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ONTOLOGY REPORT - ANNOTATIONS


Term:Experimental Liver Neoplasms
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Accession:DOID:9001586 term browser browse the term
Definition:Experimentally induced tumors of the LIVER.
Synonyms:exact_synonym: Experimental Hepatomas;   Experimental Liver Neoplasm;   Morris Hepatoma;   Novikoff hepatoma;   experimental hepatoma
 primary_id: MESH:D008114
 alt_id: RDO:0006023
For additional species annotation, visit the Alliance of Genome Resources.


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Experimental Liver Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:1598580
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:5684351
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1598766
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:11554173
G Agps alkylglycerone phosphate synthase JBrowse link 3 62,648,352 62,749,250 RGD:1598794
G Alas2 5'-aminolevulinate synthase 2 JBrowse link X 23,167,576 23,187,356 RGD:11554173
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:11554173
G Apoc2 apolipoprotein C2 JBrowse link 1 80,589,023 80,593,991 RGD:11554173
G Arrb2 arrestin, beta 2 JBrowse link 10 57,040,252 57,048,045 RGD:5509890
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:11554173
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:11554173
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:11554173
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:11554173
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:11353865
RGD:11554173
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:2293125
G Ca3 carbonic anhydrase 3 JBrowse link 2 88,126,519 88,136,063 RGD:11554173
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase JBrowse link 6 26,657,507 26,680,459 RGD:5132586
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:11554173
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:2315991
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2289139
RGD:11554173
G Ccndbp1 cyclin D1 binding protein 1 JBrowse link 3 112,951,065 112,961,620 RGD:11554173
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5491179
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:11554173
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662309
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Cps1 carbamoyl-phosphate synthase 1 JBrowse link 9 74,113,437 74,236,274 RGD:2303406
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:11554173
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:7296954
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:11554173
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 JBrowse link 1 147,236,480 147,307,988 RGD:11554173
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:11554173
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 JBrowse link 1 83,933,974 83,947,804 RGD:11554173
G Dhodh dihydroorotate dehydrogenase (quinone) JBrowse link 19 42,066,103 42,087,906 RGD:5132618
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133686
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:11252158
G F12 coagulation factor XII JBrowse link 17 9,736,577 9,744,420 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:11554173
G Foxm1 forkhead box M1 JBrowse link 4 161,685,236 161,697,633 RGD:11554173
G Gjb1 gap junction protein, beta 1 JBrowse link X 71,272,030 71,279,973 RGD:7349398
RGD:11554173
G Gjb2 gap junction protein, beta 2 JBrowse link 15 37,377,313 37,394,494 RGD:7349398
G Glul glutamate-ammonia ligase JBrowse link 13 71,331,052 71,340,207 RGD:11554173
G Grp gastrin releasing peptide JBrowse link 18 61,563,458 61,576,818 RGD:11554173
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:2317823
RGD:11554173
G H19 H19, imprinted maternally expressed transcript (non-protein coding) JBrowse link 1 215,744,404 215,747,080 RGD:1342455
G Hat1 histone acetyltransferase 1 JBrowse link 3 58,022,395 58,070,067 RGD:2316578
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
G Htr2c 5-hydroxytryptamine receptor 2C JBrowse link X 118,084,520 118,318,040 RGD:1624998
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:10402567
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:2311623
RGD:2311630
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link X 156,254,187 156,280,046 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:2306052
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:11554173
G Kat6a lysine acetyltransferase 6A JBrowse link 16 73,942,669 74,020,750 RGD:2312274
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2306052
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:11554173
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:11554173
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:11554173
G Mfge8 milk fat globule EGF and factor V/VIII domain containing JBrowse link 1 140,845,478 140,860,882 RGD:11554173
G Mir10a microRNA 10a JBrowse link 10 84,165,950 84,166,059 RGD:11554173
G Mir125a microRNA 125a JBrowse link 1 59,704,827 59,704,911 RGD:11554173
G Mir145 microRNA 145 JBrowse link 18 56,969,907 56,969,994 RGD:11554173
G Mir151 microRNA 151 JBrowse link 7 114,485,547 114,485,643 RGD:11554173
G Mir181c microRNA 181c JBrowse link 19 25,290,211 25,290,316 RGD:11554173
G Mir181d microRNA 181d JBrowse link 19 25,290,051 25,290,133 RGD:11554173
G Mir183 microRNA 183 JBrowse link 4 57,463,569 57,463,678 RGD:11554173
G Mir186 microRNA 186 JBrowse link 2 263,873,759 263,873,844 RGD:11554173
G Mir18a microRNA 18a JBrowse link 15 100,180,015 100,180,110 RGD:11554173
G Mir195 microRNA 195 JBrowse link 10 56,845,301 56,845,387 RGD:11554173
G Mir196b microRNA 196b JBrowse link 4 82,199,056 82,199,140 RGD:11554173
G Mir200b microRNA 200b JBrowse link 5 173,490,144 173,490,238 RGD:11554173
