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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Experimental Neoplasms
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Accession:DOID:9002170 term browser browse the term
Definition:Experimentally induced new abnormal growth of TISSUES in animals to provide models for studying human neoplasms.
Synonyms:exact_synonym: Experimental Neoplasm
 primary_id: MESH:D009374
For additional species annotation, visit the Alliance of Genome Resources.


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Experimental Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19878872 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Ahr aryl hydrocarbon receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:9496914 NCBI chrNW_004936546:3,737,908...3,783,492 JBrowse link
G Arl6ip5 ADP ribosylation factor like GTPase 6 interacting protein 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29545876 NCBI chrNW_004936603:1,524,959...1,549,923 JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO CTD Direct Evidence: marker/mechanism CTD PMID:9496914 NCBI chrNW_004936580:1,038,420...1,093,319 JBrowse link
G Axl AXL receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:26206560 NCBI chrNW_004936661:3,658,140...3,687,290 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:19878872 NCBI chrNW_004936619:288,377...432,297 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28030816 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Bsg basigin (Ok blood group) ISO CTD Direct Evidence: marker/mechanism CTD PMID:21165561 NCBI chrNW_004936588:181,688...189,795 JBrowse link
G Ccnd1 cyclin D1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20932960
G Cdh1 cadherin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27224422 NCBI chrNW_004936475:18,990,529...19,065,954 JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20932960 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Ctcf CCCTC-binding factor ISO human breast cancer cells in mouse model RGD PMID:21896759 RGD:151356745 NCBI chrNW_004936475:17,987,137...18,031,733 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 treatment ISO human cancer cells in mouse model RGD PMID:26719540 RGD:11520844 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Eno2 enolase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22613180 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14612517 NCBI chrNW_004936490:14,887,062...14,910,038 JBrowse link
G Ergic3 ERGIC and golgi 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27588471 NCBI chrNW_004936561:5,256,450...5,270,073 JBrowse link
G Esrra estrogen related receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:34524571 NCBI chrNW_004936599:4,898,534...4,922,758 JBrowse link
G F2r coagulation factor II thrombin receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:17374729 NCBI chrNW_004936549:226,508...247,024 JBrowse link
G Hdac6 histone deacetylase 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34524571 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Hgf hepatocyte growth factor ISO CTD Direct Evidence: therapeutic CTD PMID:21273587 NCBI chrNW_004936734:354,798...428,356 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:28574600 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Hras HRas proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:3433577 PMID:11552296 PMID:26558449 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Hrh2 histamine receptor H2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:6224980 NCBI chrNW_004936609:624,446...664,049 JBrowse link
G Ifnb1 interferon beta 1 ISO CTD Direct Evidence: therapeutic CTD PMID:2297754 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Ifng interferon gamma ISO CTD Direct Evidence: therapeutic CTD PMID:15711825 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Il12a interleukin 12A ISO CTD Direct Evidence: therapeutic CTD PMID:17332360 NCBI chrNW_004936519:6,166,060...6,180,652 JBrowse link
G Il12b interleukin 12B ISO CTD Direct Evidence: therapeutic CTD PMID:17332360 NCBI chrNW_004936515:4,056,214...4,066,121 JBrowse link
G Il2 interleukin 2 ISO CTD Direct Evidence: therapeutic CTD PMID:1949363 PMID:3495671 PMID:22306178 NCBI chrNW_004936662:1,594,953...1,599,625 JBrowse link
G Itgav integrin subunit alpha V treatment ISO human cells in rat model RGD PMID:20841470 RGD:152998949 NCBI chrNW_004936506:10,750,116...10,839,018 JBrowse link
G Kif11 kinesin family member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17974955 NCBI chrNW_004936601:2,163,316...2,213,674 JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:9205081 PMID:10813127 PMID:21311774 PMID:25851810 PMID:26390243 NCBI chrNW_004936548:2,078,568...2,113,877 JBrowse link
G Ldha lactate dehydrogenase A ISO RGD PMID:11085542 RGD:1600281 NCBI chrNW_004936528:866,607...879,977 JBrowse link
G Lect2 leukocyte cell derived chemotaxin 2 ISO CTD Direct Evidence: therapeutic CTD PMID:30453282 NCBI chrNW_004936597:3,051,143...3,057,383 JBrowse link
G LOC101959784 prion protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:21265952 NCBI chrNW_004936485:14,104,829...14,118,614 JBrowse link
G Mapk7 mitogen-activated protein kinase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29507229 NCBI chrNW_004936881:372,713...377,655 JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:9496914 PMID:21034357 NCBI chrNW_004936475:19,771,384...19,785,034 JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:9205081 NCBI chrNW_004936627:73,413...82,590 JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO CTD Direct Evidence: therapeutic CTD PMID:33044785 NCBI chrNW_004936728:428,028...538,413 JBrowse link
G Pcna proliferating cell nuclear antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:20932960 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Polr1h RNA polymerase I subunit H ISO CTD Direct Evidence: marker/mechanism CTD PMID:16609701 NCBI chrNW_004936723:979,076...983,814 JBrowse link
G Prl prolactin treatment ISO RGD PMID:26983879 RGD:152177690 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Puf60 poly(U) binding splicing factor 60 ISO CTD Direct Evidence: therapeutic CTD PMID:21435101 NCBI chrNW_004936470:8,336,852...8,348,335 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27137931 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:20932960 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Rictor RPTOR independent companion of MTOR complex 2 disease_progression ISO RGD PMID:24244675 RGD:152995458 NCBI chrNW_004936518:3,198,312...3,314,393 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO CTD Direct Evidence: therapeutic CTD PMID:20164124 NCBI chrNW_004936515:11,026,156...11,046,812 JBrowse link
G Spp1 secreted phosphoprotein 1 ISO CTD Direct Evidence: therapeutic CTD PMID:21852811 NCBI chrNW_004936905:148,956...156,023 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29507229 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Stim1 stromal interaction molecule 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27863410 NCBI chrNW_004936498:849,775...1,063,552 JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: therapeutic CTD PMID:1674182 PMID:3361654 PMID:12627504 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:17767197 PMID:24345465 NCBI chrNW_004936593:212,642...230,645 JBrowse link
G Tob1 transducer of ERBB2, 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12756225 NCBI chrNW_004936490:10,876,113...10,880,267 JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12756225 PMID:27137931 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Tp63 tumor protein p63 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25739959 NCBI chrNW_004936578:492,267...705,282 JBrowse link
G Trim47 tripartite motif containing 47 ISO CTD Direct Evidence: marker/mechanism CTD PMID:31981573 NCBI chrNW_004936594:1,049,308...1,053,533 JBrowse link
G Txn thioredoxin ISO CTD Direct Evidence: marker/mechanism CTD PMID:28574600 NCBI chrNW_004936559:2,811,786...2,822,528 JBrowse link
G Uri1 URI1 prefoldin like chaperone ISO CTD Direct Evidence: marker/mechanism CTD PMID:21397856 NCBI chrNW_004936570:5,379,253...5,419,595 JBrowse link
G Vegfa vascular endothelial growth factor A ISO CTD Direct Evidence: marker/mechanism|therapeutic CTD PMID:20376344 PMID:20932960 PMID:28574600 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
