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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Peritoneal Neoplasms
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Accession:DOID:9001834 term browser browse the term
Definition:Tumors or cancer of the PERITONEUM.
Synonyms:exact_synonym: peritoneal neoplasm
 primary_id: MESH:D010534
 alt_id: RDO:0006115
 xref: EFO:1001100


show annotations for term's descendants           Sort by:
Peritoneal Neoplasms term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB2 calbindin 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr16:71,358,723...71,390,433
Ensembl chr16:71,358,713...71,390,436 		JBrowse link
G CTNNB1 catenin beta 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 EXP CTD Direct Evidence: marker/mechanism CTD PMID:23621518 NCBI chr 7:23,310,209...23,470,491
Ensembl chr 7:23,310,209...23,470,491 		JBrowse link
G MCAM melanoma cell adhesion molecule EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 PMID:23621518 NCBI chr11:119,308,529...119,317,130
Ensembl chr11:119,308,529...119,321,521 		JBrowse link
G MLANA melan-A EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr 9:5,890,889...5,910,606
Ensembl chr 9:5,890,889...5,910,606 		JBrowse link
G MUC1 mucin 1, cell surface associated EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916 		JBrowse link
G PDPN podoplanin EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr 1:13,583,757...13,617,957
Ensembl chr 1:13,583,465...13,617,957 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr 1:42,925,353...42,958,868
Ensembl chr 1:42,925,353...42,958,893 		JBrowse link
G VIM vimentin EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
G WT1 WT1 transcription factor EXP CTD Direct Evidence: marker/mechanism CTD PMID:22784439 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 		JBrowse link
peritoneal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLH1 mutL homolog 1 IAGP ClinVar Annotator: match by term: Primary peritoneal carcinoma ClinVar PMID:25741868 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
peritoneal mesothelioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LATS1 large tumor suppressor kinase 1 IAGP ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr 6:149,658,153...149,718,101
Ensembl chr 6:149,658,153...149,718,105 		JBrowse link
G LATS2 large tumor suppressor kinase 2 IAGP ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr13:20,973,036...21,061,586
Ensembl chr13:20,973,036...21,061,586 		JBrowse link
G MECOM MDS1 and EVI1 complex locus IAGP ClinVar Annotator: match by term: Malignant peritoneal mesothelioma ClinVar NCBI chr 3:169,083,507...169,663,712
Ensembl chr 3:169,083,499...169,663,775 		JBrowse link
G TRAF7 TNF receptor associated factor 7 IAGP DNA:missense mutations:multiple RGD PMID:30171198 RGD:151356964 NCBI chr16:2,155,782...2,178,129
Ensembl chr16:2,155,698...2,178,129 		JBrowse link
peritoneum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA1 BRCA1 DNA repair associated IAGP ClinVar Annotator: match by term: Peritoneum cancer ClinVar PMID:20104584 PMID:25741868 PMID:26467025 PMID:28492532 PMID:29446198 More... NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta severity ISO associated with stomach cancer RGD PMID:26514342 RGD:11556383 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668 		JBrowse link
G GP1BA glycoprotein Ib platelet subunit alpha sexual_dimorphism IEP associated with stomach cancer;protein:altered expression:peritoneum (human) RGD PMID:32724431 RGD:42722625 NCBI chr17:4,932,277...4,935,023
Ensembl chr17:4,932,277...4,935,023 		JBrowse link
G LOC126862571 BRD4-independent group 4 enhancer GRCh37_chr17:41243136-41244335 IAGP ClinVar Annotator: match by term: Peritoneum cancer ClinVar PMID:20104584 PMID:25741868 PMID:26467025 PMID:28492532 PMID:29446198 More... NCBI chr17:43,091,119...43,092,318 JBrowse link
G PRG2 proteoglycan 2, pro eosinophil major basic protein severity IEP associated with colorectal cancer;protein:decreased expression:colorectum, eosinophil (human) RGD PMID:28439450 RGD:40902993 NCBI chr11:57,386,780...57,390,650
Ensembl chr11:57,386,780...57,390,650 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 41189
    disease of cellular proliferation 9736
      Neoplasms by Site 8912
        Abdominal Neoplasms 23
          Peritoneal Neoplasms 20
            Mesenteric Cyst 0
            peritoneum cancer + 10
paths to the root