RCC only
RGD PMID:15780567 PMID:15073597 RGD:2292414, RGD:2292421 NCBI chr14:32,901,615...32,978,895 JBrowse link
G Klk6 kallikrein related-peptidase 6 ISO protein:decreased expression:kidney RGD PMID:16340244 RGD:2314864 NCBI chr 1:94,278,863...94,286,136 JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO mRNA:increased expression:kidney RGD PMID:11851621 RGD:2314914 NCBI chr 4:179,916,255...179,949,613 JBrowse link
G Krt32 keratin 32 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr10:85,013,551...85,020,578 JBrowse link
G Krt7 keratin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 PMID:16927643 NCBI chr 7:134,407,626...134,423,787 JBrowse link
G Krt8 keratin 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:135,002,886...135,010,339 JBrowse link
G L1cam L1 cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:21097529 NCBI chr  X:151,597,270...151,623,776 JBrowse link
G Ldhb lactate dehydrogenase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:175,428,382...175,446,403 JBrowse link
G Lep leptin resistance ISO RGD PMID:19278051 RGD:6907119 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Lman2l lectin, mannose-binding 2-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 9:38,661,709...38,685,244 JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase ISO RGD PMID:17692401 RGD:2314919 NCBI chr 1:66,931,712...67,027,610 JBrowse link
G Lrp1b LDL receptor related protein 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 3:24,594,302...26,715,037 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Ltf lactotransferrin ISO RGD PMID:23201854 RGD:7243106 NCBI chr 8:110,999,948...111,022,795 JBrowse link
G M6pr mannose-6-phosphate receptor, cation dependent ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 4:155,501,080...155,510,219 JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor susceptibility ISO RGD PMID:8649854 RGD:1599220 NCBI chr 8:107,500,856...107,551,595 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO RGD PMID:7664295 PMID:18172299 RGD:2292629, RGD:2292630 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Mapk1 mitogen activated protein kinase 1 susceptibility ISO DNA:missense mutation: :multiple RGD PMID:22517515 RGD:13504815 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic
ClinVar Annotator: match by term: RENAL CELL CARCINOMA WITH PARANEOPLASTIC ERYTHROCYTOSIS | ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic
ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma with paraneoplastic erythrocytosis | ClinVar Annotator: match by term: Renal cell carcinoma, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:1104268 PMID:9140397 PMID:9326629 PMID:9536098 PMID:9563489 More... RGD:1600122 NCBI chr 4:46,756,823...46,864,041 JBrowse link
G Mgp matrix Gla protein disease_progression ISO RGD PMID:1399132 RGD:2293578 NCBI chr 4:171,497,472...171,500,888 JBrowse link
G Mir31 microRNA 31 severity ISO RNA:decreased expression:proximal convoluted tubule (human) RGD PMID:30597305 RGD:153297805 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mitf melanocyte inducing transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:22012259 NCBI chr 4:131,965,676...132,177,790 JBrowse link
G Mlh1 mutL homolog 1 ISO protein:decreased expression:kidney RGD PMID:16426918 RGD:2293509 NCBI chr 8:120,074,871...120,112,109 JBrowse link
G Mllt10 MLLT10, histone lysine methyltransferase DOT1L cofactor ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr17:85,729,964...85,857,791 JBrowse link
G Mmp1 matrix metallopeptidase 1 susceptibility
no_association
ISO DNA:insertion:promoter:g.-1607insG (human) RGD PMID:12845675 PMID:17980059 RGD:7207023, RGD:7207082 NCBI chr 8:12,943,453...12,963,966 JBrowse link
G Mmp2 matrix metallopeptidase 2 disease_progression ISO protein:increased expression:kidney
mRNA:decreased expression:kidney
RGD PMID:17572184 PMID:18035688 RGD:2290359, RGD:2290358 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO DNA:missense mutation:cds:p.E45K rs679620 (human) RGD PMID:15319295 PMID:19551141 RGD:7207067, RGD:7241233 NCBI chr 8:12,925,267...12,938,828 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA:increased expression:kidney RGD PMID:18035688 RGD:2290358 NCBI chr 3:174,103,474...174,111,434 JBrowse link