Avian Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhob ras homolog family member B ISO RGD PMID:1710770 RGD:704375 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
Carcinoma, Lewis Lung term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 treatment ISO RGD PMID:16947020 RGD:7401280 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Coq7 coenzyme Q7, hydroxylase susceptibility ISO RGD PMID:23166727 RGD:10402105 NCBI chrNW_004936501:5,035,986...5,043,864 JBrowse link
G Csf1r colony stimulating factor 1 receptor ameliorates ISO mouse cell line in a mouse model RGD PMID:20008303 RGD:150524291 NCBI chrNW_004936504:4,898,947...4,927,195 JBrowse link
G Il18 interleukin 18 treatment ISO RGD PMID:16767432 RGD:8655941 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Il2 interleukin 2 treatment ISO RGD PMID:9399664 RGD:8663451 NCBI chrNW_004936662:1,594,953...1,599,625 JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:21278795 RGD:36049796 NCBI chrNW_004936545:4,233,353...4,284,324 JBrowse link
G Jam3 junctional adhesion molecule 3 ISO RGD PMID:15994945 RGD:7488936 NCBI chrNW_004936684:1,689,594...1,762,066 JBrowse link
G Lect2 leukocyte cell derived chemotaxin 2 ISO CTD Direct Evidence: therapeutic CTD PMID:30453282 NCBI chrNW_004936597:3,051,143...3,057,383 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 ameliorates ISO mouse cell line in a mouse model RGD PMID:29907597 RGD:151665504 NCBI chrNW_004936476:23,237,762...23,310,211 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor treatment ISO mouse cell line in a mouse model RGD PMID:26111447 RGD:150521531 NCBI chrNW_004936473:27,672,237...27,676,339 JBrowse link
G Txnrd1 thioredoxin reductase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16565519 NCBI chrNW_004936492:10,185,096...10,244,466 JBrowse link
Ehrlich tumor carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 molecule treatment ISO RGD PMID:19269163 RGD:11352683 NCBI chrNW_004936514:6,936,915...6,947,246 JBrowse link
G Cd40lg CD40 ligand treatment ISO RGD PMID:19269163 RGD:11352683 NCBI chrNW_004936513:10,607,617...10,620,403 JBrowse link
G Ceacam20 CEA cell adhesion molecule 20 ISO CTD Direct Evidence: marker/mechanism CTD PMID:34605108 NCBI chrNW_004936706:1,286,911...1,298,129 JBrowse link
Experimental Leukemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbl Cbl proto-oncogene treatment ISO RGD PMID:20890046 RGD:11038805 NCBI chrNW_004936542:4,136,389...4,235,746 JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:25434821 RGD:11352713 NCBI chrNW_004936492:2,411,171...2,428,484 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 treatment ISO RGD PMID:22781593 RGD:11352669 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Il1a interleukin 1 alpha treatment ISO RGD PMID:2117483 RGD:11051972 NCBI chrNW_004936783:1,210,715...1,218,315 JBrowse link
G Lat2 linker for activation of T cells family member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32587277 NCBI chrNW_004936543:3,250,956...3,262,668 JBrowse link
G Nras NRAS proto-oncogene, GTPase induced ISO DNA:transversion mutation, loss of heterozygosity:cds: RGD PMID:9142215 RGD:11535063 NCBI chrNW_004936627:73,413...82,590 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:32417439 NCBI chrNW_004936668:2,602,261...2,687,903 JBrowse link
Experimental Liver Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 ISO RGD PMID:15853769 RGD:1598580 NCBI chrNW_004936469:10,521,576...10,599,005 JBrowse link
G Adsl adenylosuccinate lyase ISO protein:increased activity:liver (rat) RGD PMID:2937404 RGD:1598766 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Agps alkylglycerone phosphate synthase ISO RGD PMID:7407223 RGD:1598794 NCBI chrNW_004936509:6,742,800...6,872,045 JBrowse link
G Alas2 5'-aminolevulinate synthase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936751:1,818,255...1,841,028 JBrowse link
G Apoa4 apolipoprotein A4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936542:2,098,683...2,101,127 JBrowse link
G Apoc2 apolipoprotein C2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936706:1,531,219...1,531,921 JBrowse link
G Arid1a AT-rich interaction domain 1A disease_progression ISO RGD PMID:26569409 RGD:11344640 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Arrb2 arrestin beta 2 ISO mRNA, protein:increased expression:liver (rat) RGD PMID:21167192 RGD:5509890 NCBI chrNW_004936677:3,173,054...3,181,475 JBrowse link
G Atp7a ATPase copper transporting alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:23792645 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atp7b ATPase copper transporting beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:23792645 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bak1 BCL2 antagonist/killer 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936476:25,347,608...25,354,772 JBrowse link
G Bbc3 BCL2 binding component 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:10426811 PMID:28100771 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Bcl2l1 BCL2 like 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:10426811 PMID:22414765 PMID:28100771 RGD:11353865 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Birc5 baculoviral IAP repeat containing 5 ISO mRNA, protein:increased expression:liver RGD PMID:18246794 RGD:2293125 NCBI chrNW_004936594:2,812,165...2,820,618 JBrowse link
G Ca3 carbonic anhydrase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936544:337,437...347,760 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO protein:increased activity:liver (rat) RGD PMID:13618893 RGD:5132586 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30603057 NCBI chrNW_004936525:8,238,128...8,240,974 JBrowse link
G Ccnb1 cyclin B1 ISO mRNA:increased expression:liver RGD PMID:17342310 RGD:2315991 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Ccnd1 cyclin D1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:17055752 PMID:28100771 RGD:2289139
G Ccndbp1 cyclin D1 binding protein 1 ISO CTD Direct Evidence: therapeutic CTD PMID:16501603 NCBI chrNW_004936471:6,365,254...6,375,426 JBrowse link
G Ccng1 cyclin G1 ISO RGD PMID:27982046 RGD:151361200 NCBI chrNW_004936515:614,287...621,213 JBrowse link
G Ccng2 cyclin G2 ISO RGD PMID:27982046 RGD:151361200 NCBI chrNW_004936676:1,026,113...1,035,313 JBrowse link
G Cd40lg CD40 ligand ISO RGD PMID:19035311 RGD:5491179 NCBI chrNW_004936513:10,607,617...10,620,403 JBrowse link
G Cd63 CD63 molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936646:196,002...199,177 JBrowse link
G Cdh1 cadherin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20118494 PMID:25319454 NCBI chrNW_004936475:18,990,529...19,065,954 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO protein:decreased expression:liver: RGD PMID:8640740 RGD:8662309 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B disease_progression ISO mRNA:increased expression:liver (rat) RGD PMID:19533683 RGD:2315050 NCBI chrNW_004936587:4,573,166...4,578,480 JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C disease_progression ISO mRNA:increased expression:liver (rat)
protein:increased expression:liver (rat)
protein:decreased expression:liver (rat)
RGD PMID:3965145 PMID:19533683 PMID:26606000 RGD:11354707 RGD:152998958 RGD:2315050 NCBI chrNW_004936794:1,023,891...1,025,470 JBrowse link
G Cops5 COP9 signalosome subunit 5 ISO protein:increased expression:liver (rat) RGD PMID:26606000 RGD:11354707 NCBI chrNW_004936496:7,035,973...7,050,538 JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 severity ISO mRNA:decreased expression:liver RGD PMID:3387993 RGD:2303406 NCBI chrNW_004936586:5,739,038...5,850,317 JBrowse link
G Ctnnb1 catenin beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11280770 PMID:20118494 PMID:21147764 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936676:33,580...40,323 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) ISO protein:increased activity:liver (rat) RGD PMID:6331524 RGD:5132618 NCBI chrNW_004936475:21,863,627...21,877,660 JBrowse link
G Dtymk deoxythymidylate kinase ISO protein:increased activity:tumor (rat) RGD PMID:6244089 RGD:5133686 NCBI chrNW_004936745:282,199...289,273 JBrowse link
G Eno2 enolase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:2910524 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:7260898 RGD:11252158 NCBI chrNW_004936526:2,589,254...2,652,831 JBrowse link
G F12 coagulation factor XII ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936597:1,687,511...1,694,782 JBrowse link
