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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Fungemia
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Accession:DOID:9001228 term browser browse the term
Definition:The presence of fungi circulating in the blood. Opportunistic fungal sepsis is seen most often in immunosuppressed patients with severe neutropenia or in postoperative patients with intravenous catheters and usually follows prolonged antibiotic therapy.
Synonyms:exact_synonym: Fungemias
 primary_id: MESH:D016469;   RDO:0006958
For additional species annotation, visit the Alliance of Genome Resources.


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Fungemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD274 CD274 molecule treatment ISO RGD PMID:23663657 RGD:40818234 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566
JBrowse link
G PDCD1 programmed cell death 1 treatment ISO protein:increased expression:CD4 Tcell, CD8 Tcell: RGD PMID:23663657, PMID:23663657 RGD:40818234, RGD:40818234 NCBI chr 2:241,849,881...241,858,908
Ensembl chr 2:241,849,884...241,858,894
JBrowse link
Candidemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB2 EPH receptor B2 exacerbates ISO RGD PMID:33685996 RGD:127229905 NCBI chr 1:22,710,770...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 20158
    syndrome 8992
      Systemic Inflammatory Response Syndrome 378
        Sepsis 376
          Fungemia 3
            Candidemia 1
Path 2
Term Annotations click to browse term
  disease 20158
    Pathological Conditions, Signs and Symptoms 11385
      Pathologic Processes 7460
        Shock 396
          Systemic Inflammatory Response Syndrome 378
            Sepsis 376
              Fungemia 3
                Candidemia 1
paths to the root