G Mok MOK protein kinase ISO mRNA:increased expression:kidney RGD PMID:15900605 RGD:7243170 NCBI chr 6:135,645,018...135,675,894 JBrowse link
G Msgn1 mesogenin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 6:33,912,787...33,913,427 JBrowse link
G Msh2 mutS homolog 2 ISO protein:decreased expression:kidney
ClinVar Annotator: match by term: Renal adenocarcinoma
ClinVar
RGD
PMID:18325052 PMID:21926548 PMID:24506336 PMID:24763289 PMID:25637381 More... RGD:2293509 NCBI chr 6:12,567,368...12,626,534 JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:missense mutation:cds:p.A222V (rs1801133) (human) RGD PMID:18098291 RGD:6893654 NCBI chr 5:163,748,346...163,768,141 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Renal adenocarcinoma
ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:20190810 PMID:22729223 PMID:23797736 PMID:24631838 PMID:25599672 More... RGD:7207420 NCBI chr 5:164,167,985...164,277,438 JBrowse link
G Muc1 mucin 1, cell surface associated disease_progression ISO RGD PMID:10390012 RGD:7245968 NCBI chr 2:176,933,312...176,938,497 JBrowse link
G Muc4 mucin 4, cell surface associated ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr11:68,008,245...68,053,242 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
IEP
mRNA:increased expression:kidney (human)
protein:increased expression:kidney (rat)
RGD PMID:21982273 PMID:18055543 RGD:7207793, RGD:7207841 NCBI chr 7:95,483,105...95,488,031 JBrowse link
G Nav3 neuron navigator 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 7:46,938,577...47,726,839 JBrowse link
G Ndrg1 N-myc downstream regulated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:100,573,526...100,614,902 JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor ISO
ISS
OMIM:300854
CTD Direct Evidence: marker/mechanism
MouseDO
CTD
RGD
PMID:25401301 PMID:19487675 RGD:2315000 NCBI chr14:79,627,399...79,710,709 JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO ClinVar Annotator: match by term: Renal adenocarcinoma ClinVar PMID:26619011 NCBI chr 3:81,001,529...81,031,165 JBrowse link
G Nlrp12 NLR family, pyrin domain containing 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 1:65,932,610...65,969,873 JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 disease_progression ISO RGD PMID:9663430 RGD:2299059 NCBI chr10:79,403,939...79,426,620 JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO mRNA:increased expression:kidney
mRNA:increased expression:kidney (human)
RGD PMID:17070307 PMID:15682440 RGD:2299120, RGD:401793726 NCBI chr 8:48,928,663...48,947,734 JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 severity
treatment
ISO RGD PMID:21531004 PMID:18181043 RGD:7174727, RGD:7174733 NCBI chr18:31,522,783...31,644,508 JBrowse link
G Nrp1 neuropilin 1 disease_progression ISO RGD PMID:31880322 RGD:401901169 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP
ISO
ClinVar Annotator: match by term: OGG1-related condition
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
RGD
PMID:25741868 PMID:28492532 PMID:18218111 PMID:10987279 RGD:2317140, RGD:1600295 NCBI chr 4:148,030,237...148,037,599 JBrowse link
G Or4c105 olfactory receptor family 4 subfamily C member 105 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 3:74,582,417...74,583,346 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:17621631 PMID:17621631 RGD:2299159 NCBI chr 1:161,522,399...161,637,623 JBrowse link
G Pbrm1 polybromo 1 ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
RGD
PMID:22138691 PMID:23797736 PMID:21654818 RGD:6907137 NCBI chr16:6,219,933...6,319,336 JBrowse link
G Pcna proliferating cell nuclear antigen severity ISO RGD PMID:11369057 RGD:2315008 NCBI chr 3:139,951,948...139,955,820 JBrowse link
G Pdcd1 programmed cell death 1 disease_progression ISO RGD PMID:17363529 RGD:7248680 NCBI chr 9:101,866,124...101,879,278 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha disease_progression ISO protein:increased expression:kidney RGD PMID:12866380 RGD:2292157 NCBI chr14:33,360,027...33,408,604 JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO mRNA:increased expression:kidney RGD PMID:15994946 PMID:16865223 RGD:2292198, RGD:2290496 NCBI chr18:56,770,348...56,809,228 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr15:19,182,789...19,188,731 JBrowse link