G Fas Fas cell surface death receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:30737368 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Foxm1 forkhead box M1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15082532 NCBI chrNW_004936606:3,185,289...3,198,427 JBrowse link
G Gjb1 gap junction protein beta 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:1336494 PMID:18308698 RGD:7349398 NCBI chrNW_004936762:389,655...398,035 JBrowse link
G Gjb2 gap junction protein beta 2 ISO RGD PMID:1336494 RGD:7349398 NCBI chrNW_004936720:1,528,205...1,530,296 JBrowse link
G Glul glutamate-ammonia ligase ISO CTD Direct Evidence: marker/mechanism CTD PMID:20118494 PMID:21147764 NCBI chrNW_004936481:7,293,301...7,301,416 JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver (rat)
CTD
RGD
PMID:2563599 PMID:3124819 PMID:3965145 PMID:7585603 PMID:12016164 More... RGD:152998958 RGD:2317823 NCBI chrNW_004936599:2,197,681...2,200,642 JBrowse link
G Hat1 histone acetyltransferase 1 ISO protein:increased expression:liver RGD PMID:17182829 RGD:2316578 NCBI chrNW_004936509:2,105,866...2,153,089 JBrowse link
G Hgf hepatocyte growth factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:11896611 NCBI chrNW_004936734:354,798...428,356 JBrowse link
G Hras HRas proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism CTD PMID:7955063 PMID:20118494 PMID:21147764 PMID:27517622 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C ISO protein:increased expression:brainstem, cerebral cortex RGD PMID:17258772 RGD:1624998 NCBI chrNW_004936499:1,002,083...1,109,446 JBrowse link
G Igf2 insulin like growth factor 2 treatment ISO RGD PMID:22425635 RGD:10402567 NCBI chrNW_004936816:972,902...981,232 JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO RGD PMID:9652747 PMID:15057872 RGD:2311623 RGD:2311630 NCBI chrNW_004936489:11,447,043...11,523,695 JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:30737368 NCBI chrNW_004936809:1,280,254...1,306,964 JBrowse link
G Il6 interleukin 6 disease_progression ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:blood serum (mouse)
CTD
RGD
PMID:26297436 PMID:26569409 RGD:11344640 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Insr insulin receptor disease_progression ISO associated with Diabetes Mellitus, Experimental;protein:increased expression:cytoplasm,liver (rat) RGD PMID:15520221 RGD:2306052 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Jak2 Janus kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936503:111,722...243,627 JBrowse link
G Kat6a lysine acetyltransferase 6A ISO protein:increased expression:liver (rat) RGD PMID:17083329 RGD:2312274 NCBI chrNW_004936785:602,754...704,504 JBrowse link
G Kdr kinase insert domain receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:11956651 NCBI chrNW_004936482:17,537,697...17,581,320 JBrowse link
G Kras KRAS proto-oncogene, GTPase disease_progression ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (rat)
CTD
RGD
PMID:8603461 PMID:19533683 RGD:2315050 NCBI chrNW_004936548:2,078,568...2,113,877 JBrowse link
G LOC101962856 ceruloplasmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:23792645 NCBI chrNW_004936519:6,431,156...6,473,183 JBrowse link
G LOC101966155 alpha fetoprotein ISO CTD Direct Evidence: marker/mechanism CTD PMID:24012840 PMID:32961231 NCBI chrNW_004936598:2,058,474...2,077,711 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO mRNA:increased expression:liver RGD PMID:22687991 RGD:7296954 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11376689 PMID:21147764 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G LOC101973029 cytochrome P450 2E1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18056438 NCBI chrNW_004936486:19,691,822...19,702,684 JBrowse link
G LOC101977540 gastrin releasing peptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:2910524 NCBI chrNW_004936497:5,473,293...5,487,344 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO associated with Diabetes Mellitus, Experimental;protein:increased expression:liver RGD PMID:15520221 RGD:2306052 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:11956651 NCBI chrNW_004936589:2,280,803...2,390,179 JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936483:14,868,171...14,880,552 JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO mRNA, protein:increased expression, increased activity:liver
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:19528495 PMID:19539802 PMID:30603057 RGD:2325734 RGD:2325736 NCBI chrNW_004936475:7,801,356...7,825,831 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA, protein:increased expression, increased activity:liver RGD PMID:19528495 PMID:19539802 RGD:2325734 RGD:2325736 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mpeg1 macrophage expressed 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936581:3,428,515...3,436,877 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:liver (rat)
CTD
RGD
PMID:3335218 PMID:9079223 PMID:11280770 PMID:18560566 RGD:10059623 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Nos2 nitric oxide synthase 2 ISO protein:increased expression:liver RGD PMID:10383909 RGD:2325277 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Notch1 notch receptor 1 ISO protein:increased expression:liver RGD PMID:18942116 RGD:2325310 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO mRNA, protein:increased expression:liver (rat) RGD PMID:27867096 RGD:13442478 NCBI chrNW_004936475:19,771,384...19,785,034 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 susceptibility ISO RGD PMID:17283114 RGD:14701032 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
G Nr1i3 nuclear receptor subfamily 1 group I member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17172636 PMID:24769335 PMID:25656644 NCBI chrNW_004936903:527,838...533,930 JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO human gene in mouse model RGD PMID:16286660 RGD:14975105 NCBI chrNW_004936627:73,413...82,590 JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO protein:decreased expression:liver RGD PMID:7929120 RGD:1642378 NCBI chrNW_004936741:1,131,792...1,207,460 JBrowse link
G Plcl1 phospholipase C like 1 (inactive) disease_progression ISO mRNA:increased expression:liver (rat) RGD PMID:19533683 RGD:2315050 NCBI chrNW_004936506:1,124,318...1,457,842 JBrowse link
G Pml PML nuclear body scaffold ISO CTD Direct Evidence: therapeutic CTD PMID:20377131 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:761203 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO mRNA:increased expression:liver (rat) RGD PMID:2562181 RGD:8693574 NCBI chrNW_004936647:1,031,118...1,055,961 JBrowse link
G Prdx1 peroxiredoxin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27517622 NCBI chrNW_004936474:26,641,776...26,653,291 JBrowse link
G Ptgr1 prostaglandin reductase 1 ISO protein:increased expression:liver RGD PMID:24853774 RGD:14401713 NCBI chrNW_004936559:1,731,346...1,762,676 JBrowse link
G Rad51 RAD51 recombinase ISO protein:decreased expression:liver RGD PMID:17219426 RGD:2292638 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17854601 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Rgn regucalcin ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936502:12,872,938...12,891,270 JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO protein:increased expression:liver (rat) RGD PMID:12939504 RGD:9685719 NCBI chrNW_004936470:44,710,481...44,721,159 JBrowse link
G Rras2 RAS related 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21147764 NCBI chrNW_004936528:4,413,436...4,429,166 JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:15224347 RGD:2316863 NCBI chrNW_004936498:815,401...848,749 JBrowse link
G Rxra retinoid X receptor alpha ISO mRNA, protein:decreased expression:liver RGD PMID:17786350 RGD:1643105 NCBI chrNW_004936669:2,735,111...2,763,060 JBrowse link
G Slc31a1 solute carrier family 31 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23792645 NCBI chrNW_004936559:333,461...364,737 JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO mRNA:increased expression:liver RGD PMID:17498859 RGD:151357003 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15197228 NCBI chrNW_004936530:9,312,965...9,315,593 JBrowse link
G Spp1 secreted phosphoprotein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936905:148,956...156,023 JBrowse link