G Mir206 microRNA 206 JBrowse link 9 26,791,764 26,791,847 RGD:11554173
G Mir212 microRNA 212 JBrowse link 10 62,014,702 62,014,812 RGD:11554173
G Mir221 microRNA 221 JBrowse link X 3,684,480 3,684,588 RGD:11554173
G Mir26a microRNA 26a JBrowse link 8 127,714,441 127,714,530 RGD:11554173
G Mir26b microRNA 26b JBrowse link 9 81,675,275 81,675,359 RGD:11554173
G Mir290 microRNA 290 JBrowse link 1 64,538,705 64,538,785 RGD:11554173
G Mir300 microRNA 300 JBrowse link 6 133,874,152 133,874,230 RGD:11554173
G Mir301a microRNA 301a JBrowse link 10 74,417,746 74,417,845 RGD:11554173
G Mir30a microRNA 30a JBrowse link 9 29,542,635 29,542,705 RGD:11554173
G Mir30b microRNA 30b JBrowse link 7 109,282,662 109,282,747 RGD:11554173
G Mir30d microRNA 30d JBrowse link 7 109,286,463 109,286,544 RGD:11554173
G Mir30e microRNA 30e JBrowse link 5 139,702,872 139,702,963 RGD:11554173
G Mir324 microRNA 324 JBrowse link 10 56,621,126 56,621,208 RGD:11554173
G Mir331 microRNA 331 JBrowse link 7 34,881,095 34,881,190 RGD:11554173
G Mir336 microRNA 336 JBrowse link 10 35,349,756 35,349,851 RGD:11554173
G Mir339 microRNA 339 JBrowse link 12 17,369,002 17,369,097 RGD:11554173
G Mir347 microRNA mir-347 RGD:11554173
G Mir349 microRNA 349 JBrowse link 7 130,146,518 130,146,614 RGD:11554173
G Mir34a microRNA 34a JBrowse link 5 167,092,491 167,092,592 RGD:11554173
G Mir352 microRNA mir-352 RGD:11554173
G Mir383 microRNA 383 JBrowse link 16 57,519,675 57,519,748 RGD:11554173
G Mir409 microRNA 409 JBrowse link 6 133,893,419 133,893,495 RGD:11554173
G Mir429 microRNA 429 JBrowse link 5 173,488,331 173,488,415 RGD:11554173
G Mir598 microRNA 598 JBrowse link 15 47,057,496 47,057,574 RGD:11554173
G Mir652 microRNA 652 JBrowse link X 114,002,534 114,002,614 RGD:11554173
G Mir671 microRNA 671 JBrowse link 4 7,108,747 7,108,827 RGD:11554173
G Mir708 microRNA 708 JBrowse link 1 161,221,246 161,221,333 RGD:11554173
G Mir760 microRNA 760 JBrowse link 2 225,873,354 225,873,433 RGD:11554173
G Mir92b microRNA 92b JBrowse link 2 188,541,034 188,541,116 RGD:11554173
G Mir98 microRNA 98 JBrowse link X 21,583,875 21,583,982 RGD:11554173
G Mir99b microRNA 99b JBrowse link 1 59,704,216 59,704,285 RGD:11554173
G Mirlet7b microRNA let-7b JBrowse link 7 126,590,627 126,590,711 RGD:11554173
G Mirlet7d microRNA let-7d JBrowse link 17 16,419,980 16,420,077 RGD:11554173
G Mirlet7i microRNA let-7i JBrowse link 7 66,802,731 66,802,815 RGD:11554173
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2325736
RGD:11554173
RGD:2325734
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325736
RGD:2325734
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:11554173
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:10059623
RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:2325277
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2325310
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:13442478
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:14701032
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 JBrowse link 13 89,585,072 89,591,278 RGD:11554173
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:14975105
G Pemt phosphatidylethanolamine N-methyltransferase JBrowse link 10 46,339,821 46,404,640 RGD:1642378
G Pml PML nuclear body scaffold JBrowse link 8 63,002,515 63,034,310 RGD:11554173
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link 14 33,580,541 33,614,919 RGD:11554173
G Ppp2ca protein phosphatase 2 catalytic subunit alpha JBrowse link 10 37,534,449 37,554,861 RGD:8693574
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:11554173
G Ptgr1 prostaglandin reductase 1 JBrowse link 5 76,110,746 76,129,361 RGD:14401713
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:2292638
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:11554173
G Rgn regucalcin JBrowse link X 1,833,484 1,848,904 RGD:11554173
G Rida reactive intermediate imine deaminase A homolog JBrowse link 7 73,256,506 73,270,308 RGD:9685719
G Rras2 RAS related 2 JBrowse link 1 178,940,515 179,010,257 RGD:11554173
G Rrm1 ribonucleotide reductase catalytic subunit M1 JBrowse link 1 167,538,387 167,562,688 RGD:2316863
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1643105
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:1626391
G Slc31a1 solute carrier family 31 member 1 JBrowse link 5 78,222,504 78,249,358 RGD:11554173
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:11554173
G Sox4 SRY-box transcription factor 4 JBrowse link 17 37,615,022 37,619,728 RGD:11554173
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:11554173
G Sqle squalene epoxidase JBrowse link 7 99,609,929 99,624,803 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:11554173
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:2317490
RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
G Tk1 thymidine kinase 1 JBrowse link 10 106,817,556 106,828,888 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
RGD:14696818
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Tsc22d1 TSC22 domain family, member 1 JBrowse link 15 58,554,358 58,658,156 RGD:11554173
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480440
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:13210515

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15984
    disease of cellular proliferation 5886
      Experimental Neoplasms 602
        Experimental Liver Neoplasms 183
Path 2
Term Annotations click to browse term
  disease 15984
    disease of anatomical entity 15262
      gastrointestinal system disease 4592
        hepatobiliary disease 2462
          liver disease 2371
            Liver Neoplasms 944
              Experimental Liver Neoplasms 183
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.