G Pdpn podoplanin disease_progression ISO RGD PMID:18291512 RGD:2292239 NCBI chr 5:155,601,691...155,635,656 JBrowse link
G Pdxdc1 pyridoxal-dependent decarboxylase domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr10:2,025,056...2,113,712 JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25329396 NCBI chr12:44,946,307...44,967,890 JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase ISO RGD PMID:6722784 RGD:5135276 NCBI chr10:54,189,157...54,210,685 JBrowse link
G Pgf placental growth factor disease_progression ISO protein:increased expression:plasma RGD PMID:14981951 RGD:13506645 NCBI chr 6:110,547,165...110,557,747 JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr  X:75,336,988...75,352,962 JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 1:205,966,392...205,972,359 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma
CTD
ClinVar
PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 2:117,103,643...117,177,411 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 disease_progression ISO RGD PMID:25757764 RGD:13504823 NCBI chr 2:34,612,946...34,697,660 JBrowse link
G Plau plasminogen activator, urokinase severity ISO mRNA:increased expression:kidney (human) RGD PMID:20544684 RGD:7241133 NCBI chr15:3,505,485...3,511,987 JBrowse link
G Pld2 phospholipase D2 ISO protein:increased expression:kidney RGD PMID:11185526 RGD:2299898 NCBI chr10:55,754,957...55,772,819 JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 ISO mRNA:increased expression:kidney RGD PMID:11568975 RGD:2315108 NCBI chr 3:162,011,884...162,060,343 JBrowse link
G Pnkd PNKD metallo-beta-lactamase domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr 9:75,868,620...75,937,126 JBrowse link
G Pomc proopiomelanocortin ISO CTD Direct Evidence: marker/mechanism CTD PMID:2844640 NCBI chr 6:32,659,137...32,665,175 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IEP protein:increased activity:tumor (rat) RGD PMID:476627 RGD:5135050 NCBI chr14:31,215,741...31,250,144 JBrowse link
G Pramex1 PRAME like, X-linked 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16179254 NCBI chr  X:102,862,457...102,867,725 JBrowse link
G Prcc proline rich mitotic checkpoint control factor ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Renal cell carcinoma, somatic
CTD
ClinVar
PMID:25741868 NCBI chr 2:173,326,261...173,351,799 JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO DNA:snp:promoter:g.-151G>T (human) RGD PMID:11788900 RGD:9999148 NCBI chr20:4,668,952...4,674,421 JBrowse link
G Pten phosphatase and tensin homolog disease_progression ISO
IEP
ClinVar Annotator: match by term: Renal adenocarcinoma
ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma
protein:decreased expression:kidney (rat)
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:1945792 PMID:9467011 PMID:9915974 PMID:10866302 PMID:11504908 More... RGD:1643331, RGD:12802360, RGD:2292513, RGD:2292500 NCBI chr 1:240,043,707...240,110,330 JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IEP mRNA:increased expression:kidney RGD PMID:12708469 RGD:2300212 NCBI chr 3:39,981,419...40,002,993 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 disease_progression IEP
ISO
mRNA:decreased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD
RGD
PMID:12664575 PMID:12708469 PMID:17899436 RGD:2300212, RGD:2300204 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Pvalb parvalbumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16927643 NCBI chr 7:111,653,820...111,668,469 JBrowse link
G Rassf1 Ras association domain family member 1 ISO DNA:hypermethylation:promoter RGD PMID:17645803 PMID:12222680 RGD:2299866, RGD:2291977 NCBI chr 8:117,103,665...117,114,805 JBrowse link
G Rb1 RB transcriptional corepressor 1 disease_progression ISO RGD PMID:11549509 RGD:2299893 NCBI chr15:54,780,858...54,911,989 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:kidney
CTD
RGD
PMID:18089796 PMID:17290398 PMID:12663495 RGD:2298755, RGD:2298771 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Rnf139 ring finger protein 139 ISO CTD Direct Evidence: marker/mechanism CTD
OMIM
RGD