G Sqle squalene epoxidase ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936470:22,726,793...22,752,429 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:26297436 PMID:28100771 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tek TEK receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:11956651 NCBI chrNW_004936611:2,420,176...2,531,726 JBrowse link
G Tgfa transforming growth factor alpha ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:liver
CTD
RGD
PMID:9079223 PMID:16734725 RGD:2317490 NCBI chrNW_004936491:14,659,089...14,758,614 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28100771 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tk1 thymidine kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11420682 NCBI chrNW_004936594:2,784,891...2,794,693 JBrowse link
G Tnf tumor necrosis factor disease_progression
treatment
ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:blood serum (mouse)
Morris hepatoma
CTD
RGD
PMID:9063767 PMID:26569409 PMID:28100771 RGD:11344640 RGD:14696818 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:10626228 PMID:28100771 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Tsc22d1 TSC22 domain family member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15833021 PMID:17533171 NCBI chrNW_004936791:697,244...811,463 JBrowse link
G Vim vimentin ISO RGD PMID:19199359 RGD:6480440 NCBI chrNW_004936520:10,051,692...10,059,324 JBrowse link
G Xdh xanthine dehydrogenase ISO protein:decreased expression:liver RGD PMID:3460692 RGD:13210515 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
Experimental Melanoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 treatment ISO RGD PMID:27539851 RGD:13831304 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 treatment ISO RGD PMID:27539851 RGD:13831304 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
G Antxr1 ANTXR cell adhesion molecule 1 treatment ISO RGD PMID:19609240 PMID:19622764 RGD:9684925 RGD:9684939 NCBI chrNW_004936491:13,288,986...13,516,878 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:29179997 PMID:29438700 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Calr calreticulin ISO CTD Direct Evidence: therapeutic CTD PMID:16388313 NCBI chrNW_004936659:1,994,695...1,999,070 JBrowse link
G Ccl20 C-C motif chemokine ligand 20 treatment ISO RGD PMID:14500387 RGD:7483600 NCBI chrNW_004936525:8,238,128...8,240,974 JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 treatment ISO RGD PMID:24041689 RGD:7411680 NCBI chrNW_004936631:484,356...489,643 JBrowse link
G Egr1 early growth response 1 ISO mRNA, protein:increased expression:salivary gland (mouse) RGD PMID:19517020 RGD:5131885 NCBI chrNW_004936531:7,625,956...7,629,041 JBrowse link
G Esr2 estrogen receptor 2 severity ISO RGD PMID:20354658 RGD:8694122 NCBI chrNW_004936495:7,956,168...8,018,356 JBrowse link
G Hgf hepatocyte growth factor ISO RGD PMID:9823327 RGD:8548620 NCBI chrNW_004936734:354,798...428,356 JBrowse link
G Ifnb1 interferon beta 1 ISO CTD Direct Evidence: therapeutic CTD PMID:16417267 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ISO RGD PMID:19276165 RGD:7495758 NCBI chrNW_004936785:358,128...406,751 JBrowse link
G Il18 interleukin 18 treatment ISO RGD PMID:12230493 PMID:17411412 RGD:8655870 RGD:8655901 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Il1a interleukin 1 alpha treatment ISO RGD PMID:8061895 RGD:7794735 NCBI chrNW_004936783:1,210,715...1,218,315 JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:1966551 RGD:7401226 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Il2 interleukin 2 ISO RGD PMID:11884028 RGD:8662950 NCBI chrNW_004936662:1,594,953...1,599,625 JBrowse link
G Kdm1a lysine demethylase 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:29438700 NCBI chrNW_004936474:8,262,913...8,319,089 JBrowse link
G Kdm4c lysine demethylase 4C ISO CTD Direct Evidence: marker/mechanism CTD PMID:29438700 NCBI chrNW_004936539:1,198,105...1,580,078 JBrowse link
G Mc1r melanocortin 1 receptor ISO RGD PMID:20126537 RGD:5687319 NCBI chrNW_004936641:193,885...198,730 JBrowse link
G Pdcd1 programmed cell death 1 treatment ISO RGD PMID:19208793 RGD:9589070 NCBI chrNW_004936745:152,571...163,712 JBrowse link
G Pten phosphatase and tensin homolog ISO CTD Direct Evidence: marker/mechanism CTD PMID:29179997 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Pxn paxillin ISO CTD Direct Evidence: marker/mechanism CTD PMID:18492274 NCBI chrNW_004936668:660,415...709,282 JBrowse link
G Tert telomerase reverse transcriptase treatment ISO RGD PMID:19903903 RGD:11038656 NCBI chrNW_004936815:468,987...492,666 JBrowse link
Experimental Sarcoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agps alkylglycerone phosphate synthase ISO RGD PMID:7407223 RGD:1598794 NCBI chrNW_004936509:6,742,800...6,872,045 JBrowse link
G Epo erythropoietin ISO CTD Direct Evidence: therapeutic CTD PMID:9743294 NCBI chrNW_004936543:742,722...745,332 JBrowse link
G Ifng interferon gamma treatment ISO RGD PMID:2119881 RGD:10755752 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO A to T transversion; Gln to His substitution RGD PMID:11295286 RGD:1598680 NCBI chrNW_004936548:2,078,568...2,113,877 JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO DNA:transversion:exon p.Q61L (human) RGD PMID:11295286 RGD:1598680 NCBI chrNW_004936627:73,413...82,590 JBrowse link
G Slc6a14 solute carrier family 6 member 14 ISO mRNA, protein:increased expression:brush border epithelial cell RGD PMID:17006743 RGD:1625275 NCBI chrNW_004936479:13,024,831...13,051,908 JBrowse link
Mammary Neoplasms, Experimental term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:19654309 RGD:2315553 NCBI chrNW_004936763:1,225,355...1,308,257 JBrowse link
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936554:4,425,518...4,484,853 JBrowse link
G Actb actin beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936765:667,107...670,627 JBrowse link
G Actg1 actin gamma 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936594:5,170,711...5,173,251 JBrowse link
G Actn4 actinin alpha 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936801:1,333,077...1,402,885 JBrowse link
G Adcy5 adenylate cyclase 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing treatment
disease_progression
ISO RGD PMID:19447866 PMID:22246620 RGD:8694414 RGD:8694468 NCBI chrNW_004936578:3,168,599...3,179,369 JBrowse link
G Agt angiotensinogen treatment ISO RGD PMID:20837666 RGD:5129167 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:18421211 RGD:2292665 NCBI chrNW_004936519:6,831,096...6,873,977 JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:8389152 NCBI chrNW_004936479:13,252,678...13,255,570 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:17210696 RGD:2315600 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:17210696 RGD:2315600 NCBI chrNW_004936661:2,652,568...2,694,039 JBrowse link
G Alcam activated leukocyte cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:16316942 RGD:2306898 NCBI chrNW_004936701:895,414...1,084,155 JBrowse link
G Antxr1 ANTXR cell adhesion molecule 1 disease_progression ISO RGD PMID:22085271 RGD:9684855 NCBI chrNW_004936491:13,288,986...13,516,878 JBrowse link
G Anxa1 annexin A1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:12376462 PMID:16316942 RGD:2306898 NCBI chrNW_004936503:9,124,314...9,142,372 JBrowse link
G Anxa4 annexin A4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936491:13,982,926...14,047,690 JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:14973070 RGD:2325748 NCBI chrNW_004936492:14,818,561...14,902,231 JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:22469977 RGD:7771597 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Ar androgen receptor ISO RGD PMID:12150826 RGD:6482679 NCBI chrNW_004936635:485,903...647,820 JBrowse link
G Areg amphiregulin ISO protein:increased expression:mammary gland
mRNA:increased expression:mammary gland
RGD PMID:10225449 PMID:18421211 RGD:2292663 RGD:2292665 NCBI chrNW_004936598:1,276,599...1,283,612 JBrowse link
G Arhgap5 Rho GTPase activating protein 5 disease_progression ISO mRNA:increased expression:mammary gland RGD PMID:10939588 PMID:19703301 RGD:126848766 RGD:2316183 NCBI chrNW_004936494:6,562,092...6,624,015 JBrowse link
G Atp5if1 ATP synthase inhibitory factor subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936474:12,396,416...12,399,760 JBrowse link
G Aurka aurora kinase A ISO CTD Direct Evidence: marker/mechanism CTD PMID:12124350 NCBI chrNW_004936875:295,238...310,457 JBrowse link
G Bad BCL2 associated agonist of cell death treatment
severity
ISO RGD PMID:20732338 PMID:23404339 RGD:10053670 RGD:10053708 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
G Bak1 BCL2 antagonist/killer 1 ISO RGD PMID:19222350 RGD:2315700 NCBI chrNW_004936476:25,347,608...25,354,772 JBrowse link
G Bard1 BRCA1 associated RING domain 1 ISO RGD PMID:18443292 RGD:2293149 NCBI chrNW_004936586:2,200,211...2,272,781 JBrowse link
G Basp1 brain abundant membrane attached signal protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936480:19,695,949...19,812,681 JBrowse link
G Bax BCL2 associated X, apoptosis regulator severity
treatment
ISO RGD PMID:20732338 PMID:23404339 RGD:10053670 RGD:10053708 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Bcl2 BCL2 apoptosis regulator treatment ISO RGD PMID:22668016 PMID:23404339 RGD:10053670 RGD:10054128 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Bcl2l1 BCL2 like 1 treatment ISO RGD PMID:23404339 RGD:10053670 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Brca1 BRCA1 DNA repair associated susceptibility ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:12203372 PMID:17505536 PMID:18443292 PMID:22767648 RGD:1599502 RGD:2293149 RGD:2293155 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Ca9 carbonic anhydrase 9 ISO RGD PMID:17280655 RGD:2293194 NCBI chrNW_004936524:3,672,393...3,678,630 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase disease_progression ISO protein:increased expression:mammary gland RGD PMID:6030068 RGD:2303540 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936474:5,594,193...5,656,665 JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936502:7,933,312...8,281,492 JBrowse link
G Casp3 caspase 3 treatment
severity
ISO RGD PMID:20732338 PMID:23404339 PMID:26699876 RGD:10053670 RGD:10053708 RGD:13782283 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp7 caspase 7 treatment ISO RGD PMID:23404339 PMID:23979166 PMID:26699876 RGD:10053670 RGD:13209143 RGD:13782283 NCBI chrNW_004936486:4,082,664...4,114,942 JBrowse link
G Casp8 caspase 8 severity ISO RGD PMID:20732338 RGD:10053708 NCBI chrNW_004936726:554,627...596,334 JBrowse link
G Casp9 caspase 9 treatment
severity
ISO RGD PMID:17297389 PMID:20012353 PMID:20732338 PMID:26699876 RGD:10053708 RGD:13782283 RGD:2315928 RGD:2315933 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cav1 caveolin 1 treatment
onset
ISO protein:decreased expression:mammary gland RGD PMID:9685399 PMID:15334058 PMID:15355971 RGD:2289100 RGD:2289106 RGD:8661780 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Ccdc194 coiled-coil domain containing 194 disease_progression ISO RGD PMID:23806386 RGD:14398495 NCBI chrNW_004936596:3,492,733...3,501,347 JBrowse link
G Ccna2 cyclin A2 ISO protein:increased expression:mammary gland RGD PMID:10713672 RGD:2293347 NCBI chrNW_004936662:1,073,460...1,079,136 JBrowse link
G Ccnb1 cyclin B1 ISO RGD PMID:11146550 RGD:2315939 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Ccnd1 cyclin D1 ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:mammary gland (rat)
mRNA:increased expression:mammary gland (rat)
protein:decreased expression:mammary gland
CTD
RGD
PMID:12376462 PMID:12602925 PMID:12649181 PMID:14522882 PMID:16316942 More... RGD:2289336 RGD:2289337 RGD:2292404 RGD:2296037 RGD:2306898
G Ccnd3 cyclin D3 ISO mRNA, protein:increased expression:mammary gland RGD PMID:12853979 PMID:16311245 RGD:2316015 RGD:2316020 NCBI chrNW_004936476:17,799,754...17,886,835 JBrowse link
G Ccne1 cyclin E1 ISO protein:decreased expression:mammary gland RGD PMID:12602925 PMID:12649181 RGD:2289336 RGD:2289337 NCBI chrNW_004936570:5,536,817...5,547,880 JBrowse link
G Ccnh cyclin H ISO mRNA:increased expression:mammary gland
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:12606953 RGD:9590264 NCBI chrNW_004936469:5,933,163...5,952,190 JBrowse link
G Ccr3 C-C motif chemokine receptor 3 ISO RGD PMID:21621198 RGD:6893427 NCBI chrNW_004936596:223,660...224,739 JBrowse link
G Cd274 CD274 molecule treatment ISO RGD PMID:29043842 RGD:40886270 NCBI chrNW_004936539:132,870...145,288 JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:21137078 RGD:8547744 NCBI chrNW_004936514:6,936,915...6,947,246 JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISO CTD Direct Evidence: marker/mechanism CTD PMID:21283680 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cdc25a cell division cycle 25A ISO RGD PMID:16951165 PMID:17283130 PMID:17638870 RGD:2754551 RGD:2764000 RGD:2771824 NCBI chrNW_004936596:1,657,411...1,680,109 JBrowse link
G Cdc42 cell division cycle 42 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cdh1 cadherin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936475:18,990,529...19,065,954 JBrowse link
G Cdh13 cadherin 13 severity ISO RGD PMID:18316604 RGD:2293540 NCBI chrNW_004936641:3,925,185...4,223,421 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:16924466 RGD:2293558 NCBI chrNW_004936646:379,849...385,648 JBrowse link
G Cdk4 cyclin dependent kinase 4 susceptibility ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:mammary gland
RGD
CTD
PMID:12376462 PMID:14522882 PMID:16413469 PMID:25221644 RGD:2293577 RGD:2293581 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cdk6 cyclin dependent kinase 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25221644 NCBI chrNW_004936803:1,025,047...1,229,396 JBrowse link
G Cdkl2 cyclin dependent kinase like 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25333262 NCBI chrNW_004936598:337,701...377,091 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B treatment ISO protein:increased expression:mammary gland RGD PMID:15844214 PMID:22651929 RGD:10045559 RGD:2293626 NCBI chrNW_004936587:4,573,166...4,578,480 JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936738:160,346...227,687 JBrowse link
G Clu clusterin disease_progression ISO RGD PMID:23099883 RGD:8699504 NCBI chrNW_004936675:499,745...513,515 JBrowse link
G Cnn3 calponin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936537:4,308,951...4,337,990 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain severity ISO RGD PMID:10766159 RGD:70690 NCBI chrNW_004936778:847,473...943,038 JBrowse link
G Col5a1 collagen type V alpha 1 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936669:2,474,381...2,613,541 JBrowse link
G Csf1 colony stimulating factor 1 ISO RGD PMID:15205327 RGD:2293710 NCBI chrNW_004936704:1,372,137...1,393,355 JBrowse link
G Csn3 casein kappa ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:16316942 RGD:2306898 NCBI chrNW_004936598:4,404,810...4,408,556 JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO RGD PMID:11827167 RGD:727632 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Ctnnb1 catenin beta 1 ISO protein:increased expression:mammary gland
DNA:missense mutations: :p.S33Y, p.S45F
RGD PMID:17510243 PMID:18060046 RGD:2289674 RGD:2289816 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936469:50,981,198...50,986,224 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD
RGD
PMID:21283680 PMID:29298894 RGD:151347446 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Des desmin ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936569:1,807,902...1,814,936 JBrowse link
G Dio1 iodothyronine deiodinase 1 ISO RGD PMID:11765219 RGD:727335 NCBI chrNW_004936522:7,234,270...7,250,263 JBrowse link
G Dnmt3b DNA methyltransferase 3 beta treatment ISO RGD PMID:24447120 RGD:9588304 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Dusp1 dual specificity phosphatase 1 treatment ISO RGD PMID:20837666 RGD:5129167 NCBI chrNW_004936609:2,688,170...2,691,057 JBrowse link
G Dusp6 dual specificity phosphatase 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936507:6,309,114...6,314,512 JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936859:740,620...744,534 JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936491:2,159,654...2,214,480 JBrowse link
G Egfr epidermal growth factor receptor ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:2523869 PMID:8603490 PMID:17203220 RGD:2289979 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Eif5a eukaryotic translation initiation factor 5A ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936595:604,268...609,075 JBrowse link
G Eno1 enolase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Epcam epithelial cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936508:5,019,513...5,032,610 JBrowse link
G Ephx1 epoxide hydrolase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936526:2,589,254...2,652,831 JBrowse link
G Epo erythropoietin treatment ISO RGD PMID:12118093 RGD:11041669 NCBI chrNW_004936543:742,722...745,332 JBrowse link