PMID:9689122 PMID:17539022 RGD:1599629, RGD:2289870 NCBI chr 7:90,439,726...90,450,911 JBrowse link
G Rpl14 ribosomal protein L14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 8:120,286,035...120,289,160 JBrowse link
G RT1-Db1 RT1 class II, locus Db1 susceptibility
disease_progression
ISO RGD PMID:9044854 PMID:12771724 PMID:10895068 RGD:2314704, RGD:2314695, RGD:2314701 NCBI chr20:4,548,664...4,558,237 JBrowse link
G Ryr1 ryanodine receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:84,292,578...84,423,824 JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21131975 NCBI chr12:36,957,302...37,023,982 JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO ClinVar Annotator: match by term: Renal cell carcinoma ClinVar
RGD
PMID:18728283 PMID:19576851 PMID:22835832 PMID:24055113 PMID:24092654 More... RGD:6907134 NCBI chr 5:158,547,775...158,568,589 JBrowse link
G Sdhd succinate dehydrogenase complex subunit D ISO RGD PMID:21771581 RGD:6907134 NCBI chr 8:59,841,090...59,850,641 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:22138691 PMID:23797736 PMID:21654818 RGD:6907137 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO mRNA:decreased expression:kidney RGD PMID:20420713 RGD:4107084 NCBI chr16:75,278,325...75,316,736 JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18404682 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:103,944,416...103,993,887 JBrowse link
G Skp2 S-phase kinase associated protein 2 disease_progression ISO RGD PMID:18922157 RGD:2315038 NCBI chr 2:59,888,406...59,916,471 JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7921415 NCBI chr 5:138,002,522...138,030,742 JBrowse link
G Slc49a4 solute carrier family 49 member 4 susceptibility ISO DNA:translocation:intron:t(2;3)(q35;q21) RGD PMID:11912179 RGD:1601072 NCBI chr11:64,995,629...65,068,929 JBrowse link
G Slc5a3 solute carrier family 5 member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr11:31,313,847...31,316,293 JBrowse link
G Smad2 SMAD family member 2 severity ISO protein:decreased expression:kidney RGD PMID:11332076 RGD:2299973 NCBI chr18:72,124,792...72,193,345 JBrowse link
G Smad4 SMAD family member 4 severity ISO protein:decreased expression:kidney RGD PMID:11332076 RGD:2299973 NCBI chr18:69,518,988...69,549,684 JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 disease_progression ISO RGD PMID:33532313 RGD:127285652 NCBI chr 8:118,986,917...119,093,161 JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:50,043,323...50,050,168 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO mRNA, protein:increased expression:kidney RGD PMID:11679940 RGD:2300025 NCBI chr10:39,516,394...39,538,252 JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 disease_progression ISO protein:decreased expression:kidney
protein:increased expression:serum
RGD PMID:10508484 PMID:11176522 RGD:2300388, RGD:2300387 NCBI chr18:35,870,723...35,882,693 JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:82,650,750...82,738,345 JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO protein:increased expression:kidney RGD PMID:16501837 RGD:2315090 NCBI chr 8:29,540,805...29,581,704 JBrowse link
G ST7 suppression of tumorigenicity 7 ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic ClinVar PMID:28492532 NCBI chr 4:46,041,655...46,289,745 JBrowse link
G Stat3 signal transducer and activator of transcription 3 disease_progression ISO DNA:snp
protein:increased phosphorylation:kidney
RGD PMID:17602083 PMID:12131365 RGD:2291913, RGD:2291917 NCBI chr10:86,311,528...86,363,513 JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 6:100,272,729...100,586,364 JBrowse link
G Tagln2 transgelin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr13:87,499,350...87,506,328 JBrowse link
G Terc telomerase RNA component ISO RNA:decreased expression:kidney RGD PMID:11156238 RGD:2291972 NCBI chr 2:112,815,654...112,816,041 JBrowse link
G Tert telomerase reverse transcriptase ISO mRNA, protein:increased expression:kidney RGD PMID:18250061 RGD:2291980 NCBI chr 1:29,637,213...29,659,561 JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 2:221,988,645...222,072,813 JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 ISO ClinVar Annotator: match by term: Renal cell carcinoma