G Epor erythropoietin receptor treatment ISO RGD PMID:12118093 RGD:11041669 NCBI chrNW_004936659:1,468,391...1,473,880 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism
Androgen-dependent
RGD
CTD
PMID:1913683 PMID:8603490 PMID:12150826 PMID:17203220 PMID:25221644 RGD:2289920 RGD:2289979 RGD:6482679 NCBI chrNW_004936490:14,887,062...14,910,038 JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:17203220 RGD:2289979 NCBI chrNW_004936646:497,783...515,247 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:17203220 RGD:2289979 NCBI chrNW_004936586:4,065,767...5,100,690 JBrowse link
G Esr1 estrogen receptor 1 susceptibility ISO protein:increased expression:epithelial cell, nucleus
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:11759285 PMID:15637090 PMID:18055862 RGD:2290019 RGD:8552983 RGD:8553057 NCBI chrNW_004936489:4,616,839...4,887,179 JBrowse link
G Esr2 estrogen receptor 2 treatment ISO protein:increased expression:epithelial cell, nucleus
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:15637090 PMID:24078029 RGD:7364911 RGD:8552983 NCBI chrNW_004936495:7,956,168...8,018,356 JBrowse link
G Ezr ezrin ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936489:10,413,374...10,457,771 JBrowse link
G F11r F11 receptor ISO RGD PMID:22120722 RGD:7488922 NCBI chrNW_004936903:317,975...338,892 JBrowse link
G Fabp4 fatty acid binding protein 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936656:2,722,970...2,727,383 JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:18094967 RGD:2290047 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Fbxo10 F-box protein 10 ISO RGD PMID:17404222 RGD:1601189 NCBI chrNW_004936524:5,285,844...5,355,212 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO mRNA:increased expression:mammary gland RGD PMID:18421211 RGD:2292665 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Fgf7 fibroblast growth factor 7 ISO RGD PMID:9000125 RGD:2301094 NCBI chrNW_004936471:11,636,733...11,692,782 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO RGD PMID:9840935 RGD:2301098 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 ISO RGD PMID:10498246 RGD:2302211 NCBI chrNW_004936472:23,169,967...23,239,178 JBrowse link
G Fn1 fibronectin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Frmpd1 FERM and PDZ domain containing 1 ISO RGD PMID:17404222 RGD:1601189 NCBI chrNW_004936524:5,469,495...5,557,109 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936483:16,136,099...16,147,945 JBrowse link
G G0s2 G0/G1 switch 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936557:3,428,157...3,429,176 JBrowse link
G Gata3 GATA binding protein 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gatm glycine amidinotransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936471:8,017,611...8,032,703 JBrowse link
G Gda guanine deaminase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936503:8,191,925...8,279,806 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Gnai2 G protein subunit alpha i2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936529:1,779,582...1,801,251 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta treatment ISO RGD PMID:28810530 RGD:13792729 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Gsn gelsolin ISO mRNA:decreased expression RGD PMID:8895730 RGD:1599869 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Gss glutathione synthetase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936561:5,765,637...5,793,951 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha treatment ISO RGD PMID:17280655 RGD:2293194 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Hmox1 heme oxygenase 1 treatment ISO CTD Direct Evidence: therapeutic CTD
RGD
PMID:16319139 PMID:23215791 RGD:10755708 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15538050 NCBI chrNW_004936647:478,445...520,361 JBrowse link
G Hras HRas proto-oncogene, GTPase ISO CTD Direct Evidence: marker/mechanism
DNA:mutation: :p.G12E (rat)
CTD
RGD
PMID:8185828 PMID:11376698 PMID:19652463 RGD:2314834 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:21283680 NCBI chrNW_004936485:18,610,721...18,611,889 JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936474:8,758,098...8,759,684 JBrowse link
G Igf1 insulin like growth factor 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:15217511 PMID:15528971 PMID:17584969 PMID:23342276 RGD:8549490 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Il10 interleukin 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14999141 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Il1rn interleukin 1 receptor antagonist treatment ISO human protein in a mouse model RGD PMID:21890879 RGD:6771361 NCBI chrNW_004936783:1,447,158...1,466,331 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer ISO CTD Direct Evidence: marker/mechanism CTD PMID:12606953 NCBI chrNW_004936480:11,867,573...11,913,563 JBrowse link
G Ilk integrin linked kinase ISO late onset development of tumors in transgenic mice overexpressing human ILK in mammary glands RGD PMID:11704830 RGD:2301733 NCBI chrNW_004936842:661,961...667,993 JBrowse link
G Insig1 insulin induced gene 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936527:9,684,304...9,696,951 JBrowse link
G Itgb3 integrin subunit beta 3 ISO protein:increased expression:mammary gland: RGD PMID:22022542 RGD:8693386 NCBI chrNW_004936541:2,822,789...2,871,069 JBrowse link
G Kdr kinase insert domain receptor ISO inhibition prevents DMBA-induced atypical ductal hyperplasia and carcinoma in situ RGD PMID:15170218 PMID:19888452 RGD:2291936 RGD:5684399 NCBI chrNW_004936482:17,537,697...17,581,320 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO DNA:mutation (rat) RGD PMID:18445266 RGD:2302172 NCBI chrNW_004936482:17,162,854...17,238,319 JBrowse link
G Kitlg KIT ligand ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936507:5,566,144...5,650,412 JBrowse link
G Krt5 keratin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936512:9,923,593...9,929,517 JBrowse link
G Krt7 keratin 7 ISO RGD PMID:8570173 RGD:2317439 NCBI chrNW_004936512:9,641,587...9,656,573 JBrowse link
G Lgals7 galectin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936801:1,426,920...1,428,976 JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO mRNA:splice variant (rat) RGD PMID:15044717 RGD:2302177 NCBI chrNW_004936508:3,928,467...3,983,481 JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936698:1,675,329...1,810,845 JBrowse link
G LOC101959548 beta-casein ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:9879772 PMID:16316942 RGD:2306898 NCBI chrNW_004936598:4,683,300...4,687,605 JBrowse link
G LOC101963257 histone H3.3A ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936594:959,493...961,703 JBrowse link
G LOC101963472 arachidonate 5-lipoxygenase activating protein ISO mRNA:increased expression:mammary gland tumor (rat) RGD PMID:18959458 RGD:2313895 NCBI chrNW_004936472:25,477,094...25,502,823 JBrowse link
G LOC101964375 interleukin 18 binding protein ISO mRNA:increased expression:mammary gland RGD PMID:18959458 RGD:2313895 NCBI chrNW_004936498:1,353,569...1,358,312 JBrowse link
G LOC101966155 alpha fetoprotein ISO CTD Direct Evidence: therapeutic CTD PMID:16322315 NCBI chrNW_004936598:2,058,474...2,077,711 JBrowse link
G LOC101966907 histone H2AX treatment ISO RGD PMID:22384017 RGD:7240549 NCBI chrNW_004936542:4,046,930...4,049,017 JBrowse link
G LOC101967654 thyroid hormone responsive ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936498:6,622,007...6,624,961 JBrowse link
G LOC101968824 leucyl and cystinyl aminopeptidase ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:serum
CTD
RGD
PMID:16619500 RGD:1582109 NCBI chrNW_004936523:6,443,571...6,533,122 JBrowse link
G LOC101968976 leptin treatment ISO RGD PMID:22246620 RGD:8694468 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G LOC101969021 somatotropin treatment ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:6139974 PMID:12082019 PMID:15528971 PMID:17584969 RGD:11352806 RGD:2315650 NCBI chrNW_004936541:4,524,397...4,528,234 JBrowse link
G LOC101970831 serotransferrin ISO CTD Direct Evidence: marker/mechanism CTD PMID:9879772 PMID:16316942 NCBI chrNW_004936529:6,917,762...6,947,512 JBrowse link
G LOC101971922 arginyl aminopeptidase ISO protein:increased expression:serum
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:16619500 RGD:1582109 NCBI chrNW_004936567:2,504,544...2,524,977 JBrowse link
G LOC101974254 X-linked inhibitor of apoptosis ISO CTD Direct Evidence: therapeutic CTD PMID:12766084 NCBI chrNW_004936479:6,677,533...6,724,800 JBrowse link
G LOC101976134 thioredoxin interacting protein severity ISO mRNA:decreased expression:mammary gland RGD PMID:15170812 RGD:1642758 NCBI chrNW_004936867:722,544...726,595 JBrowse link
G LOC101976500 haptoglobin treatment ISO RGD PMID:23880232 RGD:11041861 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G LOC101976563 matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936587:2,601,419...2,605,848 JBrowse link
G Lpl lipoprotein lipase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936555:4,084,099...4,108,219 JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936570:1,023,967...1,038,223 JBrowse link
G Map2k3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:24233520 RGD:7495808 NCBI chrNW_004936741:362,682...386,633 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21317887 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:29435821 RGD:13800872 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 treatment ISO RGD PMID:29435821 RGD:13800872 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mdh2 malate dehydrogenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936543:2,194,074...2,208,626 JBrowse link
G Mif macrophage migration inhibitory factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
G Mmp1 matrix metallopeptidase 1 treatment ISO RGD PMID:19622769 RGD:8549722 NCBI chrNW_004936551:5,167,909...5,175,149 JBrowse link
G Mmp13 matrix metallopeptidase 13 severity ISO RGD PMID:18698413 RGD:2306081 NCBI chrNW_004936551:5,040,084...5,050,384 JBrowse link
G Mmp15 matrix metallopeptidase 15 ISO mRNA:increased expression:mammary gland RGD PMID:15895410 RGD:2314949 NCBI chrNW_004936475:9,951,876...9,971,631 JBrowse link
G Mmp2 matrix metallopeptidase 2 treatment ISO protein:increased expression:mammary gland
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:19725228 PMID:23359979 PMID:28574600 RGD:2325823 RGD:8657038 NCBI chrNW_004936475:7,801,356...7,825,831 JBrowse link
G Mmp7 matrix metallopeptidase 7 onset ISO RGD PMID:9850086 RGD:9685350 NCBI chrNW_004936551:5,388,456...5,395,071 JBrowse link
G Mmp9 matrix metallopeptidase 9 treatment ISO mRNA, protein:increased expression:mammary gland
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:19725228 PMID:21283680 PMID:23359979 RGD:2325823 RGD:8657038 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mpzl1 myelin protein zero like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936481:18,340,269...18,358,729 JBrowse link
G Mrc2 mannose receptor C type 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936541:3,461,985...3,487,536 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:22349822 RGD:10040957 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Muc1 mucin 1, cell surface associated treatment ISO RGD PMID:23015160 RGD:7349374 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor treatment ISO RGD PMID:22384017 RGD:7240549 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21080969 NCBI chrNW_004936493:7,368,393...7,605,754 JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 treatment ISO RGD PMID:22072621 RGD:10412719 NCBI chrNW_004936509:6,589,967...6,621,171 JBrowse link
G Notch4 notch receptor 4 ISO RGD PMID:15531924 RGD:2299154 NCBI chrNW_004936727:1,386,842...1,409,823 JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936669:606,392...614,748 JBrowse link
G Nudt1 nudix hydrolase 1 ISO mRNA:increased expression:mammary gland RGD PMID:12036445 RGD:724605 NCBI chrNW_004936823:7,104...22,083 JBrowse link
G Padi4 peptidyl arginine deiminase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936474:4,219,183...4,239,551 JBrowse link
G Pak4 p21 (RAC1) activated kinase 4 ISO RGD PMID:20697354 RGD:7775027 NCBI chrNW_004936661:2,012,439...2,048,523 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 treatment ISO RGD PMID:23404339 RGD:10053670 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pcna proliferating cell nuclear antigen ISO mRNA,protein:increased expression:mammary gland: RGD PMID:2567593 RGD:10448972 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pcp4 Purkinje cell protein 4 ISO mRNA,protein:increased expression:cytoplasm: RGD PMID:19480007 RGD:9850273 NCBI chrNW_004936500:3,416,840...3,468,893 JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:mammary gland (rat)
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:12376462 PMID:16316942 RGD:2292404 RGD:2306898 NCBI chrNW_004936754:808,894...828,554 JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936668:2,316,661...2,323,015 JBrowse link
G Pgam1 phosphoglycerate mutase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936636:2,240,452...2,248,689 JBrowse link
G Pgr progesterone receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:15637090 NCBI chrNW_004936551:6,498,553...6,573,212 JBrowse link
G Phb1 prohibitin 1 ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:mammary gland
CTD
RGD
PMID:12376462 RGD:2292404 NCBI chrNW_004936490:12,127,065...12,138,870 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12606953 NCBI chrNW_004936480:1,188,408...1,273,210 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:22064478 RGD:8693420 NCBI chrNW_004936659:309,530...321,294 JBrowse link
G Pkm pyruvate kinase M1/2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Plau plasminogen activator, urokinase disease_progression ISO RGD PMID:18052026 RGD:6484140 NCBI chrNW_004936521:5,238,128...5,243,829 JBrowse link
G Plk2 polo like kinase 2 ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:mammary gland (rat)
CTD
RGD
PMID:12376462 RGD:2292404 NCBI chrNW_004936480:9,680,461...9,686,593 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:11137312 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Prdx2 peroxiredoxin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G Prl prolactin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Prlr prolactin receptor ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:16316942 RGD:2306898 NCBI chrNW_004936518:6,352,133...6,495,242 JBrowse link
G Psma4 proteasome 20S subunit alpha 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936471:36,508,045...36,516,033 JBrowse link
G Psme1 proteasome activator subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936722:405,491...408,277 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936588:316,348...326,895 JBrowse link
G Pten phosphatase and tensin homolog onset ISO RGD PMID:18381417 RGD:2292496 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Ptger1 prostaglandin E receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:11751431 NCBI chrNW_004936659:3,014,633...3,018,617 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO mRNA:increased expression:breast RGD PMID:18279516 PMID:18676768 PMID:21623034 RGD:2300118 RGD:2300130 RGD:5135030 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptk2 protein tyrosine kinase 2 disease_progression ISO CTD Direct Evidence: therapeutic RGD
CTD
PMID:15930288 PMID:18056629 PMID:24809783 RGD:2292554 RGD:2292560 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
G Ptn pleiotrophin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936592:1,706,979...1,806,345 JBrowse link
G Ptprb protein tyrosine phosphatase receptor type B treatment ISO RGD PMID:23899555 RGD:151660352 NCBI chrNW_004936545:8,150,766...8,235,674 JBrowse link
G Ran RAN, member RAS oncogene family ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936660:1,669,352...1,673,972 JBrowse link
G Rasa1 RAS p21 protein activator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12606953 NCBI chrNW_004936469:5,839,560...5,933,049 JBrowse link
G Rasgrf2 Ras protein specific guanine nucleotide releasing factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12606953 NCBI chrNW_004936469:337,340...573,763 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:14522882 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Rbp1 retinol binding protein 1 ISO CTD Direct Evidence: marker/mechanism
mRNA, protein:increased expression:mammary gland (rat)
CTD
RGD
PMID:12376462 RGD:2292404 NCBI chrNW_004936540:1,600,673...1,626,573 JBrowse link
G Rbp4 retinol binding protein 4 ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:16316942 RGD:2306898 NCBI chrNW_004936601:1,401,215...1,410,195 JBrowse link