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:25741868 PMID:28492532 PMID:30595499 PMID:32409512 PMID:35346031 More... RGD:1599384 NCBI chr  X:14,729,547...14,742,830 JBrowse link
G Tfrc transferrin receptor ISO protein:increased expression:kidney, T cell
mRNA:decreased expression:kidney, T cell
RGD PMID:12394762 PMID:8050820 RGD:2292024, RGD:2292025 NCBI chr11:81,668,478...81,690,318 JBrowse link
G Tgfb1 transforming growth factor, beta 1 disease_progression ISO protein:increased expression:peripheral blood RGD PMID:26749573 PMID:25499257 PMID:26631499 RGD:11560966, RGD:13506175, RGD:13506173 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tgm2 transglutaminase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 3:167,192,612...167,221,845 JBrowse link
G Thra thyroid hormone receptor alpha ISO DNA:mutations (human) RGD PMID:11756220 RGD:2315097 NCBI chr10:84,198,141...84,225,659 JBrowse link
G Thrb thyroid hormone receptor beta ISO DNA:mutations (human) RGD PMID:11756220 RGD:2315097 NCBI chr15:10,115,954...10,465,231 JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 disease_progression ISO protein:increased expression:kidney RGD PMID:11595703 RGD:2290350 NCBI chr  X:3,766,509...3,772,578 JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 disease_progression ISO protein:increased expression:kidney
mRNA:decreased expression:kidney
RGD PMID:17572184 PMID:18035688 RGD:2290359, RGD:2290358 NCBI chr10:104,041,604...104,089,214 JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO mRNA:decreased expression:kidney RGD PMID:11576837 RGD:2290421 NCBI chr 7:19,408,539...19,459,558 JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO mRNA:decreased expression:kidney RGD PMID:11576837 RGD:2290421 NCBI chr 4:148,306,021...148,312,558 JBrowse link
G Tlr9 toll-like receptor 9 severity ISO protein:decreased expression:tumor, cytoplasm (human) RGD PMID:21929816 RGD:7246915 NCBI chr 8:115,743,407...115,747,523 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:19384924 PMID:19904265 RGD:2315119, RGD:2315113 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Tnfrsf10b TNF receptor superfamily member 10b ISO mRNA:increased expression:kidney RGD PMID:16865223 PMID:17184908 RGD:2290496, RGD:2290491 NCBI chr15:51,249,883...51,278,091 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO protein:increased expression:serum (human) RGD PMID:7912320 RGD:5131437 NCBI chr 4:159,837,119...159,849,817 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO RGD PMID:20566746 RGD:7245512 NCBI chr 5:157,070,642...157,104,216 JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:20403343 NCBI chr 2:112,136,550...112,155,903 JBrowse link
G Tp53 tumor protein p53 disease_progression ISO ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma
ClinVar Annotator: match by term: Renal adenocarcinoma | ClinVar Annotator: match by term: Renal cell carcinoma | ClinVar Annotator: match by term: Renal cell carcinoma, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
RGD
PMID:1349175 PMID:1565143 PMID:1565144 PMID:1631137 PMID:1644930 More... RGD:2290544 NCBI chr10:54,798,871...54,810,300 JBrowse link
G Tp73 tumor protein p73 ISO RGD PMID:9796703 RGD:2291837 NCBI chr 5:169,903,801...169,988,075 JBrowse link
G Tsc1 TSC complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 3:32,367,434...32,416,565 JBrowse link
G Tsc2 TSC complex subunit 2 treatment ISO
IAGP
IMP
DNA:nonsense mutations;missense mutations; splice-site mutation:multiple RGD PMID:10096549 PMID:10029074 PMID:18695678 RGD:11568655, RGD:68666, RGD:11568661 NCBI chr10:14,125,679...14,160,317 JBrowse link
G Txnip thioredoxin interacting protein IDA DNA, mRNA, protein:hypermethylation, decreased expression:promoter, kidney RGD PMID:15834431 RGD:1642756 NCBI chr 2:186,781,933...186,785,736 JBrowse link
G Tymp thymidine phosphorylase severity ISO protein:increased expression:kidney RGD PMID:12614261 PMID:16861722 RGD:2293723, RGD:2293717 NCBI chr 7:122,318,396...122,323,716 JBrowse link
G Unc5c unc-5 netrin receptor C ISO CTD Direct Evidence: marker/mechanism CTD PMID:21600761 NCBI chr 2:230,180,353...230,535,219 JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked ISO mRNA, protein:increased expression:kidney (human) RGD