G Rcn1 reticulocalbin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936533:5,685,053...5,693,518 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO protein:decreased expression:peritoneal macrophage RGD PMID:16288051 RGD:2298764 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit ISO RGD PMID:16260626 RGD:7777148 NCBI chrNW_004936706:1,569,603...1,596,831 JBrowse link
G Rpl3 ribosomal protein L3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936492:2,299,067...2,305,139 JBrowse link
G Rpl6 ribosomal protein L6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936668:2,584,829...2,588,236 JBrowse link
G Rps14 ribosomal protein S14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936504:4,495,930...4,500,843 JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16344269 RGD:1643109 NCBI chrNW_004936669:2,735,111...2,763,060 JBrowse link
G S100a6 S100 calcium binding protein A6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936580:3,347,185...3,347,878 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936748:1,244,962...1,250,093 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936558:530,828...555,098 JBrowse link
G Selenop selenoprotein P ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936518:155,905...166,932 JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936560:1,979,804...2,009,167 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
G Slc25a10 solute carrier family 25 member 10 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936594:5,308,623...5,314,955 JBrowse link
G Sncg synuclein gamma ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936804:16,869...21,684 JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936619:728,759...744,367 JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO mRNA:increased expression:mammary gland RGD PMID:18381452 PMID:20354188 RGD:21079418 RGD:2298899 NCBI chrNW_004936530:9,312,965...9,315,593 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO mRNA:increased expression:mammary gland RGD PMID:18381452 RGD:2298899 NCBI chrNW_004936594:2,932,297...2,935,358 JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23964924 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936801:1,041,946...1,069,617 JBrowse link
G Spp1 secreted phosphoprotein 1 ISO CTD Direct Evidence: therapeutic CTD PMID:15318939 NCBI chrNW_004936905:148,956...156,023 JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936594:1,775,412...1,778,389 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO RGD PMID:11325527 RGD:2291895 NCBI chrNW_004936506:7,196,860...7,235,854 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO CTD Direct Evidence: marker/mechanism
mRNA:increased expression:mammary gland (rat)
CTD
RGD
PMID:16316942 PMID:17483332 RGD:2291914 RGD:2306898 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Stat6 signal transducer and activator of transcription 6 ISO DNA:gene knockout::Balb/C-derived Stat6(-/-) mice resistant to growth of implanted Balb/C mammary tumors RGD PMID:11086031 RGD:2298563 NCBI chrNW_004936646:1,297,530...1,312,508 JBrowse link
G Stc2 stanniocalcin 2 ISO mRNA:increased expression:mammary gland RGD PMID:18959458 RGD:2313895 NCBI chrNW_004936609:2,319,546...2,331,049 JBrowse link
G Stmn1 stathmin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
G Tdg thymine DNA glycosylase ISO mRNA:increased expression:mammary gland tumor (mouse) RGD PMID:9794235 RGD:2317355 NCBI chrNW_004936492:10,476,472...10,506,144 JBrowse link
G Tgfa transforming growth factor alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:8603490 NCBI chrNW_004936491:14,659,089...14,758,614 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:8466857 RGD:7394797 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO RGD PMID:12808151 RGD:737735 NCBI chrNW_004936524:7,656,523...7,680,043 JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:12808151 RGD:737735 NCBI chrNW_004936473:21,324,669...21,409,430 JBrowse link
G Thbs1 thrombospondin 1 ISO mRNA:increased expression:mammary gland RGD PMID:15459484 RGD:1626167 NCBI chrNW_004936471:3,064,466...3,081,125 JBrowse link
G Tkt transketolase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936473:3,950,846...3,978,778 JBrowse link
G Tle4 TLE family member 4, transcriptional corepressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936632:3,077,594...3,213,763 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:19755514 RGD:7401185 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:21252285 NCBI chrNW_004936593:212,642...230,645 JBrowse link
G Tp53 tumor protein p53 disease_progression ISO CTD Direct Evidence: marker/mechanism RGD
CTD
PMID:17470299 PMID:18092324 PMID:24809783 RGD:2290539 RGD:2290577 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Tpm3 tropomyosin 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 PMID:16316942 NCBI chrNW_004936580:3,860,185...3,893,251 JBrowse link
G Trps1 transcriptional repressor GATA binding 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936470:30,475,779...30,666,546 JBrowse link
G Tsc22d1 TSC22 domain family member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936791:697,244...811,463 JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:9635926 RGD:2315839 NCBI chrNW_004936550:33,797...42,233 JBrowse link
G Ube2i ubiquitin conjugating enzyme E2 I ISO MCF-7 human breast cancer cell tumors grown in nude mice
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:15735760 PMID:16316942 RGD:2301345 NCBI chrNW_004936694:2,561,701...2,571,284 JBrowse link
G Ucp2 uncoupling protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936498:3,059,700...3,066,112 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16316942 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:15333467 RGD:8158073 NCBI chrNW_004936512:5,741,836...5,800,999 JBrowse link
G Vegfa vascular endothelial growth factor A treatment ISO human protein in a mouse model RGD PMID:21890879 RGD:6771361 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
G Wnt1 Wnt family member 1 ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936512:6,781,001...6,785,358 JBrowse link
G Wnt2 Wnt family member 2 ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936589:1,825,209...1,866,898 JBrowse link
G Wnt3 Wnt family member 3 ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:9419423 RGD:2298848 NCBI chrNW_004936541:1,943,260...1,985,829 JBrowse link
G Wnt3a Wnt family member 3A ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5b Wnt family member 5B no_association ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936606:1,741,500...1,854,857 JBrowse link
G Wnt6 Wnt family member 6 no_association ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936569:1,290,061...1,302,672 JBrowse link
G Wnt7a Wnt family member 7A ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936898:45,903...70,313 JBrowse link
G Wnt7b Wnt family member 7B no_association ISO in vitro transformation of transfected C57MG mammary epithelial cell line RGD PMID:8065359 PMID:9419423 RGD:2298848 RGD:2298863 NCBI chrNW_004936629:3,869,976...3,907,932 JBrowse link
G Xdh xanthine dehydrogenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21283680 NCBI chrNW_004936621:1,462,441...1,474,937 JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta ISO CTD Direct Evidence: marker/mechanism CTD PMID:12376462 NCBI chrNW_004936470:42,444,671...42,470,548 JBrowse link
Sarcoma, Yoshida term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase treatment ISO RGD PMID:8138551 RGD:11251753 NCBI chrNW_004936537:1,660,461...2,439,305 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 13707
    disease of cellular proliferation 6467
      Experimental Neoplasms 412
        Carcinoma 256, Walker 0
        Carcinoma, Brown-Pearce 0
        Carcinoma, Krebs 2 0
        Carcinoma, Lewis Lung 11
        Ehrlich tumor carcinoma 3
        Experimental Leukemia + 7
        Experimental Liver Neoplasms 107
        Experimental Melanoma 23
        Experimental Sarcoma + 8
        Mammary Neoplasms, Experimental 267
Path 2
Term Annotations click to browse term
  disease 13707
    Animal Diseases 1188
      Animal Disease Models 1151
        Experimental Neoplasms 412
          Carcinoma 256, Walker 0
          Carcinoma, Brown-Pearce 0
          Carcinoma, Krebs 2 0
          Carcinoma, Lewis Lung 11
          Ehrlich tumor carcinoma 3
          Experimental Leukemia + 7
          Experimental Liver Neoplasms 107
          Experimental Melanoma 23
          Experimental Sarcoma + 8
          Mammary Neoplasms, Experimental 267
paths to the root